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2011–2012 UNIVERSITY CATALOG - Florida Institute of Technology

2011–2012 UNIVERSITY CATALOG - Florida Institute of Technology

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BIO 4411 CONSERVATION GENETICS (4 credits). Introduces conservation<br />

genetics. Focuses on population genetic theory and emphasizes molecular methods for<br />

examining population differentiation, genetic diversity, the evolution <strong>of</strong> small populations,<br />

and the management <strong>of</strong> threatened populations. Lab includes experimental<br />

design, data collection and analysis. Prerequisites: BIO 2110.<br />

BIO 4420 PRE-COLUMBIAN ECOSYSTEMS (1 credit). Investigates through<br />

ecology the extent to which pre-Columbian occupants <strong>of</strong> the Americas influenced<br />

ecosystems. Includes archaeological, anthropological and ecological data that<br />

contributes to understanding the key debates about what is natural in the Americas.<br />

(Requirement: Junior standing.) Prerequisites: BIO 3410.<br />

BIO 4421 NEOTROPICAL ARCHEOECOLOGY (3 credits). Studies the impact<br />

<strong>of</strong> human activities on past and present ecology. Integrates regional archaeology with<br />

modern ecology to compare sites with and without past human impacts. Uses field<br />

techniques that include forest census in megadiverse environments, sediment coring<br />

and curation <strong>of</strong> specimens. Prerequisites: BIO 4420.<br />

BIO 4515 ECOLOGY OF CORAL REEFS (3 credits). Broadly examines coral<br />

reefs from reef geology and geomorphology to conservation and management,<br />

including the physical environment, coral and symbiosis, reproduction, demography,<br />

community dynamics, diversity and function, biogeography and evolution, and natural<br />

and anthropogenic disturbances. Prerequisites: BIO 3410, BIO 4410.<br />

BIO 4517 INTRODUCTION TO MODELING FOR ECOLOGY AND<br />

BIOLOGY (4 credits). Includes allometric principles, biological processes within<br />

organisms, population and metapopulation models, competition and symbiosis,<br />

predator-prey relations, community and diversity, and models in evolution, biogeography,<br />

ecosystems and conservation. Prerequisites: BIO 3410.<br />

BIO 4530 BIOLOGY OF FISHES (4 credits). Introduces the structure, evolution,<br />

behavior and ecology <strong>of</strong> freshwater and marine fishes. Labs examine the anatomy,<br />

physiology and ecology <strong>of</strong> fishes. Includes field collection trips to local marine and<br />

freshwater habitats. Prerequisites: BIO 3410.<br />

BIO 4550 COMPARATIVE VERTEBRATE ANATOMY (4 credits). Lectures<br />

and labs examine the comparative anatomy <strong>of</strong> higher animals. Emphasizes the evolutionary<br />

trends <strong>of</strong> the vertebrates. (Requirement: Junior standing.)<br />

BIO 4620 FISH AQUACULTURE AND MANAGEMENT (4 credits). Surveys<br />

in depth the culture methods <strong>of</strong> freshwater and saltwater fish species including an<br />

introduction to the theory and techniques necessary for managing wild fisheries<br />

stocks. Labs focus on fish culturing methodology and analysis <strong>of</strong> wild fish populations.<br />

Includes several field studies. Prerequisites: BIO 1020.<br />

BIO 4625 CRUSTACEAN AQUACULTURE (3 credits). Studies the basic biology,<br />

life history and culturing techniques <strong>of</strong> the major commercially important crustaceans.<br />

Labs culture selected decapod species. Prerequisites: BIO 3510.<br />

BIO 4641 BIOLOGY OF MARINE MAMMALS (3 credits). Studies the evolution,<br />

classification, ecology and general life history <strong>of</strong> marine mammals. Prerequisites:<br />

