Protocols and Applications Guide (US Letter Size) - Promega
Protocols and Applications Guide (US Letter Size) - Promega
Protocols and Applications Guide (US Letter Size) - Promega
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||||| 5Protein Expression<br />
Coupled Systems, since the master mix contains all amino<br />
acids except methionine, <strong>and</strong> the labeling efficiency with<br />
other amino acids will be significantly reduced.<br />
Table 5.3. Recommended Concentrations of Alternative<br />
Radiolabeled Amino Acids.<br />
Final<br />
Concentration Volume<br />
Amino Acid<br />
in Reaction Required<br />
[3H]leucine<br />
(100–200Ci/mmol)<br />
0.5mCi/ml<br />
5µl<br />
[14C]leucine<br />
(300mCi/mmol)<br />
[35S]cysteine<br />
(1,200Ci/mmol)<br />
5µCi/ml<br />
0.3mCi/ml<br />
5µl<br />
5µl<br />
[35S] Methionine<br />
We recommend using a “translational grade”<br />
[35S]methionine such as PerkinElmer EasyTag<br />
L-[35S]methionine (PerkinElmer Cat.# NEG709A). We have<br />
obtained acceptable results using 1–4µl of [35S]methionine<br />
(1,200Ci/mmol at 10mCi/ml). Depending upon the<br />
translational efficiency of the experimental RNA/DNA <strong>and</strong><br />
number of methionines present in the protein, the amount<br />
of [35S]methionine can be adjusted to balance exposure<br />
time against label cost. When using <strong>and</strong> storing<br />
[35S]methionine, follow the manufacturer’s<br />
recommendations.<br />
Non-Radioactive Protein Labeling<br />
The Transcend Non-Radioactive Translation Detection<br />
Systems (Cat.# L5070 <strong>and</strong> L5080) <strong>and</strong> the FluoroTect<br />
GreenLys in vitro Translation Labeling System (Cat.# L5001)<br />
can be used with any of the TNT® Coupled or Quick<br />
Coupled Systems. These systems use a precharged lysine<br />
tRNA, which is incorporated into the translated protein.<br />
The Transcend System incorporates a biotinylated lysine,<br />
which can be detected by blotting <strong>and</strong> probing with<br />
streptavidin/AP or streptavidin HRP. The FluoroTect<br />
Reagent incorporates a fluorescently labeled lysine<br />
(BODIPY®), which can be detected directly in the gel.<br />
III. Eukaryotic Cell-Free Expression Systems<br />
The TNT® Coupled Reticulocyte Lysate Systems offer<br />
researchers an alternative for eukaryotic in vitro<br />
transcription <strong>and</strong> translation: a one-tube, coupled<br />
transcription/translation system. St<strong>and</strong>ard Rabbit<br />
Reticulocyte Lysate or Wheat Germ Extract translations<br />
(Pelham <strong>and</strong> Jackson, 1976) commonly use RNA<br />
synthesized in vitro (Krieg <strong>and</strong> Melton, 1984) from SP6, T3<br />
or T7 RNA polymerase promoters. The RNA is then used<br />
as a template for translation. The TNT® Systems bypass<br />
many of these steps by incorporating transcription directly<br />
in the translation mix.<br />
In most cases, the TNT® System reactions produce<br />
significantly more protein (two- to sixfold) in a 1- to 2-hour<br />
reaction than st<strong>and</strong>ard in vitro Rabbit Reticulocyte Lysate<br />
<strong>Protocols</strong> & <strong>Applications</strong> <strong>Guide</strong><br />
www.promega.com<br />
rev. 6/09<br />
or Wheat Germ Extract translations using RNA templates.<br />
In addition, TNT® Lysates also can be used with microsomal<br />
membranes to study processing events (see Section VII).<br />
A. TNT® SP6 High-Yield Protein Expression System<br />
The TNT® SP6 High-Yield Protein Expression System uses<br />
a high-activity wheat germ extract supplemented with SP6<br />
RNA polymerase <strong>and</strong> other components to express<br />
10–100µg/ml of soluble protein in a one-tube coupled<br />
transcription/translation format. The system produces<br />
substantially more protein than conventional wheat germ<br />
systems while maintaining the ease of use that cell-free <strong>and</strong><br />
coupled transcription <strong>and</strong> translation conditions afford.<br />
Following a two-hour incubation, the expressed protein<br />
can be used directly in downstream applications; no protein<br />
purification steps are necessary. For a detailed protocol<br />
<strong>and</strong> background information on this system, please see<br />
Technical Manual #TM282 (www.promega.com<br />
/tbs/tm282/tm282.html).<br />
B. TNT® T7 Insect Cell Extract Protein Expression System<br />
The TNT® T7 Insect Cell Extract Protein Expression System<br />
is a single-tube, coupled transcription/translation system<br />
for the cell-free expression of proteins. The extract is made<br />
from the commonly used Spodoptera frugiperda Sf21 cell line<br />
(Ezure et al. 2006) However, the extract contains no<br />
endogenous glycosylation machinery. All necessary<br />
components are present in the TNT® T7 ICE Master Mix<br />
(ICE = insect cell extract). Protein is expressed from genes<br />
cloned downstream of the T7 polymerase promoter. The<br />
best expression will be achieved using vectors that contain<br />
the baculovirus polyhedrin 5´ <strong>and</strong> 3´ untranslated region<br />
(Suzuki et al. 2006). Two vectors, the pF25A <strong>and</strong> pF25K ICE<br />
T7 Flexi® Vectors (Cat.# L1061 <strong>and</strong> L1081), have been<br />
designed specifically to produce optimal protein yields in<br />
this system. For a detailed protocol <strong>and</strong> background<br />
information on this system, please see Technical Manual<br />
#TM305 (www.promega.com/tbs/tm305/tm305.html).<br />
The pF25A <strong>and</strong> pF25K ICE T7 Flexi® Vectors are compatible<br />
with the Flexi® Cloning System (Cat.# C8640), which allows<br />
easy transfer of sequences to <strong>and</strong> from additional Flexi®<br />
Vectors. Additional Flexi® Vectors are available for use<br />
with other protein expression systems. For a detailed<br />
protocol <strong>and</strong> background information on this system, please<br />
see Technical Manual #TM254 (www.promega.com<br />
/tbs/tm254/tm254.html).<br />
C. TNT® Coupled Wheat Germ Extract Systems—Coupled<br />
Transcription/Translation<br />
The TNT® Wheat Germ Extract Systems are available in<br />
five configurations for transcription <strong>and</strong> translation of genes<br />
cloned downstream from the SP6, T3 or T7 RNA<br />
polymerase promoter. With these systems, a 50µl reaction<br />
is programmed with 0.2–2µg of template <strong>and</strong> incubated<br />
for 1.5 hours at 30°C. For a detailed protocol <strong>and</strong><br />
background information about this system, please see<br />
Technical Bulletin #TB165 (www.promega.com<br />
/tbs/tb165/tb165.html).<br />
PROTOCOLS & APPLICATIONS GUIDE 5-5