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Bio-medical Ontologies Maintenance and Change Management

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Classifying Patterns in <strong>Bio</strong>informatics Databases 199<br />

For every μ ∈{1, 2, ...p}, from the couple (x μ , y μ ) the vector partition<br />

operator is applied to each x μ , then the new fundamental set is expressed by:<br />

� (x μ1 , y μ ), (x μ2 , y μ ), ..., (x μq , y μ ) | μ =1, 2, ..., p, l =1, 2, ...q �<br />

Now, from the couple (xμl , yμ � ) the q matrices are built as follows:<br />

μ μl t y ⊠ (x ) �<br />

mx( n<br />

q ). Then apply the binary � operator to the corresponding<br />

matrices obtained to get Λl as follows: Λl = p � �<br />

μ μl t y ⊠ (x )<br />

μ=1<br />

�<br />

mx( n<br />

q ).The<br />

ij−th component of each l matrices is given by:<br />

λ l ij =<br />

p�<br />

μ=1<br />

α(y μ<br />

i ,xμl<br />

j )<br />

RECALLING PHASE<br />

STEP 1:<br />

A pattern xω , that could be or not from the fundamental set, is presented<br />

to Λl . First, we have to apply the vector partition operator to xω :<br />

ρ(x ω ,q)= � x ω1 , x ω2 , ..., x ωq�<br />

For every Λ l matrix <strong>and</strong> x ωl partition with l = {1, 2, ..., q}, the∇β operation<br />

is done <strong>and</strong> the resulting vector is assigned to a vector called z ωl : z ωl =<br />

Λ l ∇βx ωl the i−th component of the resulting vector is given as:<br />

z ωl<br />

i =<br />

n�<br />

j=1<br />

β(λ l ij ,xωl<br />

j )<br />

STEP 2:<br />

It is necessary to build the min sum vector r according to the definition<br />

3, therefore the corresponding zint ωl is given as:<br />

zint ωl<br />

i =<br />

� 1ifri = �<br />

k∈θ<br />

0 otherwise<br />

rk AND zint ωl<br />

i =0<br />

where θ = � i|zint ωl<br />

i =0� .<br />

Once we have obtained each zint ωl vector from step 2, in order to obtain<br />

one resultant vector the step 3 is applied.<br />

STEP 3:<br />

An intermediate vector I is created. This vector will contain the sum of<br />

the i − th components of the zint ωl vectors:<br />

I ω i =<br />

q�<br />

l=1<br />

zint ωl<br />

i<br />

then the corresponding y ω vector is obtained by:

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