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LNCS 2950 - Aspects of Molecular Computing (Frontmatter Pages)

LNCS 2950 - Aspects of Molecular Computing (Frontmatter Pages)

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116 Erzsébet Csuhaj-Varjú and Arto Salomaa<br />

We have indicated by boldface the words not obtained by a complementarity<br />

transition.<br />

The beginning <strong>of</strong> the road <strong>of</strong> the first component is<br />

110110110110011 ...<br />

Denote by rj,j ≥ 1, the jth bit in the road.<br />

Consider the increasing sequence <strong>of</strong> numbers, consisting <strong>of</strong> the positive powers<br />

<strong>of</strong> 2 and 5:<br />

2, 4, 5, 8, 16, 25, 32, 64, 125, 128, 256, 512, 625, 1024,...<br />

For j ≥ 1, denote by mj the jth number in this sequence.<br />

The next two lemmas are rather immediate consequences <strong>of</strong> the definitions<br />

<strong>of</strong> the sequences rj and mj.<br />

Lemma 1 The road <strong>of</strong> the first component begins with 11 and consists <strong>of</strong> occurrences<br />

<strong>of</strong> 11 separated by an occurrence <strong>of</strong> 0 or an occurrence <strong>of</strong> 00.<br />

The distribution <strong>of</strong> the occurrences <strong>of</strong> 0 and 00 depends on the sequence mj:<br />

Lemma 2 For each j ≥ 1, rj = rj+1 =0exactly in case mj =2mj−1 =4mj−2.<br />

The next lemma is our most important technical tool.<br />

Lemma 3 The bits rj in the road <strong>of</strong> the first component do not constitute an<br />

ultimately periodic sequence.<br />

Pro<strong>of</strong> <strong>of</strong> Lemma 3. Assume the contrary. By Lemma 2 we infer the existence <strong>of</strong><br />

two integers a (initial mess) andp (period) such that, for any i ≥ 0, the number<br />

<strong>of</strong> powers <strong>of</strong> 2 between 5 a+ip and 5 a+(i+1)p is constant, say q. Let2 b be the<br />

smallest power <strong>of</strong> 2 greater than 5 a .Thus,<br />

and, for all i ≥ 1,<br />

Denoting α =<br />

5 a < 2 b < 2 b+1

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