ChemDraw User's Manual - CambridgeSoft

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The size of the orbital is constrained just likebonds. The constraint is based on a percentageof the Fixed Length setting in the DrawingSettings dialog box.Rotate the selection:1. Double-click the Rotation handle in the upperright of the Selection Rectangle to open theRotate dialog box.NOTE: Orbitals are not automatically grouped withthe closest structure. If you want to group the orbitalwith the existing structure so you can move them as aunit, choose Group from the Object menu.Move part of the structure to the front to overlapthe orbital:1. Click the Marquee tool .2. Point above the structure and drag around theupper fragment to select the three bonds.2. Type 180 in the text box, select degrees CW,and then click Rotate.RotateObjectsDB 150 dpiChange the layering of the structure so that theselection is in front:• From the Object menu, choose Bring toFront.Orient the front part of the structure to create aNewman projection.1. Point within the Selection Rectangle until thepointer changes to a hand.NOTE: Only bonds that are completely within the Lassoarea are selected. Do not select the bond connecting the twofragments. Alternately, you can Shift+click on each bondseparately.<strong>ChemDraw</strong> 9 Tutorials • 55Tutorial 6: Newman Projections
2. Drag the selection until the central atom of theselection is centered within the orbital.1. Click the Solid Bond tool .2. Click in the document window and dragdownward to create the first bond.Administrator3. Release the mouse button and click outside theSelection Rectangle to deselect the structure.3. Continue pointing at the lower atom and clickagain to add a second bond.Save and close the document:1. From the File menu, choose Save.2. From the File menu, choose Close.Tutorial 7: ShowingStereochemistryThis tutorial demonstrates using Stereochemistrymarkers and the flip command.Create a new document.1. From the File menu, choose New Document.2. From the File menu, choose Save As.3. Type tut7.cdx in the appropriate text box.4. Select a folder in which to save the file.5. Click Save.Draw the following structure:4. Continue pointing at the same atom and clickagain to add a third bond.5. Point to the atom shown below and click.6. Point to the atom shown below and click twiceto create two bonds.OOH7. Pointing to the bond shown below, right-click,point to Double, and then choose Plain.NH 256•Tutorials<strong>CambridgeSoft</strong>Tutorial 7: Showing Stereochemistry
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ChemOffice.Com®ChemDraw®Chemical
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License InformationChemOffice, Chem
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· Licensed users of ChemOffice Ent
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computer, except as provided below.
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Q: IS IT OK TO COPY MY COLLEAGUE’
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A Guide to CambridgeSoft ManualsAnd
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ContentsIntroductionWhat’s New in
Page 15 and 16: Method 2: Labeling an atom by point
Page 17 and 18: Chapter 10: Drawing Query Structure
Page 19 and 20: Searching. . . . . . . . . . . . .
Page 21 and 22: Administratorthey are presented. Ex
Page 23 and 24: Administrator12•IntroductionCambr
Page 25 and 26: The Mac GUI is shown below.Administ
Page 27 and 28: ToolUse to…AdministratorQueryTool
Page 29 and 30: AdministratorChemDraw window. Undoc
Page 31: AdministratorDouble-clicking on an
Page 36 and 37: 3. Click the checkbox next to Autos
Page 38 and 39: a file as a different format is use
Page 40 and 41: QuickDraw is the graphical format t
Page 42 and 43: Chapter 2: TutorialsOverviewThe tut
Page 44 and 45: .2. Double-click the atom.The hand
Page 46 and 47: 3. Click the third arrow from the l
Page 48 and 49: 2. Press the Enter or Return key to
Page 50 and 51: .Add second and third bonds:1. Poin
Page 52 and 53: Refine the shape of the arrow:1. Po
Page 54 and 55: 4. Click each of the atoms shown be
Page 56 and 57: 4. Select a folder in which to save
Page 58 and 59: Add labels to C1 and C6:3. Point to
Page 60 and 61: 3. Click Paste to paste the informa
Page 62 and 63: 2. Hold the mouse button and drag u
Page 64 and 65: Save and close the document:1. From
Page 68 and 69: 8. Click the Wedged Bond tool, poin
Page 70 and 71: Chapter 3: Drawing ChemicalStructur
Page 72 and 73: Adjustthis…If you want to …The
Page 74 and 75: You can use the tools on the Multip
Page 76 and 77: To draw a wedged bond:1. Click one
Page 78 and 79: If you click an atom in a ring, a s
Page 80 and 81: • Press the Ctrl or Command key w
Page 82 and 83: To convert ring types:1. With a bon
Page 84 and 85: Chapter 4:UltraStructNameStructName
Page 86 and 87: Converting Names toStructuresThere
Page 88 and 89: category ChemDraw 8 supports... Che
Page 90 and 91: Chapter 5: Drawing Captions andAtom
Page 92 and 93: • Subscript—Reduces the text by
Page 94 and 95: If you label C4, the second and thi
Page 96 and 97: 5. To close the text box, click out
Page 98 and 99: 4. The margin width is applied to a
Page 100 and 101: Hard-Coded HotKeysYou cannot edit h
Page 102 and 103: To edit atom number text:1. Click t
Page 104 and 105: Chapter 6: Drawing Orbitals,Symbols
Page 106 and 107: To draw a single lobe orbital:1. Ho
Page 108 and 109: To draw an H-dot or an H-dash:1. Ho
Page 110 and 111: The Arrow ToolsPaletteUse the Arrow
Page 112 and 113: Drawing LinesLines drawn with the l
Page 114 and 115: Some examples of shapes that you ca
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Deleting a SegmentTo delete a curve
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If you wantto...then...If you wantt
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Chapter 7: Manipulating DrawingsOve
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Selecting Entire StructuresTo selec
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The unselected bonds that are attac
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Reflecting ObjectsThrough PlanesYou
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3. The current median bond length f
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3. With the group selected, right-c
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Chapter 8: Advanced DrawingTechniqu
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Am Amyl AmericiumNp para-NeptuniumN
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ProExpanding LabelsMulti-Attached L
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3. Double-click on the cyclopentadi
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If you select only part of a struct
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Customizing the ColorPaletteYou can
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2. Click a color in the Color Wheel
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A new and untitled Template window
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Chapter 9: Working WithStructuresOv
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Propertym/zDescriptionMass/charge,
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3. Click the appropriate Position o
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To create a report and view results
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ProExpand GenericStructuresYou can
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The assigned atoms or bonds are hig
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Chapter 10:StructuresProDrawing Que
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• From the Structure menu, choose
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OptionSimple ringSearch ResultFinds
