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Annual Report 2011 - Center for Advanced Biotechnology and ...

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Dr. Isaac Edery<br />

CABM Resident Faculty Member<br />

Professor<br />

Department of Molecular Biology<br />

<strong>and</strong> Biochemistry<br />

Rutgers University<br />

Dr. Rudra Dubey<br />

Asst. Research Professor<br />

Dr. Weihuan Cao<br />

Research Assistant<br />

Dr. Kwang Huei Low<br />

Research Assistant<br />

Evrim Yildirim<br />

Graduate Student<br />

Chhaya Dharia<br />

Lab Researcher<br />

Molecular Chronobiology Laboratory<br />

Dr. Isaac Edery completed his doctoral studies in biochemistry as a Royal<br />

Canadian Cancer Research Fellow under Dr. Nahum Sonenberg at McGill<br />

University in Montreal. His Ph.D. research focused on the role of the<br />

eukaryotic mRNA cap structure during protein synthesis <strong>and</strong> precursor<br />

mRNA splicing. Subsequently, he was in the laboratory of Dr. Michael<br />

Rosbash at Br<strong>and</strong>eis University where he pursued postdoctoral studies<br />

aimed at underst<strong>and</strong>ing the time-keeping mechanism underlying circadian<br />

clocks. He joined CABM in 1993, <strong>and</strong> his research is supported by NIH. Dr.<br />

Edery is a member of the editorial board of Chronobiology International <strong>and</strong><br />

Journal of Biological Rhythms.<br />

The main focus of the Edery lab is to underst<strong>and</strong> the biochemical <strong>and</strong> cellular bases<br />

underlying circadian (~24 hr) rhythms, using Drosophila as a model system. Our<br />

strength lies in applying biochemical strategies that are integrated with genetic,<br />

ecological <strong>and</strong> evolutionary perspectives to underst<strong>and</strong> how circadian clocks<br />

function <strong>and</strong> regulate animal physiology <strong>and</strong> behavior. Circadian rhythms are driven<br />

by cellular clocks <strong>and</strong> enable organisms to anticipate daily <strong>and</strong> seasonal changes in<br />

environmental conditions, ensuring activities occur at optimal times in the day <strong>and</strong><br />

appropriate seasonal responses are elicited. Underst<strong>and</strong>ing how clocks function is<br />

highly relevant <strong>for</strong> human health <strong>and</strong> well-being. Indeed, clock malfunctions in<br />

humans have been implicated in many diseases, including manic-depression, cancer,<br />

sleep problems <strong>and</strong> metabolic syndromes. Our lab is investigating the core clock<br />

mechanism, identifying novel clock proteins <strong>and</strong> how they interact to build a<br />

biological time-keeping device that is synchronized to local time. In a second major<br />

ef<strong>for</strong>t, we are determining the role of clocks in seasonal adaptation, which has led to<br />

novel ecological <strong>and</strong> evolutionary implications. These studies have also broadened<br />

our research scope by revealing mechanisms that regulate sleep <strong>and</strong> arousal. In<br />

addition, we are investigating how environmental stimuli, most notably temperature,<br />

controls global gene expression. Below is a brief summary of some of our ongoing<br />

research <strong>and</strong> future directions<br />

Mechanisms underlying circadian clocks: The central clock mechanism is a<br />

dynamically changing multi-subunit biochemical oscillator based on a small set of<br />

interacting core “clock” proteins <strong>and</strong> auxiliary factors that as a unit generates a selfperpetuating<br />

daily transcriptional feedback loop that also drives global cyclical gene<br />

expression, which underlies many of the daily rhythms manifested by organisms. In<br />

addition, to the transcriptional architecture, numerous post-translational regulatory<br />

pathways, most notably reversible phosphorylation, regulate various aspects of clock<br />

8

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