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Download pdf guide - VSN International

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15 Examples 2973.74 0.97 0.019 0.941!PATH 24 0 FA1 !GP # Factor Analytic 1.5 .5 .01 .14.95 4.63 0.037 0.941!PATH 34 0 US # Unstructured5.0733.545 3.9140.1274 0.08909 0.028650.07277 0.05090 0.001829 1.019!PATHlitTable 15.15: Variance models fitted for each part of the ASReml job in the analysisof the genetic exampleterm matrix !PATH 1 !PATH 2 !PATH 3sire Σ s DIAG FA1 USdam Σ d CORGH CORGH USlitter Σ l DIAG FA1 USerror Σ e US US USIn !PATH 1, the error variance model is taken to be unstructured, but the startingvalues are set to zero. This instructs ASReml to obtain starting values from thesample covariance matrix of the data. For incomplete data the matrix so obtainedmay not, in general be positive definite. Care should be taken when using thisoption for incomplete multivariate data. The command to run !PATH 1 isasreml -nrw64 mt 1The Loglikelihood from this run is −20000 − 1444.93. When the job runs, themessageNon positive definite G matrix:order 30 singularities 1 negative pivots;appears to the screen. This refers to the 3 × 3 dam matrix which is estimated as

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