Research Report 2010 2011 - Helmholtz-Zentrum für ...
Research Report 2010 2011 - Helmholtz-Zentrum für ...
Research Report 2010 2011 - Helmholtz-Zentrum für ...
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SCIENTIFIC REPORTS | Publications<br />
157<br />
• Pati,A., Sikorski,J., Gronow,S., Munk,C., Lapidus,A., Copeland,A.,<br />
Glavina Del,T.T., Nolan,M., Lucas,S., Chen,F., Tice,H., Cheng,J.F.,<br />
Han,C., Detter,J.C., Bruce,D., Tapia,R., Goodwin,L., Pitluck,S.,<br />
Liolios,K., Ivanova,N., Mavromatis,K., Mikhailova,N., Chen,A.,<br />
Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,<br />
Spring,S., Rohde,M., Göker,M., Bristow,J., Eisen,J.A., Markowitz,V.,<br />
Hugenholtz,P., Kyrpides,N.C., & Klenk,H.P. (<strong>2010</strong>) Complete genome<br />
sequence of Brachyspira murdochii type strain (56-150). Standards in<br />
Genomic Sciences 2, 260-269.<br />
• Pati,A., Labutti,K., Pukall,R., Nolan,M., Glavina Del,R.T., Tice,H.,<br />
Cheng,J.F., Lucas,S., Chen,F., Copeland,A., Ivanova,N., Mavromatis,K.,<br />
Mikhailova,N., Pitluck,S., Bruce,D., Goodwin,L., Land,M., Hauser,L.,<br />
Chang,Y.J., Jeffries,C.D., Chen,A., Palaniappan,K., Chain,P., Brettin,T.,<br />
Sikorski,J., Rohde,M., Göker,M., Bristow,J., Eisen,J.A., Markowitz,V.,<br />
Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., & Lapidus,A. (<strong>2010</strong>) Complete<br />
genome sequence of Sphaerobacter thermophilus type strain (S<br />
6022). Standards in Genomic Sciences 2, 49-56.<br />
• Pitluck,S., Yasawong,M., Munk,C., Nolan,M., Lapidus,A., Lucas,S.,<br />
Glavina Del,R.T., Tice,H., Cheng,J.F., Bruce,D., Detter,C., Tapia,R.,<br />
Han,C., Goodwin,L., Liolios,K., Ivanova,N., Mavromatis,K.,<br />
Mikhailova,N., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L.,<br />
Chang,Y.J., Jeffries,C.D., Rohde,M., Spring,S., Sikorski,J., Göker,M.,<br />
Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P.,<br />
Kyrpides,N.C., & Klenk,H.P. (<strong>2010</strong>) Complete genome sequence of<br />
Thermosediminibacter oceani type strain (JW/IW-1228P). Standards<br />
in Genomic Sciences 3, 108-116.<br />
• Pitluck,S., Yasawong,M., Held,B., Lapidus,A., Nolan,M.,<br />
Copeland,A., Lucas,S., Del Rio,T.G., Tice,H., Cheng,J.F., Chertkov,O.,<br />
Goodwin,L., Tapia,R., Han,C., Liolios,K., Ivanova,N., Mavromatis,K.,<br />
Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Land,M.,<br />
Hauser,L., Chang,Y.J., Jeffries,C.D., Pukall,R., Spring,S., Rohde,M.,<br />
Sikorski,J., Göker,M., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V.,<br />
Hugenholtz,P., Kyrpides,N.C., & Klenk,H.P. (<strong>2010</strong>) Non-contiguous<br />
finished genome sequence of Aminomonas paucivorans type strain<br />
(GLU-3). Standards in Genomic Sciences 3, 285-293.<br />
• Pukall,R., Lapidus,A., Glavina Del,R.T., Copeland,A., Tice,H.,<br />
Cheng,J.F., Lucas,S., Chen,F., Nolan,M., Labutti,K., Pati,A., Ivanova,N.,<br />
Mavromatis,K., Mikhailova,N., Pitluck,S., Bruce,D., Goodwin,L.,<br />
Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Chen,A., Palaniappan,K.,<br />
Chain,P., Rohde,M., Göker,M., Bristow,J., Eisen,J.A., Markowitz,V.,<br />
Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., & Brettin,T. (<strong>2010</strong>) Complete<br />
genome sequence of Kribbella flavida type strain (IFO 14399).<br />
Standards in Genomic Sciences 2, 186-193.<br />
• Pukall,R., Lapidus,A., Glavina Del,R.T., Copeland,A., Tice,H.,<br />
