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Chem3D Users Manual - CambridgeSoft

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Administrator<br />

provides a balance between speed and accuracy.<br />

Other methods are provided that are either fast and<br />

less accurate, or slow but more accurate.<br />

What’s New in<br />

<strong>Chem3D</strong> 9.0<br />

<strong>Chem3D</strong> 9.0 is enhanced by the following features:<br />

• Redesigned GUI—User customizable, with<br />

new toolbars, new layout for tables and<br />

subviews, new menus and dialogs. The GUI<br />

has been redesigned from the ground up to<br />

make it more usable.<br />

• New Model Hierarchy Tree Control—Lets<br />

you open and close fragments, chains, or<br />

groups; change display properties at different<br />

levels. See “Working With the Model Explorer”<br />

on page 111.<br />

• ChemDraw panel—Building small molecules<br />

is easier than ever. See “Building with the<br />

ChemDraw Panel” on page 74.<br />

• New menu organization—Important<br />

functions are easier to locate.<br />

• Full screen mode—Use <strong>Chem3D</strong> for demos<br />

or instruction.<br />

• New Dihedral Driver—Do conformation<br />

analysis with graphical display of results. See<br />

“Tutorial 5: Mapping Conformations with the<br />

Dihedral Driver” on page 42.<br />

• Improved support for small molecule<br />

overlays—compare different conformations<br />

or different structures. See “Tutorial 6:<br />

Overlaying Models” on page 43.<br />

• XML table editor—easier to use, better<br />

integration.<br />

What’s New in <strong>Chem3D</strong><br />

9.0.1<br />

• View translation tool—translate (pan) the<br />

view without changing the model coordinates.<br />

See “Moving Models with the Translate Tool”<br />

on page 96.<br />

• Safer viewing—new “pure selection tool”<br />

prevents unintentionally moving or rotating<br />

parts of the model while selecting. See “The<br />

Building Toolbar” on page 20.<br />

• Global keyboard modifiers—advanced users<br />

can perform any action while in any mode<br />

using a global keyboard modifier. See<br />

“Keyboard Modifiers” on page 235.<br />

• Improved Zoom control—zoom to center of<br />

screen, center of selection, or center of<br />

rotation. See “Zoom and Translate” on page<br />

235.<br />

• Display axes—display or hide axes centered at<br />

the origin of the model, or at the origin of the<br />

view focus.<br />

• Middle mouse button and scroll wheel<br />

support—use scroll wheel to zoom, middle<br />

mouse button to rotate or translate. See entries<br />

under “Rotation” and “Zoom and Translate”<br />

on page 235.<br />

• New tools for large models:<br />

• View focus—selects a subset of the model<br />

for viewing and manipulation. See “View<br />

Focus” on page 85.<br />

• Select higher group—double click a<br />

selection to select the next higher group. See<br />

“Selecting a Group or Fragment” on page<br />

93.<br />

• Radial Selection—select atoms or groups<br />

within a specified radius. See “Selecting<br />

Atoms or Groups by Distance” on page 94.<br />

10 •Introduction <strong>CambridgeSoft</strong><br />

What’s New in <strong>Chem3D</strong> 9.0

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