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Research Report 2010 2011 - Helmholtz-Zentrum für ...

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124 SCIENTIFIC REPORTS | PoFII Independent <strong>Research</strong><br />

03 Structural Analysis of the Innate Immune System<br />

PROJECT LEADER | Prof. Dr. Wolf-Dieter Schubert | Former <strong>Research</strong> Group Molecular Host-Pathogen<br />

Interactions | Department of Biotechnology, University of the Western Cape, Cape Town, South Africa |<br />

wschubert@uwc.ac.za<br />

PROJECT MEMBERS | Nils Kuklik | Clive Mketsu | Mujaahida Mohammed | Edukondalu Mullapudi | Lilia Polle |<br />

Donné Simpson | Jason Stark<br />

In the <strong>Research</strong> Group “Molecular Host-Pathogen Interactions”<br />

(MHPI) we previously focussed on the molecular<br />

details of human defence mechanisms against invading<br />

pathogens (innate immunity) as well as the corresponding<br />

molecular strategies of pathogens in infecting humans.<br />

Novel Listerial Virulence Factors InlJ and Auto The bacterium<br />

Listeria monocytogenes infects humans following the<br />

consumption of contaminated food. To breach the intestinal<br />

barrier and for all steps of the infection process Listeria has<br />

evolved a dedicated set of highly specific protein factors that<br />

it produces and secretes in a highly coordinated manner. To<br />

understand how their physical structure relates to their physiological<br />

function, we have undertaken to investigate their<br />

three-dimensional structure at the atomic level of resolution.<br />

“Auto” The cell wall of Gram-positive bacteria is a complex<br />

envelope that helps cells to maintain their shape and to<br />

counteract the turgor pressure of their cytosol. It consists of<br />

long, linear chains of alternating sugar residues (N-acetylglucosamine<br />

and N-acetylmuramic acid) crosslinked by short<br />

peptides. Cell growth, cell division and many other processes<br />

crucially depend on the constant remodelling of the cell wall.<br />

Enzymes involved in this process are generally referred to as<br />

autolysins.<br />

Studies revealed that only one of the autolysins is involved<br />

in the pathogenesis of Listeria monocytogenes. This autolysin<br />

named “Auto” is essential for listerial entry into numerous<br />

eukaryotic cell lines.<br />

Left: Crystal structure of autolysin Auto of L. monocytogenes<br />

is depicted in cartoon style and with transparent surface.<br />

The active site of the pro-enzyme is blocked by an N-terminal<br />

α-helix (red). Right: Crystal structure of InlJ (right) with enlarged<br />

view of the cysteine ladder (left): reduced cysteines align<br />

in the hydrophobic core (Sulphur - yellow). Graphics: HZI<br />

Auto is an N-acetylglucosaminidase, meaning that it cleaves<br />

the sugar backbone of the cell wall exposing the reducing<br />

end of N-acetylglucosamine. Solving the crystal structure<br />

of Auto we observed that it is structurally related to lytic<br />

transglycosylases and some lysozymes despite catalysing an<br />

unrelated chemical reaction. By mutating residues potentially<br />

involved in catalysis, we identified the glutamic acid residues<br />

Glu122 and Glu156 as being essential for the enzymatic<br />

reaction. Fascinatingly, we found that Auto, as originally produced,<br />

is autoinhibited by an N-terminal α-helix. Its specific<br />

N-terminal cleavage by an as yet unidentified protease following<br />

an extracellular signal may, therefore, allow its rapid<br />

and coordinated activation. In addition, Auto has a highly<br />

acidic pH optimum making it essentially inactive at a pH of 7.<br />

Overall we interpret our data to indicate that Auto participates<br />

in liberating the pathogen from the partially acidified<br />

phagolysosome. By increasing the porosity of the cell wall it<br />

would help to coordinate the release of other virulence factors<br />

such as listeriolysin. Their activity in turn would result<br />

in the breaching of the phagolysosomal membrane, raising<br />

the pH to physiological levels and de-activating Auto.<br />

InlJ The internalin family of proteins constitutes a group<br />

of virulence factors of Listeria monocytogenes. The founding<br />

member, Internalin or InlA, is central to the forced uptake<br />

of the bacterium into epithelial cells of the human small intestine.<br />

Only recently this family was found to possess an additional,<br />

previously unrecognized member, InlJ. This protein<br />

has been shown to be crucial to bacterial adhesion to host<br />

cells. InlJ is distinct from other family members in that its 16<br />

LRR units mostly comprise 21 rather than the standard 22<br />

residues and by one LRR-defining hydrophobic residue being<br />

replaced with a conserved cysteine. Solving the crystal structure<br />

of this protein we could show that the cysteines line up<br />

to form a unique cysteine ladder in consecutive repeats. InlJ<br />

thus presents a very rare case of an extracellular protein<br />

(oxidizing environment) bearing a large number of reduced<br />

cysteine residues. This implies that the cysteines must serve<br />

to significantly stabilize the structure, offsetting the danger<br />

of its unfolding followed by cysteine oxidation.<br />

Bröcker, M.J., Schomburg, S., Heinz, D.W., Jahn, D., Schubert, W.-D., & Moser, J (<strong>2010</strong>)<br />

Crystal structure of the nitrogenase-like dark operative protochlorophyllide oxidoreductase<br />

catalytic complex (ChlN/ChlB)2. Journal of Biological Chemistry 285, 27336-27345.<br />

Heinemann, I.U., Schulz, C., Schubert, W.-D., Heinz, D.W., Wang, Y.G., Kobayashi, Y.,<br />

Awa, Y., Wachi, M., Jahn, D., & Jahn, M. (<strong>2010</strong>) Structure of the heme biosynthetic<br />

Pseudomonas aeruginosa porphobilinogen synthase in complex with the antibiotic<br />

alaremycin. Antimicrobial Agents and Chemotherapy 54, 267-272.<br />

Bublitz, M., Polle, L., Holland, C., Heinz, D.W., Nimtz, M., & Schubert, W.-D. (2009)<br />

Structural basis for autoinhibition and activation of Auto, a virulence-associated peptidoglycan<br />

hydrolase of L. monocytogenes. Molecular Microbiology 71, 1509–1522.

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