Administering Platform LSF - SAS

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$Intel(R) Math Kernel Library for Linux* OS User's Guide$

Index disabling 317 job-level 317 queue-level 318 periodic tasks 522 per-job CPU limit 351 permissions log directory 520 remote execution 500 setuid badmin command 497 lsadmin command 497 per-process limits CPU limit 351 data segment size 352 file size 352 memory limit 352 stack segment size 355 pg load index, suspending conditions 362 pidentd daemon 496 PIM (Process Information Manager), resource use 143 pim.log.host_name file 522 PJOB_LIMIT parameter in lsb.queues 262 PluginModule section in lsb.modules, advance reservation 463 policies fairshare 202 tuning for LIM 483 port numbers, configuring for NIS or NIS+ databases 86 ports privileged, setuid authentication 496 registering daemon services 85 specifying dedicated 491 post_done job dependency condition 293, 367 POST_DONE post-execution job state 114, 367 post_err job dependency condition 293, 367 POST_ERR post-execution job state 114, 367 post-execution job dependency conditions 367 job states 367 post-execution commands configuring 368 overview 366 queue-level 367 running under user ID 369 pre-4.2 UNIX directory structure 59 PREEMPT_FOR parameter in lsb.params 182, 183, 460 preemptable jobs 178 queues 178 preemption, SLA scheduling 253 preemption and fairshare, advance reservation 472 PREEMPTION parameter in lsb.queues 181 preemptive jobs 178 queues 178 scheduling configuring 181 description 178 pre-execution commands configuring 368 job-level 367 overview 366 queue-level 367 running under user ID 369 preservestarter job starter 378 PRIORITY parameter in lsb.queues 213, 220 priority user fairshare 237 priority. See dynamic user priority privileged ports authentication (setuid) description 496 limitations 496 process allocation for parallel jobs 190, 199 PROCESSLIMIT parameter in lsb.queues 353 processor number for parallel jobs 438 reservation 450 processor reservation, configuring 450 processors, limiting for parallel jobs 447 programs, handling LSF events 478 project names, viewing resource allocation limits (blimits) 267 pseudo-terminal submitting interactive jobs with 402 using to run a task 417 PSUSP job state description 120 overview 112 pub/ident/server 496 PVM (Parallel Virtual Machine) job scripts 431 submitting jobs to LSF 433 PVM jobs, submitting 433 pvmjob parallel job script 433 Q qact badmin command 104 qclose badmin command 104 qinact badmin command 104 QJOB_LIMIT parameter in lsb.queues 262 qopen badmin command 104 queue administrators, displaying 62 queue dispatch windows 288 queue priority 45 queue thresholds, viewing 48 QUEUE_NAME parameter in lsb.queues 107 queue-level fairshare across queues 211 fairshare scheduling 210 job starter 376 making jobs checkpointable 315 migration threshold, configuring 321 periodic checkpointing 318 pre- and post-execution commands configuring 368 description 367 resource limits 348 resource requirements 187 resource reservation 271 run limits 349 queue-level resource information, viewing 275 574 Administering Platform LSF
Index queue-level resource limits, defaults 348 queues adding and removing 107 automatic selection 45 backfill queue 454 changing job order within 117 chunk job limitations 326 configuring for chunk jobs 325 job control actions 392 suspending conditions 363 default 45 dispatch windows 106 displaying queue administrators 62 exclusive 175 fairshare across queues 211 interactive 400 lost_and_found 107 overview 44 preemptive and preemptable 178 REQUEUE_EXIT_VALUES parameter 368 restricting host use 108 run windows 106 setting rerun level 305 specifying suspending conditions 363 viewing available 101 default 45 detailed queue information 101 for interactive jobs 401 history 102 job exception status 103 resource allocation limits (blimits) 267 status 101 viewing administrator of 56 R -R res_req command argument 190 r15m load index built-in resources 145 description 406 suspending conditions 362 r15s load index built-in resources 145 description 406 suspending conditions 362 r1m load index built-in resources 145 description 406 suspending conditions 362 rcp command 516 recurring advance reservation 466 remote connections, limitation to privileged ports authentication 496 remote execution authentication 493 permission 500 with lstcsh 551 remote jobs bringing background jobs to foreground 557 execution priority 148 remote mode in lstcsh 550 REQUEUE_EXIT_VALUES parameter in lsb.queues 301, 302 requeued jobs automatic 301 description 300 exclusive 303 reverse 302 user-specified 304 rerunnable jobs 305 rerunnable jobs, chunk jobs 328 RERUNNABLE parameter in lsb.queues 305 res.log.host_name file 522 resdebug command 541 reservation, advance 462, 463 reservation ID, advance reservation 471 resolv.conf file 88 resolver function 88 resource allocation limits configuring 261 viewing (blimits) 267 resource names aliases 192 description 154 resource requirements and task lists in lstcsh 549 description 186 for advance reservations 465 host type 186 ordering hosts 190, 194 parallel job locality 190, 198 parallel job processes 190, 199 parallel jobs, selecting hosts 199 resource reservation 195 resource usage 190, 195 select string 192 selecting hosts 190, 192, 199 resource reservation description 270 static shared resources 157 resource usage resource requirements 190, 195 viewing 143 resource usage limits ceiling 348 chunk job enforcement 347 configuring 348 conflicting 347 default 348 for deadline constraints 174 hard 348 maximum 348 priority 347 soft 348 specifying 348 ResourceMap section in lsf.cluster.cluster_name 155 ResourceReservation section in lsb.resources 463 resources See also load indices adding 153 adding custom 154 advance reservations 462 Administering Platform LSF 575
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Administering Platform LSF® Versio
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Contents Welcome . . . . . . . . .
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Contents Part II: Working with Reso
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Contents 17 Reserving Resources . .
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Contents 30 External Job Submission
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Contents 40 Non-Shared File Systems
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Welcome Contents ◆ “About This
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Welcome Command notation Notation M
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Welcome Platform LSF License Schedu
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Welcome Resource requirement specif
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Welcome Run-time enhancements Threa
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Welcome Environment variables ◆
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Welcome New files added to installa
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Technical Support Contact Platform
