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Principles and Practical Aspects of Preparative Liquid Chromatography

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3.5.7 Collecting fractions<br />

using multiple detector<br />

configurations<br />

3.6 Recovery<br />

collection<br />

When multiple detectors are configured in a purification system, fraction<br />

triggering has to be set up properly <strong>and</strong> several ways <strong>of</strong> decision making<br />

are possible. A universal interface box can pick up signals from a variety<br />

<strong>of</strong> detectors. Fractions can be collected when either one or more detectors<br />

recognize an eluting peak. Boolean AND/OR logic is available for this step.<br />

The objective <strong>of</strong> any purification task is to collect all compounds <strong>of</strong> interest<br />

based on identification by retention time, UV signal intensity at a specific<br />

wavelength, or abundance <strong>of</strong> target mass. There can be several possible<br />

reasons for the compounds <strong>of</strong> interest not being collected:<br />

• Improper fraction collection settings, for example,<br />

target mass, or lower <strong>and</strong> upper threshold<br />

• Lack <strong>of</strong> ionization in the mass-selective detector<br />

• Improper selection <strong>of</strong> methods such as in<br />

a walk-up environment<br />

• Mechanical failure or s<strong>of</strong>tware error<br />

To avoid complete loss <strong>of</strong> a sample, more <strong>and</strong> more purification systems<br />

are equipped with sample recovery locations or dedicated recovery<br />

fraction collectors connected to the waste line <strong>of</strong> the primary fraction<br />

collector, see Figure 3.45. For each sample there should preferably be<br />

a separate container available to collect what is expected to be waste.<br />

The recovery position together with the sample information must be<br />

reported. This ensures you are able to return the entire sample back to<br />

whoever submitted the sample for purification.<br />

Fractions<br />

Recovery<br />

Figure 3.45 Recovery collection – the volume <strong>of</strong> solvent not collected<br />

by the main fraction collector is captured by the recovery collector.<br />

44

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