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Molecular Characterization and Gene Expression Profiling ... - CUSAT

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Chapter 2<br />

Tiger shrimp (P. monodon) is one of the most important cultivated<br />

penaeid shrimps in the world. However, the shrimp aquaculture industry is<br />

suffering from diseases linked to infection by viral pathogens, which cause a<br />

drastic decrease in shrimp production, resulting in huge economic losses. To<br />

overcome this problem, studies should be focused on developing strategies<br />

of controlling viral diseases to ensure long-term survival of shrimp<br />

aquaculture. The increased prevalence of disease outbreak is contributing to<br />

the rising costs of aquaculture of shrimp <strong>and</strong> marine fishes. Furthermore,<br />

bacterial resistance arising from over usage of conventional antibiotics<br />

against infection by pathogens in aquaculture, agriculture, <strong>and</strong> human<br />

medicine is becoming widespread, <strong>and</strong> has led to a corresponding increase<br />

in the number of attempts to find effective replacements. AMPs are a largely<br />

unexplored group of antimicrobial compounds that are gaining prominence<br />

as potential therapeutic agents (Hancock <strong>and</strong> Patrzykat, 2002).<br />

In the present study, seven AMP genes viz., ALF-1 ALF-2, crustin-1,<br />

crustin-2, crustin-3, penaeidin-3 <strong>and</strong> penaeidin-5 were successfully isolated<br />

from the haemocytes of P. monodon.<br />

ALFs are small basic proteins of approximately 100 amino acids that<br />

were initially characterized from the haemolymph of distantly related<br />

arthropods, the horseshoe crabs T. tridentatus (Aketagawa et al., 1986) <strong>and</strong> L.<br />

polyphemus (Muta et al., 1987). Thereafter, several ALF homologs have been<br />

identified from P. monodon (Supungul et al., 2004) <strong>and</strong> many other shrimp<br />

species including L. setiferus (Gross et al., 2001), F. chinensis (ALFFc) (Liu et<br />

al., 2005), M. japonicas (M-ALF) (Nagoshi et al., 2006), P. leniusculus (Liu et al.,<br />

2006), L. vannamei, L. styrirostris lobster <strong>and</strong> mud crab (Imjongjirak et al.,<br />

2007). The growing number of relatively conserved ALF genes identified<br />

with apparently conserved functions being characterized across taxa seems<br />

to indicate the likely importance of ALF in shrimps besides the AMPs in the<br />

penaeidin family (Gueguen et al., 2006).<br />

<strong>Molecular</strong> <strong>Characterization</strong> <strong>and</strong> <strong>Gene</strong> <strong>Expression</strong> <strong>Profiling</strong> of Antimicrobial Peptides in Penaeid Shrimps<br />

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