Analysing spatial point patterns in R - CSIRO
Analysing spatial point patterns in R - CSIRO
Analysing spatial point patterns in R - CSIRO
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33.3 Fitt<strong>in</strong>g Poisson models 209<br />
where α 1 ,... ,α 6 and β 1 ,...,β 6 are parameters. The <strong>in</strong>tensity is logl<strong>in</strong>ear <strong>in</strong> x with a different<br />
slope and <strong>in</strong>tercept for each mark.<br />
The result of ppm is aga<strong>in</strong> an object of class "ppm" represent<strong>in</strong>g a fitted <strong>po<strong>in</strong>t</strong> process model.<br />
To plot the fitted <strong>in</strong>tensity and conditional <strong>in</strong>tensity of the fitted model, use plot.ppm. For a<br />
multitype <strong>po<strong>in</strong>t</strong> process you will get a separate plot for each possible mark value.<br />
More complicated examples are:<br />
> ppm(lans<strong>in</strong>g, ~marks * polynom(x, y, 2))<br />
> ppm(lans<strong>in</strong>g, ~marks * harmonic(x, y, 2))<br />
33.3.4 Facilities available<br />
A fitted multitype Poisson process model can be manipulated us<strong>in</strong>g any of the methods available<br />
for the class ppm:<br />
pr<strong>in</strong>t pr<strong>in</strong>t basic <strong>in</strong>formation<br />
summary pr<strong>in</strong>t detailed summary <strong>in</strong>formation<br />
plot plot the fitted (conditional) <strong>in</strong>tensity<br />
predict fitted (conditional) <strong>in</strong>tensity<br />
fitted fitted (conditional) <strong>in</strong>tensity at data <strong>po<strong>in</strong>t</strong>s<br />
update re-fit the model<br />
coef extract the fitted coefficient vector ̂θ<br />
vcov variance-covariance matrix of ̂θ<br />
anova analysis of deviance<br />
logLik evaluate log-pseudolikelihood<br />
model.matrix extract design matrix<br />
formula extract trend formula of model<br />
terms extract terms <strong>in</strong> model formula<br />
The follow<strong>in</strong>g functions are also available:<br />
step stepwise model selection<br />
drop1 one step backward <strong>in</strong> model selection<br />
model.images compute images of canonical covariates <strong>in</strong> model<br />
effectfun fitted <strong>in</strong>tensity as function of one covariate<br />
A fitted multitype Poisson process model can be simulated automatically us<strong>in</strong>g rmh.ppm or<br />
simulate.ppm.<br />
Copyright<strong>CSIRO</strong> 2010