Administering Platform LSF - SAS

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$Intel(R) Math Kernel Library for Linux* OS User's Guide$

Index associating with hosts 155 Boolean 140 built-in 144 configuring custom 154 configuring limits 261 custom 152 host-level 275 queue-level 275 shared 141, 142 types 140 viewing available 56, 138 host load 139 shared 56 restime command 543 restrictions chunk job queues 326 lsrcp command 518 lstcsh 553 number of remote connections 496 RESUME job control action 391 resume thresholds, viewing 364 RESUME_COND parameter in lsb.queues 391 reverse requeue 302 rexpri static resource 148 RFC 1413 and RFC 931 protocols, identification daemon authentication 496 .rhosts file troubleshooting 530 disadvantages 500 file transfer with lsrcp 518 host authentication 500 rlogin command interactive terminals 405 privileged ports authentication 496 rsh command lsfrestart 62 privileged ports authentication 496 RUN job state, overview 112 run limits ceiling 348 configuring 346, 353 default 349 maximum 348 specifying 356 run queue effective 145 normalized 145 suspending conditions 362 run time decayed 230 historical 230 normalization 357 run time limit, non-normalized (absolute) 354 run windows description 287 queues 106 tuning for LIM 483 RUN_WINDOW, queues 106 RUNLIMIT parameter in lsb.queues 353 running jobs, viewing 112 rusage resource requirements section 190 resource reservation 270 usage string syntax 195 ruserok function, authentication using /etc/hosts.equiv 500 S same string 199 sample /etc/hosts file entries 90 sbatchd (slave batch daemon) remote file access 516 restarting 63 shutting down 63 sbatchd.log.host_name file 522 sbddebug command 541 sbdtime command 543 schddebug command 541 schddtime command 543 scheduling exclusive 175 fairshare 202 hierarchical fairshare 215 preemptive configuring 181 description 178 service level agreement (SLA) 240 threshold host selection 48 queue-level resource requirements 187 schmod_advrsv plugin for advance reservation 463 scripts check_license for counted software licenses 280 lic_starter to manage software licenses 284 mpijob 434 p4job 433 pvmjob 433 redirecting to standard input for interactive jobs 411 writing for interactive jobs 410 writing in lstcsh 560 security LSF authentication 498 user authentication 497 selection string 192 server hosts, viewing detailed information 70 server static resource 148 server status closed 70 service class configuring 243 examples 244 goal-oriented scheduling 241 service classes bacct command 246, 247 description 240 submitting jobs 241 service database examples 85 service level agreement. See SLA scheduling service level goals job preemption 253 optimum number of running jobs 241 576 Administering Platform LSF
Index service classes 241 service ports (TCP and UDP), registering 85 setuid authentication 496 permission badmin command 497 lsadmin 497 privileged ports authentication 496 setuid permissions 530 SGI IRIX. See IRIX share assignments 203 share tree 217 shared file systems, using LSF without 515 shared files 528 shared resources description 141 static reserving 157 update interval 158 viewing 142 shared user directories 49 shares fairshare assignment 203 viewing user share information 129 shell mode, enabling 420 shell scripts. See scripts shell variables and lstcsh 553 shells default shell for interactive jobs 412 lstcsh 552 specifying for interactive jobs 412 short-running jobs, as chunk jobs 324 SIGCONT signal default RESUME action 391 job control actions 122 SIGINT signal conversion to Windows NT 395 default TERMINATE action 391 job control actions 122 SIGKILL signal default TERMINATE action 391 job control actions 122 sending a signal to a job 122 signals avoiding job action deadlock 394 configuring SIGSTOP 120, 390, 394 converting 395 customizing conversion 395 sending to a job 122 SIGINT 122 SIGTERM 122 SIGQUIT signal, conversion to Windows NT 395 SIGSTOP signal bstop 120 configuring 120, 390, 394 default SUSPEND action 390 job control actions 122 SIGTERM signal default TERMINATE action 391 job control actions 122 SIGTSTP signal bstop 120 default SUSPEND action 390 SLA scheduling bacct command 247 bsla command 246 configuring 243 deadline goals 240 delayed goals 253 description 240 job preemption 253 missed goals 253 optimum number of running jobs 241 service classes description 240 examples 244 service level goals 241 submitting jobs 241 velocity goals 240 violation period 253 SLOT_POOL parameter, in lsb.queues 220 SLOT_SHARE parameter in lsb.queues 220 soft resource limits data segment size 352 description 346 example 348 file size 352 memory usage 352 stack segment size 355 software licenses counted 280 floating dedicated queue for 282 description 281 host locked 279 interactive jobs competing with batch jobs 283 managing 284 managing with LSF 278 span string 198 spooling. See command file spooling, job file spooling SSUSP job state description 120 overview 112 stack segment size limit 355 STACKLIMIT parameter in lsb.queues 355 standard input and error, splitting for interactive jobs 402 standard input and output for eauth 495 job arrays 335 passing data between esub and eexec 388 standard output and error, redirecting to a file 421 started job dependency condition 293 static priority fairshare 238 static resources See also individual resource names description 148 shared reserving 157 update interval 158 STATUS, bhosts 68 Administering Platform LSF 577
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Administering Platform LSF® Versio
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Contents Welcome . . . . . . . . .
