Intel(R) - Computational and Systems Biology at MIT
Intel(R) - Computational and Systems Biology at MIT
Intel(R) - Computational and Systems Biology at MIT
You also want an ePaper? Increase the reach of your titles
YUMPU automatically turns print PDFs into web optimized ePapers that Google loves.
Working with <strong>Intel</strong>® M<strong>at</strong>h Kernel Library Cluster Software 9/opt/intel_mpi_10/bin/mpiifort \-L/opt/intel/mkl/10.0.xxx/lib/64 \-lmkl_cdft_core \-lmkl_blacs_intelmpi_ilp64 \-lmkl_intel_lp64 –lmkl_intel_thread –lmkl_core \-lguide -lpthreadA binary linked with ScaLAPACK runs in the same way as any other MPI applic<strong>at</strong>ion (Forinform<strong>at</strong>ion, refer to the document<strong>at</strong>ion th<strong>at</strong> comes with the MPI implement<strong>at</strong>ion). Forinstance, the script mpirun is used in case of MPICH 1.2.x <strong>and</strong> OpenMPI, <strong>and</strong> a number ofMPI processes is set by -np. In case of MPICH 2.0 <strong>and</strong> all <strong>Intel</strong> MPIs, you should start thedaemon before running an applic<strong>at</strong>ion; the execution is driven by the script mpiexec.For further linking examples, see the <strong>Intel</strong> MKL support website <strong>at</strong>http://www.intel.com/support/performancetools/libraries/mkl/.9-5
Change language