TUOLUMNE RIVER TECHNICAL ADVISORY COMMITTEEHABITAT RESTORATION PLAN FOR THE LOWER TUOLUMNE RIVER CORRIDORTable 2-10. <strong>Fish</strong>es of the lower <strong>Tuolumne</strong> <strong>River</strong> observed since 1981 in TID/MID fishery studies. N=Native.CHAPTER 2Petromyzontidae - lampreysPacific lamprey, Lampetra tridentata (Gairdner, 1836)river lamprey, Lampetra ayresi (Gunther, 1870)Acipenseridae - sturgeonswhite sturgeon, Acipenser transmontanus (Richardson, 1836)Clupeidae - herringsAmerican shad, Alosa sapidissima (Wilson, 1811)threadfin shad, Dorosoma petenense (Ghnther, 1867)Cyprinidae - carps <strong>and</strong> minnowscommon carp, Cyprinus carpio (Linnaeus, 1758)goldfish, Carassius auratus (Linnaeus, 1758)golden shiner, Notemigonus crysoleucas (Mitchell, 1814)hitch, Lavinia exilicauda (Baird & Girard, 1854)Sacramento blackfish, Orthodon microlepidotus (Ayres, 1854)Sacramento splittail, Pogonichthys macrolepidotus (Ayres, 1854)hardhead, Mylopharodon conocephalus (Baird & Girard, 1854)Sacramento pikeminnow, Ptychocheilus gr<strong>and</strong>is (Ayres, 1854)red shiner, Cyprinella lutrensis (Baird & Girard, 1853)fathead minnow, Pimephales promelas (Rafinesque, 1820)Catostomidae - suckersSacramento sucker, Catostomus occidentalis (Ayres, 1854)Ictaluridae - bullhead catfisheswhite catfish, Ameiurus catus (Linnaeus, 1758)brown bullhead, Ameiurus nebulosus (Lesueur, 1819)black bullhead, Ameiurus melas (Lesueur, 1819)channel catfish, Ictalurus punctatus (Rafinesque, 1918)Salmonidae - troutschinook salmon, Oncorhynchus tshawytscha (Walbaum, 1792)rainbow trout, Oncorhynchus mykiss (Walbaum, 1792)Poeciliidae - livebearerswestern mosquitofish, Gambusia affinis (Baird & Girard, 1853)Atherinidae - silversidesinl<strong>and</strong> silverside, Menidia beryllina (Cope, 1866)Cottidae - sculpinsprickly sculpin, Cottus asper (Richardson, 1836)riffle sculpin, Cottus gulosus (Girard, 1854)Percichthyidae - temperate bassesstriped bass, Morone saxatilis (Walbaum, 1792)Centrarchidae - sunfishesblack crappie, Pomoxis nigromaculatus (Lesueur, 1829)white crappie, Pomoxis annularis (Rafinesque, 1818)warmouth, Lepomis gulosus (Cuvier, 1829)green sunfish, Lepomis cyanellus (Rafinesque, 1819)bluegill, Lepomis macrochirus (Rafinesque, 1819)redear sunfish, Lepomis microlophus (Gunther, 1859)largemouth bass, Micropterus salmoides (Lacepede, 1802)smallmouth bass, Micropterus dolomieu (Lacepede, 1802)Percidae - perchesbigscale logperch, Percina macrolepida (Stevenson, 1971)Embiotocidae - surfperchestule perch, Hysterocarpus traski (Gibbons, 1854)NNNNNNNNNNNNNNAll Species: 37Native Species: 1474
LINKING PHYSICAL PROCESSES AND SALMON LIFE HISTORYupon which proposed restoration objectives arebased (see Section 2.3). Restoring these attributescan occur within pre-existing humansocioeconomic <strong>and</strong> infrastructural constraints(e.g., a regulated water supply <strong>and</strong> l<strong>and</strong> use withinthe river corridor), as will be shown in section 3.2regarding flood releases for channel maintenancepurposes. Restoring the Attributes will restore <strong>and</strong>help sustain the myriad of habitats needed tosupport the native populations that inhabit the<strong>Tuolumne</strong> <strong>River</strong>, including habitats essential forsalmon production. These Attributes were used togenerate the following hydrologic <strong>and</strong> geomorphicrestoration objectives, <strong>and</strong> allowed us topredict the expected benefits to chinook salmon:A. Encourage inter-annual <strong>and</strong> seasonal flowvariability.Considering adaptations in the life history ofchinook salmon <strong>and</strong> other organisms to specificenvironment conditions will allow us to use theseadaptations to our advantage. For example,varying flows during spawning would make thebest use of available habitat by distributing fish<strong>and</strong> encouraging use of