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Contents Part II: Working with Reso
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Contents 17 Reserving Resources . .
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Contents 30 External Job Submission
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Contents 40 Non-Shared File Systems
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Welcome Contents ◆ “About This
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Welcome Command notation Notation M
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Welcome Platform LSF License Schedu
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Welcome Resource requirement specif
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Welcome Run-time enhancements Threa
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Welcome Environment variables ◆
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Welcome New files added to installa
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Technical Support Contact Platform
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C H A P T E R 1 About Platform LSF
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Chapter 1 About Platform LSF Job sl
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Chapter 1 About Platform LSF Master
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Chapter 1 About Platform LSF Master
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Chapter 1 About Platform LSF Host t
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Chapter 1 About Platform LSF Extern
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Chapter 1 About Platform LSF Job Li
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C H A P T E R 2 How the System Work
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Chapter 2 How the System Works Queu
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Chapter 2 How the System Works Disp
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Job Execution Environment Shared us
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Fault Tolerance Dynamic master host
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P A R T I Managing Your Cluster Con
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Viewing Cluster Information Viewing
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Default Directory Structures Defaul
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Default Directory Structures Window
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Controlling Daemons Controlling Dae
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Controlling mbatchd Controlling mba
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Reconfiguring Your Cluster 3 Run ba
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Host States Host States Host states
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Viewing Host Information Viewing Ho
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Viewing Host Information type Viewi
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Controlling Hosts Controlling Hosts
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Adding a Host Adding a Host Use lsf
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Removing a Host Removing a Host CAU
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Adding and Removing Hosts Dynamical
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Adding and Removing Hosts Dynamical
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Adding Host Types and Host Models t
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Registering Service Ports NIS or NI
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Host Naming Host Naming Network add
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Hosts with Multiple Addresses Examp
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Host Groups Host Groups Where to us
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Tuning CPU Factors Tuning CPU Facto
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Handling Host-level Job Exceptions
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Handling Host-level Job Exceptions
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Queue States Queue States Queue sta
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Viewing Queue Information SCHEDULIN
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Controlling Queues Controlling Queu
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Controlling Queues Dispatch Windows
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Managing Queues Managing Queues Res
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Handling Job Exceptions Configuring
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Job States Job States The bjobs com
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Job States Viewing wait status and
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Viewing Job Information Viewing exc
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Switching Jobs from One Queue to An
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Suspending and Resuming Jobs Suspen
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Sending a Signal to a Job Sending a
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Using Job Groups Creating a job gro
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Using Job Groups % bhist -l 105 You
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Viewing User and User Group Informa
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About User Groups About User Groups
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LSF User Groups LSF User Groups You
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LSF User Groups 134 Administering P
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C H A P T E R 8 Understanding Resou
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Chapter 8 Understanding Resources T
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Chapter 8 Understanding Resources S
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How LSF Uses Resources Viewing job
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Chapter 8 Understanding Resources S
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Chapter 8 Understanding Resources V
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Chapter 8 Understanding Resources A
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C H A P T E R 9 Adding Resources Co
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Adding New Resources to Your Cluste
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Chapter 9 Adding Resources Configur
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Static Shared Resource Reservation
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Chapter 9 Adding Resources Configur
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Chapter 9 Adding Resources ELIM res
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Modifying a Built-In Load Index Con
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P A R T III Scheduling Policies Con
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Specifying Time Values Specifying T
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Specifying Time Expressions Specify
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Automatic Time-based Configuration
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Deadline Constraint Scheduling Dead
