Sunday, February 20 (Continued)(S1-3) A Food Systems Approach to Address Poor Nutritional Health in Both Advanced and DevelopingEconomiesRobin D. Graham, Flinders University <strong>of</strong> South Australia(S2) Integration <strong>of</strong> Bioinformatics for Genomics and Proteomics DataLevel 2, Grand Oaks Ballroom P/QSession Organizer: Cathy Wu, Center for Bioinformatics & Computational Biology, University <strong>of</strong> Delaware(S2-1) Integrative Bioinformatics for Genomics and ProteomicsCathy Wu, Center for Bioinformatics & Computational Biology, University <strong>of</strong> Delaware(S2-2) Integrated Bioinformatics for MS-Based ProteomicsEric Deutsch, Institute for Systems Biology(S2-3) Skate Genome Project: Cyber-Enabled Bioinformatics CollaborationJames Vincent, University <strong>of</strong> Vermont(S3) Single-Cell Environmental GenomicsLevel 2, Grand Oaks Ballroom N/OSession Organizer: Rob Knight, University <strong>of</strong> ColoradoDaily <strong>Program</strong>(S3-1) Early Elements <strong>of</strong> a Pipeline for Single Bacterial Cell GenomicsDave Relman, Departments <strong>of</strong> Microbiology & Immunology, and <strong>of</strong> Medicine, Stanford University(S3-2) Assembling Complete Genomes from Complex MixturesFolker Meyer, Argonne National Laboratory, Mathematics and Computer Science Division(S3-3) Dining in with Trillions <strong>of</strong> Fascinating Friends: Exploring our Human Gut Microbiome in Healthand DiseaseJeff Gordon, Center for Genome Sciences and Systems Biology, Washington University School <strong>of</strong> Medicine10:00 am – 6:30 pm Exhibit Hall Open — Level 2, Grand Oaks Ballroom10:30 am – 11:00 am Morning Refreshment Break — Level 2, Grand Oaks Ballroom, Exhibit Hall10:30 am – 12:00 pm Poster Session I (Odd Numbered Posters) — Level 2, Grand Oaks Ballroom, Exhibit Hall10:30 am – 11:30 am Meet the Speaker — Level 2, Grand Oaks Ballroom, Exhibit Hall, Demo StageLarry Gold, Chairman, Founder, & CEO <strong>of</strong> SomaLogic, Inc.11:30 am – 11:45 am Career Fair Presentation — Level 2, Grand Oaks Ballroom, Exhibit Hall, Demo Stage12:00 pm – 1:30 pm Munch & Mingle — Level 2, Grand Oaks Ballroom, Exhibit Hall12:00 pm – 1:30 pm Vendor PresentationsSee page 120 for detailed information.1:30 pm – 3:00 pm Concurrent Research Group Presentations(R1) Joint Session: Proteome Informatics Research Group (iPRG) & Proteomics Standards Research Group(sPRG)Level 2, Grand Oaks Ballroom R/S(R1a) iPRG <strong>2011</strong>: A Study on the Identification <strong>of</strong> Electron Transfer Dissociation (ETD) Mass SpectraSession Organizer & Presenter: Lennart Martens, Ghent University(R1b) <strong>ABRF</strong>-sPRG<strong>2011</strong> Study: Development <strong>of</strong> a Comprehensive Standard for Analysis <strong>of</strong> Post-Translational ModificationsSession Organizer & Presenter: Alexander R. Ivanov, Harvard School <strong>of</strong> Public Health18 • <strong>ABRF</strong> <strong>2011</strong> — Technologies to Enable Personalized Medicine
(R2) Antibody Technology Research Group (ARG): Antibodies — Moving Closer to Personalized Therapeuticsand DiagnosticsLevel 2, Grand Oaks Ballroom P/QSession Organizers: Robert Carnahan, Vanderbilt University Medical Center, and Frances Weis-Garcia, Memorial Sloan-Kettering Cancer CenterPresenters: Brian Curtis, Blood Center <strong>of</strong> Wisconsin, John Harlan, Abbott Laboratories, and Robert Umek, Meso ScaleDiscovery(R3) Joint Session: Genomic Variation Research Group (GVRG) & DNA Sequencing Research Group (DSRG)Level 2, Grand Oaks Ballroom N/O(R3a): Evaluation <strong>of</strong> DNA Whole Genome Amplification Technologies for GenotypingSession Organizers & Presenters: Casey Dagnall and Amy Hutchinson, Core Genotyping Facility, SAIC-Frederick,Inc., NCI-Frederick(R3b): DNA Sequencing Research Group (DSRG)Session Organizer: Deborah Grove, Pennsylvania State University(R3b-1) Comparison <strong>of</strong> Custom Target Enrichment Methods; Agilent vs. NimblegenAnoja Perera, Stowers Institute for Medical Research Molecular Biology Facility(R3b-2) A Methodology Study for Metagenomics Using Next Generation SequencersSushmita Singh, BioMedical Genomics Center, University <strong>of</strong> Minnesota3:00 pm – 4:15 pm Concurrent Workshop Sessions(W1) The Diagnostics Core Facility: Harvesting the Promise <strong>of</strong> Personalized MedicineLevel 2, Grand Oaks Ballroom R/SSession Organizer: Katia Sol-Church, Nemours Biomedical Research, A.I. duPont Hospital for ChildrenDaily <strong>Program</strong>(W1-1) Win on Sunday, Sell on Monday: From the Exome Sequencing <strong>of</strong> One Boy to the Delivery <strong>of</strong>Clinical DiagnosticsMichael R. Tschannen, Human and Molecular Genetics Center, Department <strong>of</strong> Physiology, Medical College <strong>of</strong>Wisconsin(W1-2) Chromosomal Microarray Analysis in the ClinicLisa D. White, Microarray Core, Baylor College <strong>of</strong> Medicine(W1-3) Whole Genome Sequencing in the Clinical LaboratoryTina Hambuch, Illumina Clinical Services Laboratory, Illumina, Inc.