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5.3 Ainide Modes 251<br />

Table 5-1. Amide modes of isolated and aqueous hydrogen-bonded N-Methylacetamide"<br />

Mode v(obsib v(calc)c Potential energy distributiond<br />

I 1706<br />

1646<br />

1626<br />

I1 1511<br />

1584<br />

111 1265<br />

1313<br />

IV 658<br />

632<br />

V 391<br />

(7501"<br />

v1 626<br />

(600)'<br />

VII ~<br />

195g<br />

1708<br />

1632<br />

1626<br />

1512<br />

1575<br />

1264<br />

1305<br />

648<br />

640<br />

391<br />

744<br />

627<br />

605<br />

-<br />

20s<br />

CO ~(83) CCN d(l1)<br />

CO s(30j [O)HOH b(30) fH)HOH b(18)<br />

CO s(38) (0)HOH b(28) (H)HOH b(1S)<br />

NH ib(5l) CN s(28)<br />

CN s(48j NH ib(36)<br />

NH lb(21) CO lb(21) CN ~(18) CC S(10) CCH3 sb(l0)<br />

NH lb(26) CN ~(20) CCHi sb(20) CO lb(12)<br />

CC ~(36) CO ib(34)<br />

CO ib(35) CC s(32)<br />

CN t(118) NH ob(51) CO ob(23)<br />

CN t(43) H 0 b2128) NH ob(21)<br />

CO ob(67) CCH3 or(26) CN t( 11)<br />

CO ob(50) 0 . H b2(30) CCH3 OI(19) NH ob(l0)<br />

CN t(38) NH ob(21)<br />

First line: NMA; second line(s): NMA-(H20)2. 6-31+G* basis set.<br />

NMA: from [59]; NMA-(H20)2: from 1611 and 1681, except where noted.<br />

NMA: from [73]: NMA-(H20)2: from [64].<br />

s: stretch, d: deformation. b: bend. ib: in-plane bend, sb: synmetric bend, ob: out-of-plane bend,<br />

b2: essentially ob, or: out-of-plane rock, t: torsion. Group coordinates are defined in [59]. Contributions<br />

> 10.<br />

Possible value, from 1691.<br />

Observed in neat NMA [65].<br />

From 1621 (at 206 cm-' from [70]1.<br />

(FA)2 this contribution is NH in-plane bend (ib) [63], but such a result is uncertain<br />

because of the absence of experimental data on this complex and the resulting lack<br />

of optimization of the FA force constants. Nevertheless, we see that even for as<br />

localized a mode as CO s the specific nature of the eigenvector can depend on the<br />

details of the calculation.<br />

The amide I1 mode is a mixture of NH ib and CN s, with the former dominating<br />

in NMA and the latter, at a higher hydrogen-bonded frequency, dominating in<br />

NMA-(HzO)?, (Table 5-1). It is interesting that the CN s predominance does<br />

not appear at 3-21G for NMA-(FA)> [63], nor at 4-31G [62] or 4-31G" [61] for<br />

NMA-(H20)2, showing the evident influence of basis set on the predicted eigenvectors.<br />

Nor is CN s predominant in polypeptides [5].<br />

The amide I11 mode is also a mixture of NH ib and CN s, although other coordinates<br />

make significant contributions. Since CH3 symmetric bend (sb) is an important<br />

one, CH3 point-mass calculations [52, 51 distort the relative importance of<br />

CC s. As seen from Table 5-1, CO ib is a relatively large contributor in NMA and a

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