ChemDraw User's Manual - CambridgeSoft

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Inserting (continued)rows in tables 190Integral Groups, Creating 118Interface 13Internet, CambridgeSoft web site 225IR spectra, see spectraISISReactions 200SKC file format 200TGF file format 200Isotopesspecifications 235Isotopes Table file 155Isotopes text file 155Isotopic Abundance 154JJ. Mol. Mod.(1 Column) 256(2 Column) 256JCAMP file format 201JDX file format 201Joback’s Fragmentation Method 246Joiningstructures 117Joining Objects 117JPEG file format 201Justificationatom labels 82captions 81KKekule structures 67Keyboard shortcutsedit commands 250drawing commands 249, 251edit commands 247file commands 247, 249help commands 249object commands 248, 250Keyboard shortcuts (continued)structure commands 248, 251text commands 248, 251view commands 248, 250LLab supplies, purchasing online 224Labelsauto-update 74contracting 124expanding 125Landscape page orientation 180Lasso toolselecting objects 109toggling with Text Tool 89Layeringatom labels 86objects 185Layout, page 177Lewis dot symbol, see Lone Pair SymbolLigand, defined 237Limitations, name-to-structure 74Line Width 60Lines, drawing 101Link nodes 163List Nicknames command 124LogP 245Lone Pair Symbol 97Mm/z, displaying 139Magnifyingwith Magnification control 182with View menu 181Make Spectrum-Structure Assignment 146Manual Mappingclearing 172overview 171Mappingatom 170automatic 171ChemDraw 9 • xi
AdministratorMapping (continued)clearing 172exporting 172manual 171reaction 170Margin Widthadjusting 60description 60effect on Bond crossings 60specifying 86Margin width, specifying 86Marquee tool 109Mass Fragmentation Tool 143Mass spectraimporting as JDX 201importing as SPC 202mass/charge, displaying 139Maximize objects 181MDL MolFile 201MDL RGFile 201Melting Point, definition 142Menusview 17Menus and toolbars 17Message Areadisplay of fixed angles 64Messagesanalysis 238status 238Mirror images, creating 115mol 201mol file format 201Molar refractivity 246Molecular Design Limited, see MDLMolecular mass, definition 138Molecular Simulations MolFile 201Molecular Weightcaption 139definition 138display in status bar 18how calculated 139Monochrome 200, 203Movingatoms, bond tool 70atoms, Selection Tool 112crosshair 184in tables 189objects 111MS, see spectraMSI MolFile format 201Multi-attached atom labels command 125Multi-Center Attachmentscommand 126overview 236Multiple Attachment Points 168Multiple Bond tool 63Multiple bonds tool 15Multiple Undo 25Multiple-paged documents, setup 178NNameinserting as structure 74of structure, inserting 73Name to structure seeName=StructName, automatic structure from 74Name=Struct 74converting 75limitations 74paste special 75with German names 74NameStruct 73Native file format 26New Color Button 131New Command 23New document 23New Slide 256New Template, creating 134Nicknamesdefining 122deleting 124generic 161xii•CambridgeSoft
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ChemOffice.Com®ChemDraw®Chemical
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License InformationChemOffice, Chem
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· Licensed users of ChemOffice Ent
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computer, except as provided below.
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Q: IS IT OK TO COPY MY COLLEAGUE’
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A Guide to CambridgeSoft ManualsAnd
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ContentsIntroductionWhat’s New in
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Method 2: Labeling an atom by point
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Chapter 10: Drawing Query Structure
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Searching. . . . . . . . . . . . .
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Administratorthey are presented. Ex
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Administrator12•IntroductionCambr
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The Mac GUI is shown below.Administ
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ToolUse to…AdministratorQueryTool
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AdministratorChemDraw window. Undoc
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AdministratorDouble-clicking on an
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3. Click the checkbox next to Autos
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a file as a different format is use
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QuickDraw is the graphical format t
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Chapter 2: TutorialsOverviewThe tut
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.2. Double-click the atom.The hand
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3. Click the third arrow from the l
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2. Press the Enter or Return key to
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.Add second and third bonds:1. Poin
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Refine the shape of the arrow:1. Po
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4. Click each of the atoms shown be
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4. Select a folder in which to save
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Add labels to C1 and C6:3. Point to
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3. Click Paste to paste the informa
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2. Hold the mouse button and drag u
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Save and close the document:1. From
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The size of the orbital is constrai
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8. Click the Wedged Bond tool, poin
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Chapter 3: Drawing ChemicalStructur
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Adjustthis…If you want to …The
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You can use the tools on the Multip
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To draw a wedged bond:1. Click one
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If you click an atom in a ring, a s
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• Press the Ctrl or Command key w
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To convert ring types:1. With a bon
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Chapter 4:UltraStructNameStructName
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Converting Names toStructuresThere
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category ChemDraw 8 supports... Che
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Chapter 5: Drawing Captions andAtom
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• Subscript—Reduces the text by
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If you label C4, the second and thi
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5. To close the text box, click out
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4. The margin width is applied to a
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Hard-Coded HotKeysYou cannot edit h
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To edit atom number text:1. Click t
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Chapter 6: Drawing Orbitals,Symbols
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To draw a single lobe orbital:1. Ho
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To draw an H-dot or an H-dash:1. Ho
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The Arrow ToolsPaletteUse the Arrow
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Drawing LinesLines drawn with the l
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Some examples of shapes that you ca
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Deleting a SegmentTo delete a curve
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If you wantto...then...If you wantt
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Chapter 7: Manipulating DrawingsOve
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Selecting Entire StructuresTo selec
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The unselected bonds that are attac
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Reflecting ObjectsThrough PlanesYou
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3. The current median bond length f
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3. With the group selected, right-c
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Chapter 8: Advanced DrawingTechniqu
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Am Amyl AmericiumNp para-NeptuniumN
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ProExpanding LabelsMulti-Attached L
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3. Double-click on the cyclopentadi
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If you select only part of a struct
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Customizing the ColorPaletteYou can
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2. Click a color in the Color Wheel
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A new and untitled Template window
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Chapter 9: Working WithStructuresOv
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Propertym/zDescriptionMass/charge,
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3. Click the appropriate Position o
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To create a report and view results
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ProExpand GenericStructuresYou can
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The assigned atoms or bonds are hig
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Chapter 10:StructuresProDrawing Que
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• From the Structure menu, choose
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OptionSimple ringSearch ResultFinds
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Abnormal ValenceThe Abnormal Valenc
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The Bond Type options are described
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In the table below, points are may
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To Position …from the atom or bon
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. Not necessarily carbon (a generic
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A structure-based representation of
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Because of its prevalence the No Fl
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However, you are not interested in
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Always Display and PrintAtom Mappin
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ExportedQueryPropertiesISIS Mol Rxn
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ExportedQueryPropertiesISIS Mol Rxn
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Chapter 11: Working With PageLayout
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To create headers and footers:1. Fr
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Saving Page Setup SettingsYou can s
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A check mark appears next to the Sh
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Aligning ObjectsUse the Align comma
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The table appears in the document w
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7. Press Tab again to create a thir
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Chapter 12: Sharing InformationOver
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A clipping file or a scrap file is
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pasted in other types of documents.
