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Protocols and Applications Guide (US Letter Size) - Promega

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||||||||||| 11Protein Purification <strong>and</strong> Analysis<br />

Phase 1<br />

In vitro Prey Protein Synthesis<br />

(TNT ® T7 System)<br />

P P P<br />

P<br />

M GST<br />

GST<br />

Wash<br />

Elute<br />

+<br />

prey protein<br />

detected<br />

P<br />

P<br />

Phase 3<br />

Prey Capture<br />

Phase 2<br />

Immobilization of Bait (GST-fusion)<br />

Protein onto MagneGST Particles<br />

Experimental<br />

Control<br />

(GST-Fusion) (GST)<br />

M GST<br />

M GST<br />

Wash<br />

MElute<br />

GST<br />

Bait<br />

P<br />

P<br />

Bacterial<br />

Cells<br />

4402MA12_3A<br />

Lysis<br />

Binding<br />

M GST<br />

Figure 11.9. Schematic diagram of the MagneGST Pull-Down System protocol. P = prey protein, M = MagneGST Particle.<br />

2. Add 200µl of MagneGST Cell Lysis Reagent to each<br />

fresh or frozen cell pellet. Resuspend the cell pellet at<br />

room temperature (20–25°C) by pipetting or gentle<br />

mixing.<br />

3. Add 2µl of RQ1 RNase-Free DNase.<br />

Note: Addition of DNase reduces viscosity <strong>and</strong> can<br />

increase the purity of GST-fusion proteins. Up to 5µl<br />

of RQ1 RNase-Free DNase can be added to reduce<br />

viscosity. The DNase can be omitted, if desired.<br />

4. Incubate the cell suspension at room temperature for<br />

20–30 minutes on a rotating platform or shaker. During<br />

this incubation, begin the particle equilibration<br />

procedure.<br />

Equilibrate Particles<br />

1. Thoroughly resuspend the MagneGST Particles by<br />

inverting the bottle several times to obtain a uniform<br />

suspension.<br />

<strong>Protocols</strong> & <strong>Applications</strong> <strong>Guide</strong><br />

www.promega.com<br />

rev. 3/09<br />

2. Pipet 20µl of MagneGST Particles into a 1.5ml tube.<br />

3. Place the tube in the magnetic st<strong>and</strong>, <strong>and</strong> allow the<br />

MagneGST Particles to be captured by the magnet.<br />

Magnetic capture will typically occur within a few<br />

seconds.<br />

4. Carefully remove <strong>and</strong> discard the supernatant.<br />

5. Remove the tube from the magnetic st<strong>and</strong>. Add 250µl<br />

of MagneGST Binding/Wash Buffer to the particles,<br />

<strong>and</strong> resuspend by pipetting or inverting.<br />

6. Repeat Steps 3–5 two more times for a total of three<br />

washes.<br />

Bind Protein<br />

1. After the final wash, resuspend the particles in 100µl<br />

of MagneGST Binding/Wash Buffer.<br />

Note: Adding up to 1% BSA may reduce nonspecific<br />

binding <strong>and</strong> potential problems with background.<br />

PROTOCOLS & APPLICATIONS GUIDE 11-17

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