Review of the Food-borne Zoonoses Research ... - ARCHIVE: Defra
Review of the Food-borne Zoonoses Research ... - ARCHIVE: Defra
Review of the Food-borne Zoonoses Research ... - ARCHIVE: Defra
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Campylobacter <strong>Research</strong> Projects<br />
Project code: OZ0604<br />
Project title: Characterisation <strong>of</strong> strain variation in Campylobacter<br />
jejuni.<br />
Start date (dd/mm/yy): 01/04/1999<br />
End date (dd/mm/yy): 30/09/2004<br />
£774,549<br />
Total cost:<br />
Affiliation: University <strong>of</strong> Oxford<br />
Sub-contractor(s): HPA<br />
Project code: OZ0611<br />
Project title: Development <strong>of</strong> a comprehensive MLST database for<br />
assessment <strong>of</strong> Campylobacter risk factors<br />
Start date (dd/mm/yy): 01/07/2005<br />
End date (dd/mm/yy): 30/06/2008<br />
£503,312.00<br />
Total cost:<br />
Affiliation: University <strong>of</strong> Oxford<br />
Sub-contractor(s):<br />
Abstract <strong>of</strong> research<br />
OZ0604<br />
Campylobacter species, particularly Campylobacter jejuni, are a major cause <strong>of</strong> human<br />
gastro-enteritis in <strong>the</strong> UK and elsewhere. In <strong>the</strong> majority <strong>of</strong> infections, which are<br />
sporadic, <strong>the</strong> precise epidemiology is not determined, although several food producing<br />
animals have been implicated as important sources <strong>of</strong> infection. The epidemiology <strong>of</strong><br />
zoonotic transmission <strong>of</strong> C. jejuni to man remains obscure due to inconsistencies within<br />
and between <strong>the</strong> various phenotyping and molecular typing methods used to<br />
characterise C. jejuni isolates. These inconsistencies arise from <strong>the</strong> inability <strong>of</strong> <strong>the</strong><br />
current methods to unambiguously define strain types and genetic lineages, and <strong>the</strong> lack<br />
<strong>of</strong> precise understanding <strong>of</strong> <strong>the</strong> variation which <strong>the</strong>y index. This work will address <strong>the</strong>se<br />
problems, definitively establishing <strong>the</strong> range and mechanisms <strong>of</strong> genetic variability in<br />
populations <strong>of</strong> C. jejuni, by <strong>the</strong> application <strong>of</strong> <strong>the</strong> most recently developed sequence<br />
typing technologies to a minimum <strong>of</strong> 1500 isolates, representative <strong>of</strong> those obtained from<br />
human infections, farm animals, <strong>the</strong> human food chain, and <strong>the</strong> environment. Multilocus<br />
sequence typing (MLST), which identifies strain relationships on <strong>the</strong> basis <strong>of</strong> neutral<br />
variation in housekeeping genes, and antigen gene sequence typing, which will be used<br />
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