BIO 1020.<br />

BIO 4710 MARINE BIOLOGY (4 credits). Lectures and labs on the nature <strong>of</strong> life<br />

in the ocean and in coastal environments. Reviews taxonomic diversity, ecological<br />

roles and adaptations <strong>of</strong> the five kingdoms. Includes physiological mechanisms, locomotion<br />

and migrations, defenses against predation, sensory reception, productivity,<br />

feeding, reproduction and symbiosis. Prerequisites: BIO 3510.<br />

BIO 4720 MARINE ECOLOGY (4 credits). Covers the structure and function <strong>of</strong><br />

marine biotic systems from the organism (life histories) to community and ecosystem.<br />

(Requirement: Senior standing.) (Q) Prerequisites: BIO 2801, BIO 3410.<br />

BIO 4904 FIELD BIOLOGY AND EVOLUTION OF THE GALAPAGOS<br />

ISLANDS (3 credits). Field biology course in the Galapagos Islands. Emphasizes<br />

climate and evolution processes and patterns. Includes both terrestrial and marine<br />

investigations <strong>of</strong> the unique biota <strong>of</strong> the islands. A field fee is required. Prerequisites:<br />

BIO 3410.<br />

BIO 4990 BIOLOGY FORUM (1 credit). Critical analysis <strong>of</strong> primary literature and<br />

review articles in the biological sciences by oral presentation and small group discussion.<br />

(Requirement: Instructor approval.)<br />

BIO 4991 UNDERGRADUATE RESEARCH 1 (3 credits). Research experience<br />

under the direction and supervision <strong>of</strong> a member <strong>of</strong> the biological sciences faculty.<br />

(Requirement: Instructor approval.) (Q)<br />

BIO 4992 UNDERGRADUATE RESEARCH 2 (3 credits). Research experience<br />

under the direction and supervision <strong>of</strong> a member <strong>of</strong> the biological sciences faculty.<br />

(Requirement: Instructor approval.) (Q)<br />

BIO 4993 UNDERGRADUATE RESEARCH 3 (3 credits). Research experience<br />

under the direction and supervision <strong>of</strong> a member <strong>of</strong> the biological sciences faculty.<br />

(Requirement: Instructor approval.) (Q)<br />

222 <strong>Florida</strong> Tech<br />

BIO 5005 COMPARATIVE BIOLOGY OF INVERTEBRATES (3 credits).<br />

Introduces graduate students to the methods by which invertebrate metazoans perform<br />

life functions, as well as the similarity underlying these methods. Draws on the rich<br />

diversity <strong>of</strong> invertebrate body forms, and compares major and minor phyla.<br />

BIO 5010 ICHTHYOLOGY (4 credits). Provides graduate students a background in<br />

ichthyology and fish biology. The first part follows classical ichthyology by covering systematics<br />

and evolution <strong>of</strong> fishes. The second part focuses on biological and ecological<br />

adaptation <strong>of</strong> fishes to different environments.<br />

BIO 5012 PROTEIN BIOTECHNOLOGY (3 credits). Introduces the fundamentals<br />

in protein biotechnology in industrial, medical and agricultural applications.<br />

Includes expression <strong>of</strong> recombinant proteins and analysis, transgenic animal and<br />

transgenic plant for protein production, gene therapy and the current status <strong>of</strong> the<br />

protein biotechnology industry.<br />

BIO 5020 FIELD ECOLOGY 1 (3 credits). Field course identifies the plant<br />

communities characteristic <strong>of</strong> the southern Appalachian Mountains. Examines the<br />

factors responsible for the control and dynamics <strong>of</strong> these community types in the field.<br />

The field trip is conducted in the Great Smoky Mountains National Park. A field fee<br />

is required.<br />

BIO 5022 CORAL REEF ECOLOGY (3 credits). Two-week field examination in<br />

the Bahamas. Familiarizes students with patterns <strong>of</strong> abundance and distribution <strong>of</strong><br />

the common species <strong>of</strong> coral reef fishes. Emphasizes species identification and field<br />

methods <strong>of</strong> investigating reef fish ecology. A field fee is required.<br />