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Abnormal ValenceThe Abnormal Valenc
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The Bond Type options are described
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In the table below, points are may
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To Position …from the atom or bon
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. Not necessarily carbon (a generic
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A structure-based representation of
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Because of its prevalence the No Fl
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However, you are not interested in
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Always Display and PrintAtom Mappin
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ExportedQueryPropertiesISIS Mol Rxn
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ExportedQueryPropertiesISIS Mol Rxn
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Chapter 11: Working With PageLayout
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To create headers and footers:1. Fr
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Saving Page Setup SettingsYou can s
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A check mark appears next to the Sh
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Aligning ObjectsUse the Align comma
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The table appears in the document w
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7. Press Tab again to create a thir
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Chapter 12: Sharing InformationOver
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A clipping file or a scrap file is
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pasted in other types of documents.
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• SMDFormat Import ExportChemDraw
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.opened in versions 3.0, 3.0.1, 3.0
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For single step single or multi-lin
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different computers rather than usi
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Transferring ChemDrawDocuments Acro
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Chapter 13: ChemDraw/ExcelThe ChemD
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mats, but you may get error message
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Adding Structures withChemDrawThe C
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3. Select the search options:If you
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Aligning StructuresA structure may
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FunctionActionCHEM.COMPOSITION Retu
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AppendicesThis section contains the
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Appendix A: Accessing theCambridgeS
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Follow the links to do substructure
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You can search SciStore.Com for che
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Appendix B: Technical SupportOvervi
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4. If the problem still occurs, use
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Appendix C: The Chemistry ofChemDra
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+*/A series of anyCH 2 COOC(OPh) 3c
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Isotopes and ElementsBy default, Ch
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CIP rules are designed to order lig
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• Critical messages that may affe
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MessageThis label has anunrecognize
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Appendix D:WorksUltraHow ChemNMROve
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Appendix E:WorksProHow ChemPropChem
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Appendix F: Shortcuts andHotkeysSho
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Enter...to execute Command...Enter.
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Enter...to execute Command...Enter.
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HotkeyResultHotkeyResultTOTsxX1 n-B
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Appendix G: Document SettingsCreati
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Drawing, Atom Label, and Caption Te
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Appendix H: Chemistry FileFormatsOv
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Double bonds are bit encoded using
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IndexNumerics13C, 1 H shifts, estim
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Bond Propertiesdefining 155descript
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Chemical Warnings (continued)suppre
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Deletingatom labels 87Backspace key
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File format (continued)CTR 198cts 2
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Inserting (continued)rows in tables
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Nicknames (continued)overview 121tr
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Printing (continued)ChemDraw Laser
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Saving customized settings 21Scalec
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System requirements 11TTable tool 1
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Use Defaults (continued)bond proper
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CAMBRIDGESOFTChemOffice Desktop toK
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CS ChemOfficeSoftware SuitesChemOff
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DESKTOPCS E-NotebookElectronic Jour
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DESKTOPCS ChemDrawChemical Structur
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DESKTOPCS Chem3DMolecular Modeling
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DESKTOPCS ChemFinderSearching and I
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DESKTOPCS ChemInfoReference and Che
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ENTERPRISEChemOffice WebServerEnter
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ENTERPRISEOracle CartridgeEnterpris
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KNOWLEDGEE-Notebook EnterpriseDeskt
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KNOWLEDGEDocument ManagerDesktop to
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KNOWLEDGE21CFR11 ComplianceElectron
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RESEARCH&Registration SystemChemica
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RESEARCH&Inventory ManagerChemical
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RESEARCH&CombiChem EnterpriseDeskto
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RESEARCH&BioAssay HTSBiological Ass
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RESEARCH&BioSAR BrowserBiological a
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CHEMICALChemACX DatabaseAvailable C
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CHEMICALThe Merck IndexChemistry’
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CHEMICALChemical DatabasesReference
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CONSULTING &Consulting & ServicesDe
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CS Software Problem ReportFor faste
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ChemDraw User's Manual - CambridgeSoft

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