Image to Finite Element Mesh: An End to End Workflow - 3D Slicer

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Loading Image Data1. Select the Slicer3Volume Module2. Select the “VolumeFile” button to choosea file from thefilesystem. Manyimage formats aresupported.3. Hit “Apply” to read theimage into the currentsessionNational Alliance for Medical Image Computinghttp://na-mic.org © 2010, ARR
Creating a Labelmap• A label map is a special type of volume whereeach voxel contains a code indicating theobject to which the voxel belongs• Label maps are loaded and saved like images,but handled differently by Slicer because oftheir purposes as indicators• At right, we see a label map indicating thepresence of the finger bone superimposed overcorresponding background voxels from a CTimage of the finger11National Alliance for Medical Image Computinghttp://na-mic.org © 2010, ARR
Page 1 and 2: NA-MICNational Alliance for Medical
Page 3 and 4: Pre-requisites• This tutorial ass
Page 5 and 6: Material• This tutorial requires
Page 7 and 8: Material• Interactive screencasts
Page 9: OverviewIn this tutorial, we will
Page 13 and 14: Creating a Label map• Select the
Page 15 and 16: Smoothing the Label• After editin
Page 17 and 18: Smooth Even More?• The Surface To
Page 19 and 20: Importing a Surface Model• Any Mo
Page 21 and 22: Creating a Building Block1. Select
Page 24 and 25: Creating a Mesh• The surface impo
Page 26 and 27: Assigning Mesh Seeds (2)3. Select t
Page 28 and 29: Check Mesh Quality• Once mesh cre
Page 30 and 31: Checking Mesh Quality (2)3. Select
Page 32 and 33: Improving Mesh Quality1. Select the
Page 34 and 35: After Mesh Generation• After mesh
Page 36 and 37: Material Properties (2)Element Set
Page 38 and 39: Assigning Material Properties• Vi
Page 40 and 41: Load and Boundary Conditions (2)5.
Page 42 and 43: Load and Boundary Conditions (4)14.
Page 44 and 45: • Save the FE Mesh1. Select Save
Page 46 and 47: Conclusion• It is now possible to

Image to Finite Element Mesh: An End to End Workflow - 3D Slicer

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