(W2) Spectral and Sequence Database Searching in ProteomicsLevel 2, Grand Oaks Ballroom P/QSession Organizer: Lennart Martens, Ghent University(W2-1) ETD Performance and Complementarity to Other Fragmentation Methods for ProteomicAnalysisRobert Chalkley, University <strong>of</strong> California San Francisco(W2-2) Discovery, Identification and Localization <strong>of</strong> Post-Translational ModificationsNuno Bandeira, Center for Computational Mass Spectrometry, Department <strong>of</strong> Computer Science and EngineeringSkaggs School <strong>of</strong> Pharmacy and Pharmaceutical Sciences, University <strong>of</strong> California San Diego(W2-3) Building and Using MS/MS Spectral Libraries for Peptide Identifications in ProteomicsHenry Lam, The Hong Kong University <strong>of</strong> Science and Technology(W3) Quantifying Protein Turnover by In Vivo Metabolic LabelingLevel 2, Grand Oaks Ballroom N/OSession Organizer: Kieran Geoghegan, Pfizer, Inc.<strong>ABRF</strong> <strong>2011</strong> — Technologies to Enable Personalized Medicine • 19
- Page 7 and 8: Meeting SponsorsThe Association of
- Page 9 and 10: Registration ServicesRegistration S
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- Page 14 and 15: AwardsABRF Annual Award for Outstan
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- Page 18 and 19: Program-at-a-GlanceProgram-at-a-Gla
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- Page 64 and 65: Poster Abstractsglobal gene express
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Poster Abstracts129 Bravo Automated
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distribution. Additionally, we show
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Illumina Genome Analyzer. PicoPlex
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uniformity, reproducibility of enri
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kits for Tempus TM and PAXgene® st
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165 Benchmarking miRNA ExpressionLe
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Phoenix crystallography robot and a
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Laboratory is located next door and
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data of a Thermo Orbitrap instrumen
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**197 Multi-Functional Superparamag
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pattern of N-linked glycans in form
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advantage of using two separate 15
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allowed absolute quantitation. Comp
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levels between the animal groups. A
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MuDPIT, and off-gel electrophoresis
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237 Multi-Site Assessment of Proteo
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with good limits of quantification
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249 Rapid Monoclonal Antibody Glyca
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OOng, J. - 117PPatel, S. - 169Peake
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AnaSpec, Eurogentec Group Booth 417
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FASEB MARC Program Booth 4169650 Ro
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IntegenX, Inc. Booth 2015720 Stoner
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Nonlinear Dynamics Booth 1052530 Me
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Roche Applied Science Booth 5009115
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Exhibit Hall FloorplanGrand Oaks Ba
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Exhibitor List in Booth OrderExhibi
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This workshop will present ways to
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Grand Oaks Ballroom,Rooms P&Q, Leve
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NotesNotesABRF 2011 — Technologie
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Tuesday, February 22 — 12:00 pm -
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MARCH 16-20, 2012 • DISNEY’S CO
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