BIO 5025 ECOLOGY OF SALT MARSH AND MANGROVE (3 credits).<br />

Discusses the ecology <strong>of</strong> salt marsh and mangrove systems. Emphasizes how organisms<br />

adapt to the alternating inundation and exposed environment, and how physical<br />

and biological factors interact to determine the population and community structures.<br />

BIO 5028 DESIGN AND ANALYSIS OF ECOLOGICAL STUDIES (4 credits).<br />

Comprehensively reviews experimental and observational methods and analysis tools<br />

commonly encountered in ecology. Emphasizes the practical application <strong>of</strong> research<br />

designs to ecological problems and different fields <strong>of</strong> ecology.<br />

BIO 5030 CONSERVATION BIOLOGY (3 credits). Demonstrates the synthetic<br />

nature <strong>of</strong> conservation biology drawing from the disciplines <strong>of</strong> genetics, population<br />

biology, biogeography, ecology, wildlife management, human ecology and natural<br />

resource management. Illustrates conservation issues using case studies from a wide<br />

variety <strong>of</strong> global ecosystems.<br />

BIO 5031 CONSERVATION GENETICS (3 credits). Introduces conservation<br />

genetics. Focuses on population genetic theory and emphasizes molecular methods to<br />

identify evolutionarily significant units, assess genetic diversity, understand the evolution<br />

<strong>of</strong> small populations and manage threatened populations.<br />

BIO 5034 PALEOCLIMATOLOGY AND PALEOECOLOGY (3 credits).<br />

Discusses how and why climate has changed, and how those changes have influenced<br />

ecosystems. Also covers species migration, speciation, community change and biogeography.<br />

Provides tools to develop climatic and ecological histories.<br />

BIO 5045 REPRODUCTION AND RECRUITMENT OF MARINE FISHES<br />

(4 credits). Discusses the processes <strong>of</strong> reproduction and recruitment <strong>of</strong> marine fishery<br />

species. Topics range from the physiological and behavioral characteristics <strong>of</strong> reproduction,<br />

to the molecular events <strong>of</strong> fertilization, to the influences <strong>of</strong> oceanographic<br />

processes on larval and juvenile life stages.<br />

BIO 5047 ECOLOGICAL PHYSIOLOGY OF FISHES (3 credits). Addresses<br />

how the physiology <strong>of</strong> fishes is affected and regulated in response to environmental<br />

changes. Fishes inhabit a vast range <strong>of</strong> habitats that vary with respect to biotic and<br />

abiotic factors. Successful maintenance <strong>of</strong> populations in challenging environments<br />

requires responsive adjustments in physiology.<br />

BIO 5060 BIOLOGY AND ECOLOGY OF SEAGRASSES (3 credits). Lectures,<br />

discussions <strong>of</strong> recent literature, and independent or group lab study <strong>of</strong> the truly<br />

marine angiosperms. Covers the systematics, anatomy, physiology and reproduction <strong>of</strong><br />

seagrasses, along with autoecology and community ecology <strong>of</strong> tropical and temperate<br />

seagrass meadows.<br />

BIO 5065 NATURAL HISTORY OF THE INDIAN RIVER LAGOON<br />

(3 credits). Field examination <strong>of</strong> the flora, fauna and descriptive ecology <strong>of</strong> the<br />

Indian River system along the east coast <strong>of</strong> <strong>Florida</strong>. Emphasizes understanding<br />

natural history in relation to geologic history, biogeography, human society and<br />

recent problems in resource management.<br />

BIO 5075 MULTIVARIATE ANALYSIS IN BIOLOGY (3 credits). Teaches graduate<br />

students how to apply various multivariate techniques in analyzing biological data<br />

using a hands-on problem-solving approach. Includes principal component analysis,<br />

cluster analysis and discriminate function analysis.<br />

BIO 5080 MECHANISMS OF BIOLOGICAL CLOCKS (3 credits). Surveys the<br />

primary literature <strong>of</strong> processes underlying rhythmicity including neural, cellular and<br />

molecular mechanisms. Focuses on circadian rhythms in vertebrate and invertebrate<br />

animals.

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