Cheng,J.F., Lucas,S., Chen,F., Nolan,M., Bruce,D., Goodwin,L.,<br />
Pitluck,S., Mavromatis,K., Ivanova,N., Ovchinnikova,G., Pati,A.,<br />
Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,<br />
Chain,P., Meincke,L., Sims,D., Brettin,T., Detter,J.C., Rohde,M.,<br />
Göker,M., Bristow,J., Eisen,J.A., Markowitz,V., Kyrpides,N.C.,<br />
Klenk,H.P., & Hugenholtz,P. (<strong>2010</strong>) Complete genome sequence of<br />
Conexibacter woesei type strain (ID131577). Standards in Genomic<br />
Sciences 2, 212-219.<br />
• Reißmann,S., Friedrichs,C., Rajkumari,R., Itzek,A., Fulde,M.,<br />
Rodloff,A.C., Brahmadathan,K.N., Chhatwal,G.S.*., & Nitsche-<br />
Schmitz,D.P. (<strong>2010</strong>) Contribution of Streptococcus anginosus to<br />
infections caused by groups C and G Streptococci, Southern India.<br />
Emerging Infectious Diseases 16, 656-663.<br />
• Rohde,M., Graham,R.M., Branitzki-Heinemann,K., Borchers,P.,<br />
Preuss,C., Schleicher,I., Zahner,D., Talay,S.R., Fulde,M., Dinkla,K., &<br />
Chhatwal,G.S.*. (<strong>2010</strong>) Differences in the aromatic domain of homologous<br />
streptococcal fibronectin-binding proteins trigger different<br />
cell invasion mechanisms and survival rates. Cellular Microbiology<br />
13, 450-468.<br />
• Saunders,E., Tindall,B.J., Fahnrich,R., Lapidus,A., Copeland,A., Del<br />
Rio,T.G., Lucas,S., Chen,F., Tice,H., Cheng,J.F., Han,C., Detter,J.C.,<br />
Bruce,D., Goodwin,L., Chain,P., Pitluck,S., Pati,A., Ivanova,N.,<br />
Mavromatis,K., Chen,A., Palaniappan,K., Land,M., Hauser,L.,<br />
Chang,Y.J., Jeffries,C.D., Brettin,T., Rohde,M., Göker,M., Bristow,J.,<br />
Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P., & Kyrpides,N.C.<br />
(<strong>2010</strong>) Complete genome sequence of Haloterrigena turkmenica type<br />
strain (4k). Standards in Genomic Sciences 2, 107-116.<br />
• Sikorski,J., Chertkov,O., Lapidus,A., Nolan,M., Lucas,S., Del Rio,T.G.,<br />
Tice,H., Cheng,J.F., Tapia,R., Han,C., Goodwin,L., Pitluck,S.,<br />
Liolios,K., Ivanova,N., Mavromatis,K., Mikhailova,N., Pati,A.,<br />
Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,<br />
Brambilla,E., Yasawong,M., Rohde,M., Pukall,R., Spring,S., Göker,M.,<br />
Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P.,<br />
Kyrpides,N.C., & Klenk,H.P. (<strong>2010</strong>) Complete genome sequence of<br />
Ilyobacter polytropus type strain (CuHbu1). Standards in Genomic<br />
Sciences 3, 304-314.<br />
• Sikorski,J., Lapidus,A., Chertkov,O., Lucas,S., Copeland,A., Glavina<br />
Del,R.T., Nolan,M., Tice,H., Cheng,J.F., Han,C., Brambilla,E.,<br />
Pitluck,S., Liolios,K., Ivanova,N., Mavromatis,K., Mikhailova,N.,<br />
Pati,A., Bruce,D., Detter,C., Tapia,R., Goodwin,L., Chen,A.,<br />
Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,<br />
Rohde,M., Göker,M., Spring,S., Woyke,T., Bristow,J., Eisen,J.A.,<br />
Markowitz,V., Hugenholtz,P., Kyrpides,N.C., & Klenk,H.P. (<strong>2010</strong>)<br />
Complete genome sequence of Acetohalobium arabaticum type strain<br />
(Z-7288). Standards in Genomic Sciences 3, 57-65.<br />
• Sikorski,J., Lapidus,A., Copeland,A., Glavina Del,R.T., Nolan,M.,<br />
Lucas,S., Chen,F., Tice,H., Cheng,J.F., Saunders,E., Bruce,D.,<br />
Goodwin,L., Pitluck,S., Ovchinnikova,G., Pati,A., Ivanova,N.,<br />
Mavromatis,K., Chen,A., Palaniappan,K., Chain,P., Land,M.,<br />
Hauser,L., Chang,Y.J., Jeffries,C.D., Brettin,T., Detter,J.C., Han,C.,<br />
