13.03.2013 Views

Protocols and Applications Guide (US Letter Size) - Promega

Protocols and Applications Guide (US Letter Size) - Promega

Protocols and Applications Guide (US Letter Size) - Promega

SHOW MORE
SHOW LESS

Create successful ePaper yourself

Turn your PDF publications into a flip-book with our unique Google optimized e-Paper software.

||||| 5Protein Expression<br />

Coupled Systems, since the master mix contains all amino<br />

acids except methionine, <strong>and</strong> the labeling efficiency with<br />

other amino acids will be significantly reduced.<br />

Table 5.3. Recommended Concentrations of Alternative<br />

Radiolabeled Amino Acids.<br />

Final<br />

Concentration Volume<br />

Amino Acid<br />

in Reaction Required<br />

[3H]leucine<br />

(100–200Ci/mmol)<br />

0.5mCi/ml<br />

5µl<br />

[14C]leucine<br />

(300mCi/mmol)<br />

[35S]cysteine<br />

(1,200Ci/mmol)<br />

5µCi/ml<br />

0.3mCi/ml<br />

5µl<br />

5µl<br />

[35S] Methionine<br />

We recommend using a “translational grade”<br />

[35S]methionine such as PerkinElmer EasyTag<br />

L-[35S]methionine (PerkinElmer Cat.# NEG709A). We have<br />

obtained acceptable results using 1–4µl of [35S]methionine<br />

(1,200Ci/mmol at 10mCi/ml). Depending upon the<br />

translational efficiency of the experimental RNA/DNA <strong>and</strong><br />

number of methionines present in the protein, the amount<br />

of [35S]methionine can be adjusted to balance exposure<br />

time against label cost. When using <strong>and</strong> storing<br />

[35S]methionine, follow the manufacturer’s<br />

recommendations.<br />

Non-Radioactive Protein Labeling<br />

The Transcend Non-Radioactive Translation Detection<br />

Systems (Cat.# L5070 <strong>and</strong> L5080) <strong>and</strong> the FluoroTect<br />

GreenLys in vitro Translation Labeling System (Cat.# L5001)<br />

can be used with any of the TNT® Coupled or Quick<br />

Coupled Systems. These systems use a precharged lysine<br />

tRNA, which is incorporated into the translated protein.<br />

The Transcend System incorporates a biotinylated lysine,<br />

which can be detected by blotting <strong>and</strong> probing with<br />

streptavidin/AP or streptavidin HRP. The FluoroTect<br />

Reagent incorporates a fluorescently labeled lysine<br />

(BODIPY®), which can be detected directly in the gel.<br />

III. Eukaryotic Cell-Free Expression Systems<br />

The TNT® Coupled Reticulocyte Lysate Systems offer<br />

researchers an alternative for eukaryotic in vitro<br />

transcription <strong>and</strong> translation: a one-tube, coupled<br />

transcription/translation system. St<strong>and</strong>ard Rabbit<br />

Reticulocyte Lysate or Wheat Germ Extract translations<br />

(Pelham <strong>and</strong> Jackson, 1976) commonly use RNA<br />

synthesized in vitro (Krieg <strong>and</strong> Melton, 1984) from SP6, T3<br />

or T7 RNA polymerase promoters. The RNA is then used<br />

as a template for translation. The TNT® Systems bypass<br />

many of these steps by incorporating transcription directly<br />

in the translation mix.<br />

In most cases, the TNT® System reactions produce<br />

significantly more protein (two- to sixfold) in a 1- to 2-hour<br />

reaction than st<strong>and</strong>ard in vitro Rabbit Reticulocyte Lysate<br />

<strong>Protocols</strong> & <strong>Applications</strong> <strong>Guide</strong><br />

www.promega.com<br />

rev. 6/09<br />

or Wheat Germ Extract translations using RNA templates.<br />

In addition, TNT® Lysates also can be used with microsomal<br />

membranes to study processing events (see Section VII).<br />

A. TNT® SP6 High-Yield Protein Expression System<br />

The TNT® SP6 High-Yield Protein Expression System uses<br />

a high-activity wheat germ extract supplemented with SP6<br />

RNA polymerase <strong>and</strong> other components to express<br />

10–100µg/ml of soluble protein in a one-tube coupled<br />

transcription/translation format. The system produces<br />

substantially more protein than conventional wheat germ<br />

systems while maintaining the ease of use that cell-free <strong>and</strong><br />

coupled transcription <strong>and</strong> translation conditions afford.<br />

Following a two-hour incubation, the expressed protein<br />

can be used directly in downstream applications; no protein<br />

purification steps are necessary. For a detailed protocol<br />

<strong>and</strong> background information on this system, please see<br />

Technical Manual #TM282 (www.promega.com<br />

/tbs/tm282/tm282.html).<br />

B. TNT® T7 Insect Cell Extract Protein Expression System<br />

The TNT® T7 Insect Cell Extract Protein Expression System<br />

is a single-tube, coupled transcription/translation system<br />

for the cell-free expression of proteins. The extract is made<br />

from the commonly used Spodoptera frugiperda Sf21 cell line<br />

(Ezure et al. 2006) However, the extract contains no<br />

endogenous glycosylation machinery. All necessary<br />

components are present in the TNT® T7 ICE Master Mix<br />

(ICE = insect cell extract). Protein is expressed from genes<br />

cloned downstream of the T7 polymerase promoter. The<br />

best expression will be achieved using vectors that contain<br />

the baculovirus polyhedrin 5´ <strong>and</strong> 3´ untranslated region<br />

(Suzuki et al. 2006). Two vectors, the pF25A <strong>and</strong> pF25K ICE<br />

T7 Flexi® Vectors (Cat.# L1061 <strong>and</strong> L1081), have been<br />

designed specifically to produce optimal protein yields in<br />

this system. For a detailed protocol <strong>and</strong> background<br />

information on this system, please see Technical Manual<br />

#TM305 (www.promega.com/tbs/tm305/tm305.html).<br />

The pF25A <strong>and</strong> pF25K ICE T7 Flexi® Vectors are compatible<br />

with the Flexi® Cloning System (Cat.# C8640), which allows<br />

easy transfer of sequences to <strong>and</strong> from additional Flexi®<br />

Vectors. Additional Flexi® Vectors are available for use<br />

with other protein expression systems. For a detailed<br />

protocol <strong>and</strong> background information on this system, please<br />

see Technical Manual #TM254 (www.promega.com<br />

/tbs/tm254/tm254.html).<br />

C. TNT® Coupled Wheat Germ Extract Systems—Coupled<br />

Transcription/Translation<br />

The TNT® Wheat Germ Extract Systems are available in<br />

five configurations for transcription <strong>and</strong> translation of genes<br />

cloned downstream from the SP6, T3 or T7 RNA<br />

polymerase promoter. With these systems, a 50µl reaction<br />

is programmed with 0.2–2µg of template <strong>and</strong> incubated<br />

for 1.5 hours at 30°C. For a detailed protocol <strong>and</strong><br />

background information about this system, please see<br />

Technical Bulletin #TB165 (www.promega.com<br />

/tbs/tb165/tb165.html).<br />

PROTOCOLS & APPLICATIONS GUIDE 5-5

Hooray! Your file is uploaded and ready to be published.

Saved successfully!

Ooh no, something went wrong!