Maternal variation in Huichol and Mixtec populations from Mexico

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ACKNOWLEDGEMENT I would like express my sincere thanks to my supervisors Erika Tamm and Ene Metspalu for their professional guidance and encouraging. Special thanks to Erika Tamm for her guidance during this study and for her time. Also, thanks to all co-workers for a pleasant atmosphere at our workplace. 36
References Achilli, A, Perego, U. A., Bravi, C. M., Coble, M. D., Kong, Q. P., Woodward, S. R, Salas A, Torroni, A. and Bandelt, H. J. (2008). The phylogeny of the four pan-American MtDNA haplogroups: implications for evolutionary and disease studies. PLoS One 3(3):e1764. Adovasio, J. M. and Pedler D. R. 2004. Pre Clovis Sites and Their Implications for Human Occupation before the Last Glacial Maximum, p. 139–158. In Entering Northeast Asia and Beringia before the Last Glacial Maximum edited by David B. Madsen. University of Utah Press, Salt Lake City, Utah. Alberts, B., Bray, D., Lewis, J., Raff, M., Roberts, K. and Watson, J. D. 1989. Molecular Biology of the Cell, 2nd ed., p. 341-404, Garland Publishing, New York, London. Anderson, S., Bankier, A. T., Barrell, B. G., de Bruijn, M. H. L., Coulson, A. R., Drouin, J., Eperon, I. C., Nierlich, D. P., Roe, B. A., Sanger, F., Schreier, P. H., Smith, A. J., Staden, R. and Young, I. G. (1981). Sequence and organization of the human mitochondrial genome. Nature 290: 457–465. Andrews, R. M., Kubacka, I., Chinnery, P. F, Lightowlers, R. N., Turnbull, D. M. and Howell, N. (1999). Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA. Nature Genet. 23: 147. Aquadro, C. F. and Greenberg, B. D. (1983). Human mitochondrial DNA variation and evolution: analysis of nucleotide sequences from seven individuals. Genetics 103: 287-312. Avise, J. C, Arnold, J., Ball, R. M., Berminghatm, E., Lamb, E., Neigel, J. E., Reeb, C. A. and Saunders, N. C. (1987). Intraspecific phylogeography: the mitochondrial DNA bridge between population genetics and systematics. Annu. Rev. EcoI. Syst. 18: 489-522. Bogenhagen, D. and Clayton, D. A. (1974). The number of mitochondrial deoxyribonucleic acid genomes in mouse l and human HeLa cells. J. Biol. Chem. 249: 7991–7995. Bonatto, S. L. and Salzano, F. M. (1997). Diversity and age of the four major mtDNA haplogroups, and their implications for the peopling of the New World. Am J Hum Genet 61: 1413–1423 37
Page 1 and 2: TARTU UNIVERSITY FACULTY OF SCIENCE
Page 3 and 4: ABBREVIATIONS bp - base pair D-loop
Page 5 and 6: 1. LITERATURE OVERVIEW 1.1 Mitochon
Page 7 and 8: One of the reasons may be, that ped
Page 9 and 10: Figure 2. Diagnostic markers of Nat
Page 11 and 12: According to it, only one small gro
Page 13 and 14: their way down to the South America
Page 15 and 16: 2. EXPERIMENTAL STUDY 2.1 Aims of t
Page 17 and 18: To determine possible contamination
Page 19 and 20: * let dry at 37ºC for 5 min *add 1
Page 21 and 22: 2.3 RESULTS AND DISCUSSION 2.3.1 Ph
Page 23 and 24: that populations have gone through
Page 25 and 26: Figure 5. Haplogroup A haplotype ne
Page 27 and 28: Figure 7. Haplogroup C haplotype ne
Page 29 and 30: 2.3.2 C4c haplogroup One Huichol in
Page 31 and 32: N 12705s 16223 R 73 11719s R0 14766
Page 33 and 34: CONCLUSIONS Mitochondrial DNA has b
Page 35: mitokondriaalne DNA. Huitšoli proo
Page 39 and 40: Forster, P., Torroni, A., Renfrew,
Page 41 and 42: Loogvali, E. L., Kivisild, T., Marg
Page 43 and 44: Sandoval, K., Buentello-Malo, L., P
Page 45 and 46: SUPPLEMENTARY MATERIALS Tabel 1.1.
Page 47 and 48: Table 4.Data used for haplogroups f

Maternal variation in Huichol and Mixtec populations from Mexico

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