all available habitat.Restoring alternate bar sequences would providequality rearing habitat at a variable range offlows. This restoration strategy is already acknowledgedto a limited extent by the use ofspring <strong>and</strong> fall pulse flows for improvingoutmigration <strong>and</strong> immigration conditions.B. Increase the magnitude <strong>and</strong> frequency ofshort duration peak flows to initiate bedmobility <strong>and</strong> localized scour/deposition.Mobilizing bed surfaces exposes fine sediment fordownstream transport <strong>and</strong> deposition on floodplainsurfaces, which, combined with reduced finesediment supply <strong>and</strong> increased coarse sedimentsupply, should reduce fine sediment storage <strong>and</strong>increase the quality <strong>and</strong> quantity of spawning <strong>and</strong>fry rearing habitat.Combining coarse sediment introduction withchannel reconstruction (restoring bedloadimpedance reaches) will help restore bedloadrouting downstream, thereby replenishingspawning gravels <strong>and</strong> gravel bars throughout thegravel-bedded reaches.Restoring flows of sufficient magnitude <strong>and</strong>frequency to inundate contemporary <strong>and</strong> restoredfloodplain surfaces will deposit fine sedimentsderived from the low water channel onto floodplainsurfaces instead of in spawning gravel, <strong>and</strong>will encourage floodplain development/processes.C. Increase the magnitude <strong>and</strong> frequency of peakflows to initiate bed scour on alluvialdeposits along the low water margin toreduce riparian encroachment.Mobilization of exposed bar surfaces will discouragefossilization of short-term alluvial deposits byreducing riparian encroachment along the lowwater channel margins, preserving these marginsfor fry rearing habitat, <strong>and</strong> maintaining theavailability of gravel/cobble storage deposits foreventual downstream routing.D. Increase coarse sediment input to balancemainstem transport capacityRestoring coarse sediment supply (particularlyspawning gravels between 8 mm to 128 mm) inthe gravel-bedded reaches will provide immediatespawning <strong>and</strong> rearing habitat, <strong>and</strong> will eventuallyroute downstream to replenish other bars.Introducing clean gravels, combined withreducing fine sediment input, will increasespawning <strong>and</strong> rearing habitat quality <strong>and</strong> quantity,increasing juvenile production.Cleaner alluvium (reduced silt <strong>and</strong> s<strong>and</strong>embeddedness) will also improve aquatic invertebratehabitat <strong>and</strong> prouctivity, the primary foodresource for juvenile salmon.E. Reduce fine sediment input into the river.Reducing fine sediment input to the river,particularly near La Grange, will improvespawning <strong>and</strong> rearing habitat conditions, <strong>and</strong>increase the longevity of gravel quality improvementefforts.Reducing fine sediment input, combined with highflows that transport <strong>and</strong> deposit fine sedimentonto floodplain surfaces, will reduce instreamstorage of fine sediment, increase pool depth,improve spawning <strong>and</strong> rearing habitat quality, <strong>and</strong>improve salmon emergence <strong>and</strong> rearing success.CHAPTER 275
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REFERENCESREFERENCESAlderdice, D. F
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REFERENCESKjelson, M. A., P. F. Raq
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REFERENCESTID (Turlock Irrigation D
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APPENDIX AAPPENDIX AANNUAL HYDROGRA
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VEGETATION SERIESNATURAL DIVERSITY
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215Scientific Name Common Name Loca
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APPENDIX BAPPENDIX B217