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Exclusive Scheduling 176 Administer
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About Preemptive Scheduling About P
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How Preemptive Scheduling Works Job
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Configuring Preemptive Scheduling Q
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Configuring Preemptive Scheduling 1
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About Resource Requirements About R
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Queue-Level Resource Requirements V
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About Resource Requirement Strings
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Selection String Selection String S
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Order String Order String Syntax De
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Usage String Example rusage[mem=50:
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Span String Span String Syntax A sp
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Same String 200 Administering Platf
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About Fairshare Scheduling About Fa
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User Share Assignments Examples ◆
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Dynamic User Priority Default dynam
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Host Partition Fairshare Host Parti
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Queue-Level User-based Fairshare Qu
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Cross-queue Fairshare bqueues -l al
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Cross-queue Fairshare 3 In all the
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Hierarchical Fairshare Viewing hier
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Queue-based Fairshare Queue-based F
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Configuring Slot Allocation per Que
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Viewing Queue-based Fairshare Alloc
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Typical Slot Allocation Scenarios T
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Typical Slot Allocation Scenarios W
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Typical Slot Allocation Scenarios T
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Using Historical and Committed Run
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Using Historical and Committed Run
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Users Affected by Multiple Fairshar
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Ways to Configure Fairshare Ways to
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Ways to Configure Fairshare Example
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Using Goal-Oriented SLA Scheduling
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Using Goal-Oriented SLA Scheduling
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Configuring Service Classes for SLA
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Viewing Information about SLAs and
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Viewing Information about SLAs and
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Understanding Service Class Behavio
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C H A P T E R 16 Resource Allocatio
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Chapter 16 Resource Allocation Limi
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C H A P T E R 17 Reserving Resource
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Chapter 17 Reserving Resources Usin
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Chapter 17 Reserving Resources Usin
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Chapter 17 Reserving Resources View
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C H A P T E R 18 Managing Software
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Host Locked Licenses Chapter 18 Man
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Network Floating Licenses Chapter 1
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Chapter 18 Managing Software Licens
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C H A P T E R 19 Dispatch and Run W
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Run Windows Configuring run windows
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C H A P T E R 20 Job Dependencies C
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Chapter 20 Job Dependencies ◆ In
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Chapter 20 Job Dependencies externa
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C H A P T E R 21 Job Priorities Con
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Chapter 21 Job Priorities Specifyin
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C H A P T E R 22 Job Requeue and Jo
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Chapter 22 Job Requeue and Job Reru
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C H A P T E R 23 Job Checkpoint, Re
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Approaches to Checkpointing Kernel-
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Chapter 23 Job Checkpoint, Restart,
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Checkpointing a Job Prerequisites C
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Making Jobs Checkpointable Manually
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Enabling Periodic Checkpointing At
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Restarting Checkpointed Jobs Requir
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Chapter 23 Job Checkpoint, Restart,
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C H A P T E R 24 Chunk Job Dispatch
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Chapter 24 Chunk Job Dispatch Confi
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Submitting and Controlling Chunk Jo
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Chapter 24 Chunk Job Dispatch Fairs
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C H A P T E R Ë 25 Job Arrays LSF
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Chapter 25 Job Arrays Maximum size
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Redirecting Standard Input and Outp
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Chapter 25 Job Arrays Job Array Dep
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Chapter 25 Job Arrays Specific job
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Requeuing a Job Array Chapter 25 Jo
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P A R T V Controlling Job Execution
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About Resource Usage Limits About R
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Specifying Resource Usage Limits Sp
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Specifying Resource Usage Limits If
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Supported Resource Usage Limits and
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CPU Time and Run Time Normalization
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Automatic Job Suspension Automatic
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Suspending Conditions Suspending Co
