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Principles and Practical Aspects of Preparative Liquid Chromatography

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It is common practice to combine the signals <strong>of</strong> the non-selective UV <strong>and</strong><br />

selective mass detector to trigger fraction collection. The highest purity<br />

is ensured by applying Boolean AND logic. The UV signal as the principal<br />

signal is better resolved than the mass signal. Therefore the purity <strong>of</strong> the<br />

collected fractions will increase when the better-resolved signal is used to<br />

control fraction triggering. The selectivity factor is added by the mass signal.<br />

Charged droplet<br />

Evaporation<br />

Coulombic explosion<br />

Heat<br />

Heat or<br />

vacuum<br />

Analyte ions<br />

Figure 3.40 The electrospray Ionization process. After evaporation <strong>of</strong> the solvent the<br />

charge density inside the droplet is increased until free ions are ejected into the gas phase.<br />

The ionization process is affected by the volume <strong>of</strong> eluate which has to be vaporized <strong>and</strong><br />

the concentration <strong>of</strong> buffers or matrix compounds within the droplets which suppress the<br />

ionization process.<br />

The mass <strong>of</strong> the target compound can be obtained from analytical LC/MS<br />

results or predicted through synthesis planning. This enables triggering <strong>of</strong><br />

fraction collection with a mass-selective (MS) detector with unmatched<br />

productivity. Unless multiple isomers occur <strong>and</strong> elute at different times<br />

this approach results in a very limited number <strong>of</strong> fractions, if not just a<br />

single fraction. Analysis <strong>of</strong> fraction purity <strong>and</strong> pooling requires much less<br />

effort. However, ionization <strong>of</strong> the target compound has to be assured<br />

under the chromatographic conditions to make the target detectable with<br />

a mass-selective detector. The usage <strong>of</strong> mono-isotopic (not average)<br />

masses is crucial to be successful. The s<strong>of</strong>tware should allow entering<br />

the total sum formula <strong>and</strong> the adduct information. The sum <strong>of</strong> the target<br />

mass <strong>and</strong> the adduct ion equals the trigger ion by which the MS detector<br />

triggers fraction collection. When a combination <strong>of</strong> UV or ELS detectors<br />

is used with the MS detector, the delay time has to be considered for<br />

synchronization <strong>of</strong> the detector signals. In this case, the fraction delay<br />

sensor measures the different delay volumes <strong>and</strong> ensures maximum purity<br />

<strong>and</strong> recovery.<br />

40

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