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C H A P T E R 1 About Platform LSF
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Chapter 1 About Platform LSF Job sl
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Chapter 1 About Platform LSF Master
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Chapter 1 About Platform LSF Master
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Chapter 1 About Platform LSF Host t
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Chapter 1 About Platform LSF Extern
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Chapter 1 About Platform LSF Job Li
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C H A P T E R 2 How the System Work
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Chapter 2 How the System Works Queu
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Chapter 2 How the System Works Disp
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Job Execution Environment Shared us
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Fault Tolerance Dynamic master host
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P A R T I Managing Your Cluster Con
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Viewing Cluster Information Viewing
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Default Directory Structures Defaul
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Default Directory Structures Window
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Controlling Daemons Controlling Dae
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Controlling mbatchd Controlling mba
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Reconfiguring Your Cluster 3 Run ba
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Host States Host States Host states
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Viewing Host Information Viewing Ho
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Viewing Host Information type Viewi
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Controlling Hosts Controlling Hosts
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Adding a Host Adding a Host Use lsf
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Removing a Host Removing a Host CAU
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Adding and Removing Hosts Dynamical
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Adding and Removing Hosts Dynamical
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Adding Host Types and Host Models t
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Registering Service Ports NIS or NI
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Host Naming Host Naming Network add
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Hosts with Multiple Addresses Examp
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Host Groups Host Groups Where to us
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Tuning CPU Factors Tuning CPU Facto
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Handling Host-level Job Exceptions
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Handling Host-level Job Exceptions
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Queue States Queue States Queue sta
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Viewing Queue Information SCHEDULIN
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Controlling Queues Controlling Queu
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Controlling Queues Dispatch Windows
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Managing Queues Managing Queues Res
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Handling Job Exceptions Configuring
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Job States Job States The bjobs com
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Job States Viewing wait status and
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Viewing Job Information Viewing exc
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Switching Jobs from One Queue to An
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Suspending and Resuming Jobs Suspen
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Sending a Signal to a Job Sending a
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Using Job Groups Creating a job gro
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Using Job Groups % bhist -l 105 You
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Viewing User and User Group Informa
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About User Groups About User Groups
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LSF User Groups LSF User Groups You
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LSF User Groups 134 Administering P
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C H A P T E R 8 Understanding Resou
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Chapter 8 Understanding Resources T
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Chapter 8 Understanding Resources S
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How LSF Uses Resources Viewing job
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Chapter 8 Understanding Resources S
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Chapter 8 Understanding Resources V
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Chapter 8 Understanding Resources A
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C H A P T E R 9 Adding Resources Co
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Adding New Resources to Your Cluste
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Chapter 9 Adding Resources Configur
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Static Shared Resource Reservation
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Chapter 9 Adding Resources Configur
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Chapter 9 Adding Resources ELIM res
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Modifying a Built-In Load Index Con
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P A R T III Scheduling Policies Con
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Specifying Time Values Specifying T
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Specifying Time Expressions Specify
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Automatic Time-based Configuration
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Deadline Constraint Scheduling Dead
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Exclusive Scheduling 176 Administer
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About Preemptive Scheduling About P
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How Preemptive Scheduling Works Job
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Configuring Preemptive Scheduling Q
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Configuring Preemptive Scheduling 1
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About Resource Requirements About R
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Queue-Level Resource Requirements V
