presentation, part 1 - Molecular Evolution

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Bayesian age estimates:• <strong>part</strong>ition-specificparameters• F84 + (• Microcebussurprisingly old• Age estimate forloris/galagodivergence twice asold as expectedMicrocebus10.0 MaLoris/Galago40.5 Ma
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How to Study an Island (Madagascar)
Page 3 and 4:
Using Tree Thinking to Reconstructt
Page 5 and 6:
Rush hour traffic in Madagascar
Page 8 and 9:
Imbalance & Endemism in !Madagascar
Page 11 and 12:
Dr. Chris Scotese (Arizona State)Th
Page 13 and 14:
Vicariance?(“paleo-endemics”)Di
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(i.e., the end of the“age of dino
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Montane rainforest!(Annual rainfall
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Has central plateau served as a bar
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1! 2! 3!10 mya (+1.8)1! 2! 3!9.2 my
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Human Impact:- Humans arrived in Ma
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So what are we going to doabout it?
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Rodents
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LEMURS!!LEMURS!!
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Photo by David Haring
Page 35 and 36:
Photo by Franz Lanting
Page 37 and 38: Photo by me
Page 39 and 40: Photo by David Haring
Page 41 and 42: Ascending Pharyngeal Artery!
Page 43 and 44: Genetic Consensus of Strepsirrhine
Page 45 and 46: Archaeoindris!Mouse lemur!
Page 47: Office!Main lab!Thermocycler!Gel el
Page 51 and 52: Megaladapis cytochrome b sequences
Page 53: Extinct &Extant lemursform a cladeA
Page 57 and 58: Single dispersal:lemurs (Yoder et a
Page 59 and 60: “Hard” polytomy versus “Soft
Page 61 and 62: Lineage SortingComplete Lineage Sor
Page 63 and 64: Developing New Lemur-Specific Loci
Page 65 and 66: 22 out of 25 nodeshave bootstrapsup
Page 67 and 68: “Ignoring temporal information ob
Page 69 and 70: What is the Molecular Clock Hypothe
Page 71 and 72: Raw Genetic Differences"Species 1:
Page 73 and 74: The Molecular ClockThe Present0.10s
Page 75 and 76: The Molecular ClockThe Present0.022
Page 77 and 78: T3C2C1T2T1Rate and Time are confoun
Page 79 and 80: General Time Reversible (6-paramete
Page 81 and 82: Monkey! Human!Whale! Hippo!TimeUsin
Page 83 and 84: We need a method that …!• allow
Page 85 and 86: Major Innovation …• Both method
Page 87: Parameter Estimates by Data Partiti
Page 91: ~40 Ma!
Page 94 and 95: Excellent data quality; very good t
Page 96 and 97: Good data quality; poor taxon sampl
Page 98 and 99: Table 4 Posterior means and 95% cre
Page 100 and 101: Table 4 Posterior means and 95% cre
Page 102 and 103: Ancestral lemur(~62 mya)C3N10N9C7N1
Page 104 and 105: 0°30°62 mya
Page 106 and 107: Dust from the impact blocked sunlig
Page 108 and 109: David A. Kring and Daniel D. Durda,
Page 110 and 111: David A. Kring and Daniel D. Durda,
Page 112 and 113: So, how the heck did they getthere
Page 114 and 115: Carnivorans
Page 116 and 117: present10Malagasy !carnivorans!(24
Page 118 and 119: Mammals & BirdsK/T BoundaryBPI Herp
Page 120 and 121: Preponderance of sistergroupsare fo
Page 122 and 123: Very deep DeepestAli & Huber, Natur
Page 124 and 125: Reconstructed Indian Ocean currents
Page 126: Coffee Anyone???
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