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• SMDFormat Import ExportChemDraw
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.opened in versions 3.0, 3.0.1, 3.0
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For single step single or multi-lin
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different computers rather than usi
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Transferring ChemDrawDocuments Acro
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Chapter 13: ChemDraw/ExcelThe ChemD
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mats, but you may get error message
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Adding Structures withChemDrawThe C
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3. Select the search options:If you
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Aligning StructuresA structure may
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FunctionActionCHEM.COMPOSITION Retu
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AppendicesThis section contains the
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Appendix A: Accessing theCambridgeS
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Follow the links to do substructure
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You can search SciStore.Com for che
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Appendix B: Technical SupportOvervi
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4. If the problem still occurs, use
Page 242 and 243: Appendix C: The Chemistry ofChemDra
Page 244 and 245: +*/A series of anyCH 2 COOC(OPh) 3c
Page 246 and 247: Isotopes and ElementsBy default, Ch
Page 248 and 249: CIP rules are designed to order lig
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Page 254 and 255: Appendix D:WorksUltraHow ChemNMROve
Page 256 and 257: Appendix E:WorksProHow ChemPropChem
Page 258 and 259: Appendix F: Shortcuts andHotkeysSho
Page 260 and 261: Enter...to execute Command...Enter.
Page 262 and 263: Enter...to execute Command...Enter.
Page 264 and 265: HotkeyResultHotkeyResultTOTsxX1 n-B
Page 266 and 267: Appendix G: Document SettingsCreati
Page 268 and 269: Drawing, Atom Label, and Caption Te
Page 278 and 279: Appendix H: Chemistry FileFormatsOv
Page 280 and 281: Double bonds are bit encoded using
Page 282 and 283: IndexNumerics13C, 1 H shifts, estim
Page 284 and 285: Bond Propertiesdefining 155descript
Page 286 and 287: Chemical Warnings (continued)suppre
Page 288 and 289: Deletingatom labels 87Backspace key
Page 290 and 291: File format (continued)CTR 198cts 2
Page 294 and 295: Nicknames (continued)overview 121tr
Page 296 and 297: Printing (continued)ChemDraw Laser
Page 298 and 299: Saving customized settings 21Scalec
Page 300 and 301: System requirements 11TTable tool 1
Page 302 and 303: Use Defaults (continued)bond proper
Page 304 and 305: CAMBRIDGESOFTChemOffice Desktop toK
Page 306 and 307: CS ChemOfficeSoftware SuitesChemOff
Page 308 and 309: DESKTOPCS E-NotebookElectronic Jour
Page 310 and 311: DESKTOPCS ChemDrawChemical Structur
Page 312 and 313: DESKTOPCS Chem3DMolecular Modeling
Page 314 and 315: DESKTOPCS ChemFinderSearching and I
Page 316 and 317: DESKTOPCS ChemInfoReference and Che
Page 318 and 319: ENTERPRISEChemOffice WebServerEnter
Page 320 and 321: ENTERPRISEOracle CartridgeEnterpris
Page 322 and 323: KNOWLEDGEE-Notebook EnterpriseDeskt
Page 324 and 325: KNOWLEDGEDocument ManagerDesktop to
Page 326 and 327: KNOWLEDGE21CFR11 ComplianceElectron
Page 328 and 329: RESEARCH&Registration SystemChemica
Page 330 and 331: RESEARCH&Inventory ManagerChemical
Page 332 and 333: RESEARCH&CombiChem EnterpriseDeskto
Page 334 and 335: RESEARCH&BioAssay HTSBiological Ass
Page 336 and 337: RESEARCH&BioSAR BrowserBiological a
Page 338 and 339: CHEMICALChemACX DatabaseAvailable C
Page 340 and 341: CHEMICALThe Merck IndexChemistry’
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CHEMICALChemical DatabasesReference
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CONSULTING &Consulting & ServicesDe
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CS Software Problem ReportFor faste
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ChemDraw User's Manual - CambridgeSoft

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