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Nucleotide Analogs - Jena Bioscience

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JBS Methylation Kit<br />

Surface engineering of biological macromolecules provides a powerful<br />

technique to deal with proteins which are reluctant to crystallize or which<br />

yield poorly diffracting crystals only. The JBS Methylation Kit offers a<br />

straightforward tool for the selective methylation of lysine residues.<br />

The method does not require laborious cloning/expression/purifi cation<br />

but chemically substitutes the protons of the amino group of lysine<br />

residues with methyl groups. The result is a surface-engineered protein<br />

within 24 hours, ready for crystallization.<br />

Each JBScreen Methylation Kit contains all necessary reagents for<br />

six methylation experiments. All components provided are ready to use,<br />

so just follow the manual step-by-step. No background in chemistry<br />

necessary.<br />

JBScreen Single Stocks<br />

Single stock solutions of the JBScreen components, i.e. buffers, salts<br />

and precipitants, are ideal for the optimization of your crystallization<br />

conditions. Using the same chemicals as utilized in the JBScreens<br />

ensures higher reproducibility of your experiments. JBScreen Single<br />

Stocks are ready for use: the concentration is adjusted and they are<br />

sterile fi ltered.<br />

Buffer Solutions<br />

Cat. No. Amount Price (€)<br />

HEPES Sodium Salt pH 7.5, 1 M CS-604 50 ml 30,--<br />

Imidazole HCl pH 8.0, 1 M CS-605 50 ml 25,--<br />

MES Sodium Salt pH 6.5, 1 M CS-603 50 ml 40,--<br />

Sodium Acetate pH 4.6, 1 M CS-601 50 ml 15,--<br />

Sodium Citrate pH 5.6, 1 M CS-602 50 ml 15,--<br />

Tris HCl pH 8.5, 1 M CS-606 50 ml 15,--<br />

Precipitants<br />

Ball-and-Stick<br />

representation of a<br />

methylated lysine residue.<br />

Cat. No. Amount Price (€)<br />

MPD, 100% (v/v) CS-628 50 ml 15,--<br />

2-Propanol, 100% (v/v) CS-630 50 ml 15,--<br />

Glycerol (anhydrous), 100% (v/v) CS-629 50 ml 15,--<br />

Polyethylene Glycol 400, 100% (w/v) CS-619 50 ml 15,--<br />

Polyethylene Glycol 1000, 50% (w/v) CS-620 50 ml 15,--<br />

Polyethylene Glycol 3350, 50% (w/v) CS-621 50 ml 15,--<br />

Polyethylene Glycol 4000, 50% (w/v) CS-622 50 ml 15,--<br />

Polyethylene Glycol 6000, 50% (w/v) CS-623 50 ml 15,--<br />

Polyethylene Glycol 8000, 50% (w/v) CS-624 50 ml 15,--<br />

Polyethylene Glycol 550 MME, 50% (w/v) CS-625 50 ml 15,--<br />

Polyethylene Glycol 2000 MME, 50% (w/v) CS-626 50 ml 15,--<br />

Polyethylene Glycol 5000 MME, 50% (w/v) CS-627 50 ml 15,--<br />

References:<br />

Kobayashi et al. (2003) Refi ned structure and functional implications of trehalose synthase from<br />

Sulfolobus acidocaldarius. J. Applied Glycoscience 50:1.<br />

Kurinov et al. (2003) High resolution X-ray structure of potent anti-HIV pokeweed antiviral protein-III.<br />

Biochem. Pharmacol. 65:1709.<br />

Kurinov et al. (2000) X-ray crystallographic analysis of pokeweed antiviral protein-II after reductive<br />

methylation of lysine residues. Biochem. Biophys. Res. Comm. 275:549.<br />

Kobayashi et al. (1999) Crystallization and improvement of crystal quality for X-ray diffraction<br />

of maltooligosyl trehalose synthase by reductive methylation of lysine residues. Acta Cryst. D<br />

55:931.<br />

Rayment (1997) Reductive alkylation of lysine residues to alter crystallization properties of proteins.<br />

Methods in Enzymology 276 (12):171.<br />

Rypniewski et al. (1993) Structural consequences of reductive methylation of lysine residues in<br />

hen egg white lysozyme: an X-ray analysis at 1.8-A resolution. Biochemistry 21:9851.<br />

Rayment et al. (1993) Three-dimensional structure of myosin subfragment-1: A molecular motor.<br />

Science 261:50.<br />

Cat. No. Amount Price (€)<br />

JBS Methylation Kit CS-510 1 Kit 150,--<br />

Salts<br />

Crystallization Optimization<br />

Further recommended reading:<br />

Derewenda (2004) Rational protein crystallization by mutational surface engineering. Structure<br />

12:529.<br />

Cat. No. Amount Price (€)<br />

Ammonium Acetate, 8.0 M CS-607 50 ml 20,--<br />

Ammonium Sulfate, 3.5 M CS-608 50 ml 15,--<br />

Lithium Chloride, 10.0 M CS-609 50 ml 20,--<br />

Lithium Sulfate, 2.0 M CS-610 50 ml 20,--<br />

Magnesium Chloride, 2.0 M CS-611 50 ml 20,--<br />

Magnesium Sulfate, 2.5 M CS-612 50 ml 15,--<br />

Potassium Chloride, 4.0 M CS-613 50 ml 20,--<br />

Sodium Acetate, 3.0 M CS-614 50 ml 15,--<br />

Sodium Chloride, 5.0 M CS-615 50 ml 15,tri-Sodium<br />

Citrate, 1.6 M CS-616 50 ml 15,--<br />

Sodium Malonate, 3.4 M CS-617 50 ml 25,--<br />

Zinc Acetate, 1.0 M CS-618 50 ml 20,--<br />

Macromolecular Crystallography<br />

109

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