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Tour-de-Force: Interplay between Mitochondria and Cell Cycle Progression Fall 2007ReferencesAdachi T., Fukushima, T., Usami, Y. and Hirano, K. (1993) “Binding of human xanthine oxidase to sulphated glycosamino glycans onthe endothelial cell surface.” Biochemistry Journal 289: 523- 527.Bae YS, Kang SW, Seo MS, Baines IC, Tekle E, Chock PB et al. (1997) ‘’Epidermal growth factor (EGF)-induced generation ofhydrogen peroxide. Role in EGF receptormediated tyrosine phosphorylation’’, J Biol Chem 272: 217–221.Boonstra, J. (2003) ‘’Progression through the G1-phase of the on-going cell cycle.’’ J. Cell. Biochem. 90: 244–252.Boonstra, J., Post, J.A. (2004) “Molecular events associated with reactive oxygen species and cell cycle progression in mammaliancells.” Gene 337: 1-13.Boveris A, Chance B., (1973) “The mitochondrial generation of hydrogen peroxide. General properties and effect of hyperbaricoxygen.” Biochem J. 134:707–16.Boveris, A. et al. (2006) “Mitochondrial metabolic states regulate nitric oxide and hydrogen peroxide diffusion to the cytosol.”Biochimica et Biophysica Acta 1757: 535-542Brar SS, Kennedy TP, Whorton AR, Murphy TM, Chitano P, Hoidal JR. (1999) “Requirement for reactive oxygen species in seruminducedand platelet-derived growth factorinduced growth of airway smooth muscle.” J Biol Chem 274: 20017–20026.Burch, P.M., and N.H. Heintz. (2005) “Redox regulation of cell-cycle re-entry: cyclin D1 as a primary target for the mitogenic effectsof reactive oxygen and nitrogen species.” Antioxid. Redox Signal. 7:741–751.Chance B, Williams GR (1956) “The respiratory chain and oxidative phosphorylation.” Adv.Enzymol. 17: 65-134Chen, Z. et al. (2007) “Restriction of DNA Replication to the Reductive Phase of the Metabolic Cycle protects Genome Integrity.”Science 316: 1916-1919Conour, J.E., Graham, W.V., and H.R. Gaskins. (2004) “A combined invitro/bioinformatic investigation of redox regulatorymechanisms governing cell cycle progression”. Phyiosol Genomics 18: 196-205.Daugherty, A., Dunn, J.L., Rateri, D.L., Heinecke, J.W. (1994) “Myeloperoxidase, a catalyst for lipoprotein oxidation, is expressed inhuman atherosclerotic lesions.” Journal of Clinical Investigation 94(1):437-44.De Duve, C., Baudhuin, P. (1966) “Peroxisomes (microbodies and related particles).” Physiological Review 46: 323–357.Dröge W. (2002) “Free radicals in the physiological control of cell function.” Physiol Rev. 82:47–95.Erich A. Nigg. (2001) “Mitotic Kinases as Regulators of Cell Division and its Checkpoints.” Nature Reviews 2: 21-32.Finkel, T., Holbrook, N.J. (2000) ”Oxidants, oxidative stress and the biology of ageing.” Nature 408: 239–247.Foster et al. (2006) “Optical and pharmacological tools to investigate the role of mitochondria during oxidative stress andneurodegeneration”. Progressive neurobiology 79:136-171Gnaiger, E. (2007) “MitoPathways: respiratory states and flux control ratio’s”. Mitochondrial Physicology Network 12.15: 1-9.Hames, R.S., S.L. Wattam, H. Yamano, R. Bacchieri, A.M. Fry (2001) “APC/C-mediated destruction of the centrosomal kinaseNek2A occurs in early mitosis and depends upon a cyclin A-type D-box.” The Embo Journal 20: 7117-7127.Harborth, J., S.M. Elbashir, L. Berchert, T. Tuschl and K. Weber (2001) ”Identification of essential genes in cultured mammalian cellsusing small interfering RNAs.” J Cell Sci 114: 4557–4565.Havens, C. G., A. Ho, Yoshioka, N., and Dowdy, S. F. (2006) “Regulation of Late G1/S Phase Transition and APC by ReactiveOxygen Species.” Mol. Cell. Biol. 26: 4701–4711.Hendzel, M.J., Y. Wei, M. A. Mancini, et al. (1997) “Mitosis-specific phosphorylation of histone H3 initiates primarily withinpericentromeric heterochromatin during G2 and spreads in an ordered fashion coincident with mitotic chromosome condensation”.Chromosoma. 106:348-360.Jahngen-Hodge J, Obin MS, Gong X, Shang F, Nowell Jr TR, Gong J et al. (1997) “Regulation of ubiquitin-conjugating enzymes byglutathione following oxidative stress.” J Biol Chem 272: 28218–28226.Junn E, Lee KN, Ju HR, Han SH, Im JY, Kang HS et al. (2000) “Requirement of hydrogen peroxide generation in TGF-beta 1 signaltransduction in human lung fibroblast cells: involvement of hydrogen peroxide and Ca2+ in TGFbeta 1-induced IL-6 expression.” JImmunol 165: 2190–2197.Kakkar, P. and B.K. Singh (2007) “Mitochondria: a hub of redox activities and cellular distress control”. Molecular CellularBiochemistry. 305: 235-253Knapp LT, Klann E. (2000) “Superoxide-induced stimulation of protein kinase C via thiol modification and modulation of zinc content.”J Biol Chem 275: 24136–24145.Lee, S. et al. (2007) “Cell cycle-dependent mitochondrial biogenesis and dynamics in mammalian cells”. Biochemical and biophysicalresearch communications 357: 111-117SCI 332 Advanced Molecular Cell Biology Research Proposal 34