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Suspending Conditions Viewing suspe
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About Pre-Execution and Post-Execut
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Configuring Pre- and Post-Execution
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Configuring Pre- and Post-Execution
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About Job Starters About Job Starte
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Command-Level Job Starters Command-
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Queue-Level Job Starters Queue-Leve
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Controlling Execution Environment U
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Understanding External Executables
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Using esub Option LSB_SUB_EXCEPTION
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Using esub General esub logic Rejec
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Using esub # Deny userC the ability
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Working with eexec Working with eex
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Default Job Control Actions Default
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Configuring Job Control Actions Con
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Configuring Job Control Actions Exa
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Customizing Cross-Platform Signal C
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C H A P T E R 32 Interactive Jobs w
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Chapter 32 Interactive Jobs with bs
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Interactive Batch Job Messaging Lim
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Running X Applications with bsub Ch
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C H A P T E R 33 Running Interactiv
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Chapter 33 Running Interactive and
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Interactive Tasks Chapter 33 Runnin
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P A R T VII Running Parallel Jobs C
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How LSF Runs Parallel Jobs How LSF
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Submitting Parallel Jobs Submitting
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Submitting MPI Jobs Submitting MPI
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Starting Parallel Tasks with LSF Ut
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Specifying a Minimum and Maximum Nu
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Specifying a Mandatory First Execut
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Controlling Processor Allocation Ac
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Running Parallel Processes on Homog
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Using LSF Make to Run Parallel Jobs
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Limiting the Number of Processors A
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Reserving Processors Reserving Proc
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Reserving Memory for Pending Parall
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Allowing Jobs to Use Reserved Job S
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Allowing Jobs to Use Reserved Job S
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Parallel Fairshare Parallel Fairsha
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Optimized Preemption of Parallel Jo
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About Advance Reservation About Adv
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Configuring Advance Reservation ◆
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Using Advance Reservation Adding a
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Using Advance Reservation Removing
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Using Advance Reservation 6:10 0 10
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Using Advance Reservation Modifying
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Using Advance Reservation 474 Admin
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C H A P T E R 36 Event Generation C
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Chapter 36 Event Generation Events
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C H A P T E R 37 Tuning the Cluster
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Adjusting LIM Parameters RUNWINDOW
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Chapter 37 Tuning the Cluster Compa
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Changing Default LIM Behavior to Im
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Chapter 37 Tuning the Cluster Whene
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Tuning mbatchd on UNIX Operating sy
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C H A P T E R 38 Authentication Con
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Chapter 38 Authentication eauth -c
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Chapter 38 Authentication How LSF d
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Chapter 38 Authentication Correctin
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Chapter 38 Authentication About Dae
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User Account Mapping Chapter 38 Aut
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C H A P T E R 39 Job Email, and Job
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Chapter 39 Job Email, and Job File
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C H A P T E R 40 Non-Shared File Sy
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Chapter 40 Non-Shared File Systems
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Chapter 40 Non-Shared File Systems
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C H A P T E R 41 Error and Event Lo
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Chapter 41 Error and Event Logging
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System Event Log CAUTION Chapter 41
Page 525 and 526: Chapter 41 Error and Event Logging
Page 527 and 528: C H A P T E R 42 Troubleshooting an
Page 529 and 530: Common LSF Problems LIM dies quietl
Page 531 and 532: Chapter 42 Troubleshooting and Erro
Page 543 and 544: Setting Daemon Timing Levels Chapte
Page 545: P A R T IX LSF Utilities Contents
Page 548 and 549: About lstcsh About lstcsh The lstcs
Page 550 and 551: Local and Remote Modes Local and Re
Page 552 and 553: Differences from Other Shells Diffe
Page 554 and 555: Starting lstcsh Starting lstcsh Sta
Page 556 and 557: Host Redirection Host Redirection E
Page 558 and 559: Built-in Commands Built-in Commands
Page 560 and 561: Writing Shell Scripts in lstcsh Wri
Page 562 and 563: Index job migration 321 job requeue
Page 564 and 565: Index D daemons authd 496 authentic
Page 566 and 567: Index file spooling. See command fi
Page 568 and 569: Index Internet addresses, matching
Page 570 and 571: Index host locked 279 interactive j
Page 572 and 573: Index pre-42 UNIX directory structu
Page 574 and 575: Index disabling 317 job-level 317 q
Page 578 and 579: Index status closed in bhosts 70 jo
Page 580: Index 580 Administering Platform LS
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