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About Resource Requirement Strings
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Selection String Selection String S
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Order String Order String Syntax De
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Usage String Example rusage[mem=50:
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Span String Span String Syntax A sp
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Same String 200 Administering Platf
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About Fairshare Scheduling About Fa
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User Share Assignments Examples ◆
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Dynamic User Priority Default dynam
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Host Partition Fairshare Host Parti
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Queue-Level User-based Fairshare Qu
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Cross-queue Fairshare bqueues -l al
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Cross-queue Fairshare 3 In all the
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Hierarchical Fairshare Viewing hier
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Queue-based Fairshare Queue-based F
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Configuring Slot Allocation per Que
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Viewing Queue-based Fairshare Alloc
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Typical Slot Allocation Scenarios T
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Typical Slot Allocation Scenarios W
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Typical Slot Allocation Scenarios T
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Using Historical and Committed Run
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Using Historical and Committed Run
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Users Affected by Multiple Fairshar
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Ways to Configure Fairshare Ways to
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Ways to Configure Fairshare Example
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Using Goal-Oriented SLA Scheduling
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Using Goal-Oriented SLA Scheduling
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Configuring Service Classes for SLA
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Viewing Information about SLAs and
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Viewing Information about SLAs and
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Understanding Service Class Behavio
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C H A P T E R 16 Resource Allocatio
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Chapter 16 Resource Allocation Limi
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C H A P T E R 17 Reserving Resource
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Chapter 17 Reserving Resources Usin
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Chapter 17 Reserving Resources Usin
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Chapter 17 Reserving Resources View
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C H A P T E R 18 Managing Software
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Host Locked Licenses Chapter 18 Man
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Network Floating Licenses Chapter 1
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Chapter 18 Managing Software Licens
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C H A P T E R 19 Dispatch and Run W
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Run Windows Configuring run windows
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C H A P T E R 20 Job Dependencies C
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Chapter 20 Job Dependencies ◆ In
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Chapter 20 Job Dependencies externa
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C H A P T E R 21 Job Priorities Con
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Chapter 21 Job Priorities Specifyin
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C H A P T E R 22 Job Requeue and Jo
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Chapter 22 Job Requeue and Job Reru
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C H A P T E R 23 Job Checkpoint, Re
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Approaches to Checkpointing Kernel-
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Chapter 23 Job Checkpoint, Restart,
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Checkpointing a Job Prerequisites C
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Making Jobs Checkpointable Manually
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Enabling Periodic Checkpointing At
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Restarting Checkpointed Jobs Requir
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Chapter 23 Job Checkpoint, Restart,
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C H A P T E R 24 Chunk Job Dispatch
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Chapter 24 Chunk Job Dispatch Confi
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Submitting and Controlling Chunk Jo
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Chapter 24 Chunk Job Dispatch Fairs
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C H A P T E R Ë 25 Job Arrays LSF
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Chapter 25 Job Arrays Maximum size
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Redirecting Standard Input and Outp
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Chapter 25 Job Arrays Job Array Dep
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Chapter 25 Job Arrays Specific job
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Requeuing a Job Array Chapter 25 Jo
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P A R T V Controlling Job Execution
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About Resource Usage Limits About R
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Specifying Resource Usage Limits Sp
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Specifying Resource Usage Limits If
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Supported Resource Usage Limits and
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CPU Time and Run Time Normalization
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Automatic Job Suspension Automatic
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Suspending Conditions Suspending Co
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Suspending Conditions Viewing suspe
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About Pre-Execution and Post-Execut
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Configuring Pre- and Post-Execution
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Configuring Pre- and Post-Execution