Rohde,M., Lang,E., Spring,S., Göker,M., Bristow,J., Eisen,J.A.,<br />
Markowitz,V., Hugenholtz,P., Kyrpides,N.C., & Klenk,H.P. (<strong>2010</strong>) Complete<br />
genome sequence of Sulfurospirillum deleyianum type strain<br />
(5175). Standards in Genomic Sciences 2, 149-157.<br />
• Sikorski,J., Munk,C., Lapidus,A., Ngatchou Djao,O.D., Lucas,S.,<br />
Glavina Del,R.T., Nolan,M., Tice,H., Han,C., Cheng,J.F., Tapia,R.,<br />
Goodwin,L., Pitluck,S., Liolios,K., Ivanova,N., Mavromatis,K.,<br />
Mikhailova,N., Pati,A., Sims,D., Meincke,L., Brettin,T., Detter,J.C.,<br />
Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,<br />
Rohde,M., Lang,E., Spring,S., Göker,M., Woyke,T., Bristow,J.,<br />
Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., & Klenk,H.P.<br />
(<strong>2010</strong>) Complete genome sequence of Sulfurimonas autotrophica type<br />
strain (OK10). Standards in Genomic Sciences 3, 194-202.<br />
• Sikorski,J., Tindall,B.J., Lowry,S., Lucas,S., Nolan,M., Copeland,A.,<br />
Glavina Del,R.T., Tice,H., Cheng,J.F., Han,C., Pitluck,S., Liolios,K.,<br />
Ivanova,N., Mavromatis,K., Mikhailova,N., Pati,A., Goodwin,L.,<br />
Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,<br />
Rohde,M., Göker,M., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V.,<br />
Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., & Lapidus,A. (<strong>2010</strong>) Complete<br />
genome sequence of Meiothermus silvanus type strain (VI-R2).<br />
Standards in Genomic Sciences 3, 37-46.<br />
• Sikorski,J., Lapidus,A., Copeland,A., Misra,M., Glavina Del,R.T.,<br />
Nolan,M., Lucas,S., Chen,F., Tice,H., Cheng,J.F., Jando,M.,<br />
Schneider,S., Bruce,D., Goodwin,L., Pitluck,S., Liolios,K.,<br />
Mikhailova,N., Pati,A., Ivanova,N., Mavromatis,K., Chen,A.,<br />
Palaniappan,K., Chertkov,O., Land,M., Hauser,L., Chang,Y.J.,<br />
Jeffries,C.D., Brettin,T., Detter,J.C., Han,C., Rohde,M., Göker,M.,<br />
Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., &<br />
Klenk,H.P. (<strong>2010</strong>) Complete genome sequence of Segniliparus rotundus<br />
type strain (CDC 1076). Standards in Genomic Sciences 2, 203-211.<br />
• Spring,S., Nolan,M., Lapidus,A., Glavina Del,R.T., Copeland,A.,<br />
Tice,H., Cheng,J.F., Lucas,S., Land,M., Chen,F., Bruce,D., Goodwin,L.,<br />
Pitluck,S., Ivanova,N., Mavromatis,K., Mikhailova,N., Pati,A.,<br />
Chen,A., Palaniappan,K., Hauser,L., Chang,Y.J., Jeffries,C.D.,<br />
Munk,C., Kiss,H., Chain,P., Han,C., Brettin,T., Detter,J.C.,<br />
Schuler,E., Göker,M., Rohde,M., Bristow,J., Eisen,J.A., Markowitz,V.,<br />
Hugenholtz,P., Kyrpides,N.C., & Klenk,H.P. (<strong>2010</strong>) Complete genome<br />
sequence of Desulfohalobium retbaense type strain (HR(100)). Standards<br />
in Genomic Siences 2, 38-48.<br />
• Spring,S., Scheuner,C., Lapidus,A., Lucas,S., Glavina Del,R.T.,<br />
Tice,H., Copeland,A., Cheng,J.F., Chen,F., Nolan,M., Saunders,E.,<br />
Pitluck,S., Liolios,K., Ivanova,N., Mavromatis,K., Lykidis,A., Pati,A.,<br />
Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,<br />
Goodwin,L., Detter,J.C., Brettin,T., Rohde,M., Göker,M., Woyke,T.,<br />
Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C.,<br />
& Klenk,H.P. (<strong>2010</strong>) The Genome Sequence of Methanohalophilus<br />
mahii SLP Reveals Differences in the Energy Metabolism among<br />
Members of the Methanosarcinaceae Inhabiting Freshwater and<br />
Saline Environments. Archaea <strong>2010</strong>, 690737.