Rice Genetics IV - IRRI books - International Rice Research Institute

genome sequence of rice, this will become easier. Although functional genomic approachesto gene identification will result in isolation of thousands of new genes,final determination of function for agronomically important genes will usually requireassociation of the DNA sequence with the map position of the locus. Identificationof gene sequences will also result in more accurate markers that can be used formarker-assisted selection.ReferencesAhn SN, Bollich CN, McClung AM, Tanksley SD. 1993. RFLP analysis of genomic regionsassociated with cooked-kernel elongation in rice. Theor. Appl. Genet. 87:27-32.Ahn SN, Bollich CN, Tanksley SD. 1992. RFLP tagging of a gene for aroma in rice. Theor.Appl. Genet. 84:825-828.Ahn SN, Kim YK, Han SS, Choi HC, Moon HP, McCouch SR. 1996. Molecular mapping of agene for resistance to a Korean isolate of rice blast. Rice Genet. Newsl. 13:74-76.Akagi H, Yokozeki Y, Inagaki A, Nakamura A, Fujimura T. 1996. A codominant DNA markerclosely linked to the rice nuclear restorer gene, Rf-1, identified with inter-SSR fingerprinting.Genome 39:1205-1209.Ayres NM, McClung AM, Larkin PD, Bligh HFJ, Jones CA, Park WD. 1997. Microsatellitesand a single-nucleotide polymorphism differentiate apparent amylose classes in an extendedpedigree of US rice germ plasm. Theor. Appl. Genet. 94:773-781.Botstein D, White RL, Skolnick M, Davis RW. 1980. Construction of a genetic linkage map inman using restriction fragment length polymorphism. Am. J. Hum. Genet. 32:314-331.Causse MA, Fulton TM, Cho YG, Ahn SN, Chunwongse J, Wu KS, Xiao JH, Yu ZH, RonaldPC, Harrington SE, Second G, McCouch SR, Tanksley SD. 1994. Saturated molecular mapof the rice genome based on an interspecific backcross population. Genetics 138:1251-1274.Chen DH, dela Vina M, Inukai T, Mackill DJ, Ronald PC, Nelson RJ. 1999. Molecular mappingof the blast resistance gene, Pi44(t), in a line derived from a durably resistant ricecultivar. Theor. Appl. Genet. 98:1046-1053.Chen S, Lin XH, Xu CG, Zhang QF. 2000. Improvement of bacterial blight resistance of ‘Minghui63’, an elite restorer line of hybrid rice, by molecular marker-assisted selection. Crop Sci.40:239-244.Chunwongse J, Martin GB, Tanksley SD. 1993. Pre-germination genotypic screening usingPCR amplification of half-seeds. Theor. Appl. Genet. 86:694-698.Dong NV, Subudhi PK, Luong PN, Quang VD, Quy TD, Zheng HG, Wang B, Nguyen HT.2000. Molecular mapping of a rice gene conditioning thermosensitive genic male sterilityusing AFLP, RFLP and SSR techniques. Theor. Appl. Genet. 100:727-734.Frisch M, Bohn M, Melchinger AE. 1999a. Comparison of selection strategies for markerassistedbackcrossing of a gene. Crop Sci. 39:1295-1301.Frisch M, Bohn M, Melchinger AE. 1999b. Minimum sample size and optimal positioning offlanking markers in marker-assisted backcrossing for transfer of a target gene. Crop Sci.39:967-975.Fujii K, Hayano-Saito Y, Sugiura N, Hayashi N, Saka N, Tooyama T, Izawa T, Shumiya A.1999. Gene analysis of panicle blast resistance in rice cultivars with rice stripe resistance.Breed. Res. 1:203-210.146 Mackill and Junjian Ni