Tuesday, February 22 (Continued)9:00 am – 10:30 am Concurrent Scientific Sessions(S7) Next Generation Sequencing Technologies on the HorizonLevel 2, Grand Oaks Ballroom R/SSession Organizer: Katia Sol-Church, Nemours Biomedical Research, A.I. duPont Hospital for Children(S7-1) Towards Optical DNA Sequencing Using Nanopore ArraysAmit Meller, Department <strong>of</strong> Biomedical Engineering & Department <strong>of</strong> Physics, Boston University(S7-2) Single Molecule Real-Time DNA Sequencing on the Surface <strong>of</strong> a Quantum-Dot NanocrystalPeter B. Vander Horn, Genetic Systems, Life Technologies(S7-3) Sequencing with Semiconductor ChipsGlenn Powell, Ion Torrent(S9) Proteomics StandardizationLevel 2, Grand Oaks Ballroom N/OSession Organizer: David B. Friedman, Proteomics Laboratory Mass Spectrometry Research Center, Vanderbilt University(S9-1) A Multi-Laboratory Study Assessing Robustness and Reproducibility <strong>of</strong> Plasma ReferenceSample for Benchmarking LC-MS Platform PerformanceJuan-Pablo Albar, ProteoRed, National Center for Biotechnology-CSICDaily <strong>Program</strong>(S9-2) Clinical Proteomic Technologies for Cancer: NIH-Funded Measurement ScienceChristopher Kinsinger, National Cancer Institute, Center for Strategic Scientific Initiatives, Office <strong>of</strong> Cancer ClinicalProteomics Research(S9-3) Why Reproducible Outcomes are Essential in Proteomic Research and WhyStandardization <strong>of</strong> Processes is Essential for Achieving ReproducibilityAndy Borthwick, Nonlinear Dynamics Limited10:00 am – 2:00 pm Exhibit Hall Open — Level 2, Grand Oaks Ballroom10:30 am – 11:00 am Morning Refreshment Break — Level 2, Grand Oaks Ballroom, Exhibit Hall10:30 am – 12:00 pm Poster Session III — Level 2, Grand Oaks Ballroom, Exhibit Hall10:30 am – 11:00 am Status <strong>of</strong> the NCRR — Level 2, Grand Oaks Ballroom P/QPresenter: Mark O. Lively, Wake Forest University School <strong>of</strong> Medicine11:00 am – 12:00 pm Poster Awards (Sponsored by Waters Corporation) — Level 2, Grand Oaks Ballroom, Exhibit Hall, Demo Stage10:30 am – 11:30 am Meet the Speaker — Level 2, Grand Oaks Ballroom, Exhibit HallDavid de Graaf, President & CEO, Selventa12:00 pm – 1:30 pm Munch & Mingle — Level 2, Grand Oaks Ballroom, Exhibit Hall12:00 pm – 1:30 pm Vendor and Demo Stage PresentationsSee pages 120 and 126 for detailed information.1:30 pm – 3:00 pm Concurrent Research Group Presentations(R6) Joint Session: Protein Expression Research Group (PERG) & Molecular Interactions Research Group (MIRG)Level 2, Grand Oaks Ballroom R/S(R6a) PERG Research Group Presentation: Refolding StudySession Organizer: Cynthia Kinsland, Cornell University(R6b) Conclusions from the MIRG 2010 Benchmark Study: Molecular Interactions in a ThreeComponent System and Presentation <strong>of</strong> <strong>2011</strong> Survey Results on Label-Free TechnologiesSession Organizer: Aaron Yamiuk, Bristol-Myers SquibbPresenters: Satya Yadav, Cleveland Clinic Foundation, and Aaron Yamiuk, Bristol-Myers Squibb24 • <strong>ABRF</strong> <strong>2011</strong> — Technologies to Enable Personalized Medicine
(R7) Light Microscopy Research Group (LMRG)Level 2, Grand Oaks Ballroom P/QSession Organizer: Robert Stack, Wadsworth Center, New York State Department <strong>of</strong> Health(R7-1) Point Spread Functions, Spectral Calibration, and BeyondRobert Stack, Wadsworth Center, New York State Department <strong>of</strong> Health(R7-2) Deconvolution: Core Concepts, Algorithms, and Advanced IssuesBrian Northan, MediaCybernetics(R8) Joint Session: Proteomics Research Group (PRG) & Metabolomics Research Group (MRG)Level 2, Grand Oaks Ballroom N/O(R8a) PRG-<strong>2011</strong>: Defining the Interaction Between Users and Suppliers <strong>of</strong> Proteomics ServicesSession Organizer: David Hawke, The University <strong>of</strong> Texas MD Anderson Cancer Center(R8b) Metabolomics Research Group <strong>2011</strong> StudySession Organizer: William R. Wik<strong>of</strong>f, University <strong>of</strong> California DavisPresenters: John M. Asara, Beth Israel Deaconess Medical Center, Vladimir Tolstikov and William R. Wik<strong>of</strong>f,University <strong>of</strong> California Davis3:00 pm – 4:15 pm Concurrent Workshop Sessions(W11) The Business <strong>of</strong> Running a Core FacilityLevel 2, Grand Oaks Ballroom R/SSession Organizer: Nicholas Ambulos, University <strong>of</strong> Maryland School <strong>of</strong> MedicinePresenters: Nicholas Ambulos, University <strong>of</strong> Maryland School <strong>of</strong> Medicine, and Steve Bobin, Dartmouth