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In silico cloning - Bits.vib.be

In silico cloning - Bits.vib.be

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The Work<strong>be</strong>nch looks for the attP sites in the sequences of the entry vector that you select in this<br />

dialog so you should make sure that the attP sites are present in the entry vector that you choose.<br />

It only checks that valid attP sites are found - it does not check that they correspond to the attB<br />

sites of the selected fragments at this step. If the right combination of attB and attP sites is not<br />

found, no entry clones will <strong>be</strong> produced.<br />

The output is one entry clone per sequence selected. The attB and attP sites have <strong>be</strong>en used for<br />

the recombination, and the entry clone is now equipped with attL sites. The by-product of the BP<br />

recombination is not part of the output. Save the results since you will need them for the subsequent<br />

LR reaction.<br />

4.3 Create expression clones (LR)<br />

The final step in the Gateway <strong>cloning</strong> workflow is to recombine the entry clone into a destination<br />

vector to create an expression clone, the so-called LR reaction:<br />

Toolbox | Cloning and Restriction Sites | Gateway Cloning | Create Expression Clone<br />

This will open a dialog where you can select on or more entry clones. If you wish to perform separate<br />

LR reactions with multiple entry clones, you should run the Create Expression Clone in<br />

batch mode.

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