Computational tools and Interoperability in Comparative ... - CBS

Publications and manuscripts
Publications included in this thesis are listed in the order they appear. All other articles
are sorted by publication date, descending. For papers with five and more citations this
number is indicated.
Paper I
Hallin PF, Binnewies TT, Ussery DW. The genome BLASTatlas - a GeneWiz extension
for visualization of whole-genome homology. Mol Biosyst 4:363-71 (2008).
Paper II
Binnewies TT, Motro Y, Hallin PF, Lund O, Dunn D. La T, Hampson DJ, Bellgard M,
Wassenaar TM, Ussery DW. Ten years of bacterial genome sequencing: comparative–
genomics–based discoveries. Funct Integr Genomics 6:165-85 (2006) - 56 citations.
Paper III
Reva ON, Hallin PF, Willenbrock H, Sicheritz-Ponten T, Tummler B, Ussery DW Global
features of the Alcanivorax borkumensis SK2 genome. Environ Microbiol 10:614-
25 (2008).
Paper IV
Vesth T, Hallin PF, Snipen L, Lagesen K, Wassenaar TM, Ussery DW. The origins of
Vibrio species. Microbial Ecology (2009) doi:10.1007/s00248-009-9596-7
Paper V
Wassenaar TM, Binnewies TT, Hallin PF, and Ussery DW Tools for comparison of
bacterial genomes. Book chapter, Microbiology of Hydrocarbons, Oils, Lipids, and
Derived Compounds, Springer-Verlag, Heidelberg, Germany, 2009.
ix