School <strong>of</strong> Medicine(W12) Microarrays: The Reports <strong>of</strong> My Death Have Been Greatly ExaggeratedLevel 2, Grand Oaks Ballroom P/QSession Organizer: Don Baldwin, University <strong>of</strong> Pennsylvania, Penn Molecular Pr<strong>of</strong>iling FacilityDaily <strong>Program</strong>(W12-1) Chip or Seq: Helping Clients ChooseDon Baldwin, University <strong>of</strong> Pennsylvania, Penn Molecular Pr<strong>of</strong>iling Facility, and Kevin Knudtson, University <strong>of</strong> Iowa(W12-2) Microarray Analysis <strong>of</strong> Fluorescence Activated Cell Sorter-Derived Cells: Creating Harmonybetween TechnologiesScott Tighe, University <strong>of</strong> Vermont(W12-3) Microarray Futures: Don’t Decommission Your Scanners Just YetSeth Crosby, Department <strong>of</strong> Genetics, Washington University School <strong>of</strong> Medicine(W15b) ETD Workshop Seminar Series PART II: Manual Interpretation <strong>of</strong> Electron Transfer Dissociation (ETD)Mass Spectra <strong>of</strong> Peptides*Level 2, Grand Oaks Ballroom N/OPresenter: Donald F. Hunt, Departments <strong>of</strong> Chemistry and Pathology, University <strong>of</strong> Virginia*Attendees must be registered for <strong>ABRF</strong> <strong>2011</strong> to attend the workshop and must also complete the ETD Workshop SeminarForm. Please visit the Registration Desk to sign up for the session.4:15 pm – 4:45 pm Afternoon Refreshment Break — Level 2, Grand Oaks Ballroom N/S Foyer4:45 pm – 6:00 pm Concurrent Workshop Sessions(W13) Institutional Core ManagementLevel 2, Grand Oaks Ballroom R/SSession Organizers: Susan Meyn, Vanderbilt University Medical Center, and Paula Turpen, University <strong>of</strong> Nebraska MedicalCenterPresenter: Pam Alexander, Morehouse School <strong>of</strong> Medicine, Julie Auger, University <strong>of</strong> California San Francisco, GregoryFarber, National Center for Research Resources, and Sheenah Mische, New York University Langone Medical Center<strong>ABRF</strong> <strong>2011</strong> — Technologies to Enable Personalized Medicine • 25
- Page 7 and 8: Meeting SponsorsThe Association of
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uniformity, reproducibility of enri
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kits for Tempus TM and PAXgene® st
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165 Benchmarking miRNA ExpressionLe
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Phoenix crystallography robot and a
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Laboratory is located next door and
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data of a Thermo Orbitrap instrumen
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**197 Multi-Functional Superparamag
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pattern of N-linked glycans in form
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advantage of using two separate 15
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allowed absolute quantitation. Comp
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levels between the animal groups. A
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MuDPIT, and off-gel electrophoresis
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237 Multi-Site Assessment of Proteo
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with good limits of quantification
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249 Rapid Monoclonal Antibody Glyca
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OOng, J. - 117PPatel, S. - 169Peake
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AnaSpec, Eurogentec Group Booth 417
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FASEB MARC Program Booth 4169650 Ro
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IntegenX, Inc. Booth 2015720 Stoner
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Nonlinear Dynamics Booth 1052530 Me
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Roche Applied Science Booth 5009115
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Exhibit Hall FloorplanGrand Oaks Ba
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Exhibitor List in Booth OrderExhibi
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This workshop will present ways to
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Grand Oaks Ballroom,Rooms P&Q, Leve
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NotesNotesABRF 2011 — Technologie
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Tuesday, February 22 — 12:00 pm -
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MARCH 16-20, 2012 • DISNEY’S CO