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About Job Starters About Job Starte
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Command-Level Job Starters Command-
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Queue-Level Job Starters Queue-Leve
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Controlling Execution Environment U
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Understanding External Executables
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Using esub Option LSB_SUB_EXCEPTION
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Using esub General esub logic Rejec
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Using esub # Deny userC the ability
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Working with eexec Working with eex
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Default Job Control Actions Default
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Configuring Job Control Actions Con
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Configuring Job Control Actions Exa
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Customizing Cross-Platform Signal C
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C H A P T E R 32 Interactive Jobs w
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Chapter 32 Interactive Jobs with bs
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Interactive Batch Job Messaging Lim
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Running X Applications with bsub Ch
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C H A P T E R 33 Running Interactiv
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Chapter 33 Running Interactive and
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Interactive Tasks Chapter 33 Runnin
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P A R T VII Running Parallel Jobs C
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How LSF Runs Parallel Jobs How LSF
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Submitting Parallel Jobs Submitting
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Submitting MPI Jobs Submitting MPI
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Starting Parallel Tasks with LSF Ut
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Specifying a Minimum and Maximum Nu
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Specifying a Mandatory First Execut
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Controlling Processor Allocation Ac
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Running Parallel Processes on Homog
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Using LSF Make to Run Parallel Jobs
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Limiting the Number of Processors A
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Reserving Processors Reserving Proc
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Reserving Memory for Pending Parall
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Allowing Jobs to Use Reserved Job S
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Allowing Jobs to Use Reserved Job S
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Parallel Fairshare Parallel Fairsha
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Optimized Preemption of Parallel Jo
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About Advance Reservation About Adv
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Configuring Advance Reservation ◆
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Using Advance Reservation Adding a
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Using Advance Reservation Removing
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Using Advance Reservation 6:10 0 10
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Using Advance Reservation Modifying
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Using Advance Reservation 474 Admin
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C H A P T E R 36 Event Generation C
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Chapter 36 Event Generation Events
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C H A P T E R 37 Tuning the Cluster
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Adjusting LIM Parameters RUNWINDOW
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Chapter 37 Tuning the Cluster Compa
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Changing Default LIM Behavior to Im
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Chapter 37 Tuning the Cluster Whene
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Tuning mbatchd on UNIX Operating sy
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C H A P T E R 38 Authentication Con
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Chapter 38 Authentication eauth -c
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Chapter 38 Authentication How LSF d
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Chapter 38 Authentication Correctin
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Chapter 38 Authentication About Dae
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User Account Mapping Chapter 38 Aut
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C H A P T E R 39 Job Email, and Job
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Chapter 39 Job Email, and Job File
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C H A P T E R 40 Non-Shared File Sy
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Chapter 40 Non-Shared File Systems
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Chapter 40 Non-Shared File Systems
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C H A P T E R 41 Error and Event Lo
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Chapter 41 Error and Event Logging
Page 523 and 524: System Event Log CAUTION Chapter 41
Page 525 and 526: Chapter 41 Error and Event Logging
Page 527 and 528: C H A P T E R 42 Troubleshooting an
Page 529 and 530: Common LSF Problems LIM dies quietl
Page 531 and 532: Chapter 42 Troubleshooting and Erro
Page 543 and 544: Setting Daemon Timing Levels Chapte
Page 545: P A R T IX LSF Utilities Contents
Page 548 and 549: About lstcsh About lstcsh The lstcs
Page 550 and 551: Local and Remote Modes Local and Re
Page 552 and 553: Differences from Other Shells Diffe
Page 554 and 555: Starting lstcsh Starting lstcsh Sta
Page 556 and 557: Host Redirection Host Redirection E
Page 558 and 559: Built-in Commands Built-in Commands
Page 560 and 561: Writing Shell Scripts in lstcsh Wri
Page 562 and 563: Index job migration 321 job requeue
Page 564 and 565: Index D daemons authd 496 authentic
Page 566 and 567: Index file spooling. See command fi
Page 568 and 569: Index Internet addresses, matching
Page 570 and 571: Index host locked 279 interactive j
Page 572 and 573: Index pre-42 UNIX directory structu
Page 576 and 577: Index associating with hosts 155 Bo
Page 578 and 579: Index status closed in bhosts 70 jo
Page 580: Index 580 Administering Platform LS
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