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Gene Cloning

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56 <strong>Gene</strong> <strong>Cloning</strong><br />

(a) (b) (c)<br />

Ap r<br />

lacZ'<br />

MCS<br />

Ap r<br />

pUC18<br />

Ap r<br />

Ap r resistant lac negative<br />

(d)<br />

Ap r<br />

lacZ'<br />

Cut with restriction enzyme<br />

Mix and ligate<br />

Ap r and lac positive<br />

Figure 3.14a In a cloning experiment using insertional inactivation of lacZ′ in<br />

pUC18 the plasmid and genomic DNAs a) are cut with a restriction enzyme<br />

which cuts in the multiple cloning site (MCS), and then are mixed and ligated b).<br />

In successful recombinants, lacZ′ will be non-functional because it has been<br />

interrupted by the cloned fragment c); if the vector recircularizes the lacZ′ gene<br />

will be functional and β-galactosidase will be produced.<br />

Recombinant clones can be identified<br />

because they are lac minus, there is<br />

no need for replica plating<br />

Agar contains ampicillin,<br />

X-gal and IPTG<br />

Figure 3.14b Recombinant clones can be identified because they do not express<br />

β-galactosidase, and hence they will be white on plates containing X-gal and<br />

IPTG. Colonies containing recircularized vector will be blue.<br />

the rest of the enzyme (Box 3.4). Both the α peptide and the rest of the β-<br />

galactosidase enzyme are required for activity. The multiple cloning site in<br />

pUC18 is in the middle of the lacZ′ gene so cloning into it will result in<br />

insertional inactivation of the gene and the resulting clones will be unable<br />

to break down X-gal. These recombinant clones will be white, and are easily<br />

distinguishable from those containing the recircularized vector, which<br />

will be blue (Figure 3.14a and b).

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