Tour-de-Force: Interplay between Mitochondria and Cell Cycle Progression Fall 2007Lida, R. et al. (2003) “M -LP, Mpv17-like protein, has a peroxisomal membrane targeting signal comprising a transmembrane domainand a positively charged loop and up-regulates expression of the manganese superoxide dismutase gene.” Journal BiologicalChemistry 278: 6301–6306.Lloyd, D., Murray, D.B. (2007) “Redox rhythmicity: clocks at the core of temporal coherence”. BioEssays 29: 465-473.Martinez-Diez, M. et al. (2006) “Biogenesis and dynamics of mitochondria during the cell cycle: significance of 3’UTRs” PLoS One1(1):e107Menon, S.G., P.C. Goswami (2007) “A redox cycle within the cell cycle: ring in the old with the new.” Oncogene 26: 1101-1109.Moore, J.D., J.A. Kirk and T. Hunt (2003) “Unmasking the S-phase-promoting potential of cyclin B1.” Science 300: 987–990.Morgan D.O (1999) “Regulation of the APC and the exit from mitosis.”Nature Cell Biology 1: E47-E53.Osbourn, D.M., R.H. Saner and P.J.S. Smith (2005) “Determination of single-cell oxygen consumption with impedance feedback forcontrol of sample-probe separation”. Analytical Chemistry 7: 6999-7004.Porterfield, M. (2006) “Measuring metabolism and biophysical flux in the tissue, cellular and sub-cellular domains: Recentdevelopments in self-referencing amperometry for physiological sensing.” Biosensors and Bioelectronics 22:1186–1196Rane, S.G., P. Dubus, R.V. Mettus, E.J. Galbreath, G. Boden E.P. Reddy (1999) ”Loss of Cdk4 expression causes insulin-deficientdiabetes and Cdk4 activation results in beta-islet cell hyperplasia.” Nat Genet 22: 44–52.Reed, Steven I. (2003) “Ratchets and Clocks: The Cell Cycle, Ubiquitylation and Protein Turnover.” Nature Reviews 4: 855-864.Reinke, H. And D. Gatfield (2006) “Genome-wide oscillation of transcription in yeast” Trends in biochemical sciences 31: 189-191Rhee S.G. (1999) “Redox signaling: hydrogen peroxide as intracellular messenger.” Exp Mol Med 31: 53–59.Sakamaki et al. (2006) “Cyclin D1 determines mitochondrial function in vivo”. Molecular and cellular biology 26: 5449-5469Sánchez I. and B.D. Dynlacht (2005) “New insights into cyclins, CDKs, and the cell cycle control.” Seminars in Cell & Developmentbiology 16: 311-321.Schafer, F.Q., Buettner, G.R. (2001) Redox environment of the cell as viewed through the redox state of the glutathionedisulfide/glutathione couple. Free Radical Biological Medicine 30: 1191–1212.Sudo, T., Y. Ota, S. Kotani, M. Nakao, Y. Takami, S. Takeda, H. Saya (2001) “Activation of Cdh1-dependent APC is required for G1cell cycle arrest and DNA damage-induced G2 checkpoint in vertebrate cells.” The Embo Journal 20: 6499-6508.Takahashi Y., Ogra Y., Suzuki K., (2004) “Synchronized generation of reactive oxygen species with the cell cycle”. Life sciences 75:301-311Teshima, Y., M. Akao, R. A.. Li, et al. (2003) “Mitochondrial ATP-sensitive potassium channel activation protects cerebellar granuleneurons from apoptosis induced by oxidative stress”. Stroke 34: 1796-1802.Tetsu, O., F. McCormick (2003) ”Proliferation of cancer cells despite CDK2 inhibition.” Cancer Cell 3: 233–245.Tsutsui, T., B. Hesabi, D.S. Moons, P.P. Pandolfi, K.S. Hansel and A. Koff et al (1999) “Targeted disruption of CDK4 delays cellcycle entry with enhanced p27 (Kip1) activity.” Mol Cell Biol 19: 7011–7019.Tu, B. P. et al. (2005) “Logic of the Yeast Metabolic Cycle: Temporal Compartmentalization of Cellular Processes.” Science 310:1152-1158Wang, C. et al. (2006) “Cyclin D1 repression of nuclear respiratory factor 1 integrates nuclear DNA synthesis and mitochondrialfunction”. PNAS 103: 11567–11572Zhou, Y., Y-P. Ching, W.M. Raymond, D-Y. Jin (2002) “The APC regulator CDH1 is essential for he progression of embryonic cellcycles in Xenopus.” Elsevier Science 294: 120-126.Zorov D., Filburn C., Klotz O., Zweier J., Sollott S. (2000) “Reactive Oxygen Species (ROS)-induced ROS Release: A NewPhenomenon Accompanying Induction of the Mitochondrial Permeability Transition in Cardiac Myocytes”. The Journal ofExperimental Medicine 192: 1001-1014Zwacka, R.M. et al. (1994) “The glomerulosclerosis gene Mpv17 encodes a peroxisomal protein producing reactive oxygen species”EMBO Journal 13: 5129–5134.SCI 332 Advanced Molecular Cell Biology Research Proposal 35
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