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Welcome to the 31st IUBS General Assembly and Conference on ...

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genomes, <str<strong>on</strong>g>and</str<strong>on</strong>g> sequencing is underway for a majority of<br />

<str<strong>on</strong>g>the</str<strong>on</strong>g> remaining diploid species.<br />

It should be noted that <str<strong>on</strong>g>the</str<strong>on</strong>g> I‐OMAP project has a huge<br />

advantage over o<str<strong>on</strong>g>the</str<strong>on</strong>g>r next generati<strong>on</strong> genome<br />

sequencing projects (e.g. Drosophila 12 genomes) 15 in<br />

that physical maps are available for all AA genome<br />

species as well as representatives of all o<str<strong>on</strong>g>the</str<strong>on</strong>g>r 9 genome<br />

type. Such resources facilitate <str<strong>on</strong>g>the</str<strong>on</strong>g> assembly of more<br />

complete genome sequences versus <strong>on</strong>es that rely solely<br />

<strong>on</strong> next generati<strong>on</strong> short‐read sequence data <str<strong>on</strong>g>and</str<strong>on</strong>g><br />

assembly algorithms, <str<strong>on</strong>g>the</str<strong>on</strong>g> so called “gene space<br />

assemblies”.<br />

In additi<strong>on</strong> <str<strong>on</strong>g>to</str<strong>on</strong>g> an I‐OMAP status report, this lecture will<br />

discuss <str<strong>on</strong>g>the</str<strong>on</strong>g> analysis of <str<strong>on</strong>g>the</str<strong>on</strong>g> O. glaberrima genome. O.<br />

glaberrima is 2 nd species of Oryza that was independently<br />

domesticated ~3,500 years ago in West Africa.<br />

1. Parker J. The 9 billi<strong>on</strong>‐people questi<strong>on</strong>. In: The Ec<strong>on</strong>omist. February<br />

24, 2011.<br />

2. Zhang Q, Li J, Xue Y, Han B, Deng XW (2008). Rice 2020: A Call For An<br />

Internati<strong>on</strong>al Coordinated Effort In Rice Functi<strong>on</strong>al Genomics.<br />

Molecular Plant, 1, 715–9.<br />

3. Zhang Q (2007). Strategies for developing Green Super Rice.<br />

Proceedings of <str<strong>on</strong>g>the</str<strong>on</strong>g> Nati<strong>on</strong>al Academy of Sciences, 104, 16402–9.<br />

4. Ammiraju JSS, S<strong>on</strong>g X, Luo Met al. (2010). The Oryza BAC Resource: a<br />

genus‐wide <str<strong>on</strong>g>and</str<strong>on</strong>g> genome scale <str<strong>on</strong>g>to</str<strong>on</strong>g>ol for exploring rice genome<br />

evoluti<strong>on</strong> <str<strong>on</strong>g>and</str<strong>on</strong>g> leveraging useful genetic diversity from wild relatives.<br />

Breeding Science, 60, 536–43.<br />

5. Ammiraju JS, Luo M, Goicoechea JL et al.(2006). The Oryza bacterial<br />

artificial chromosome library resource: c<strong>on</strong>structi<strong>on</strong> <str<strong>on</strong>g>and</str<strong>on</strong>g> analysis of<br />

12 deep‐coverage large‐insert BAC libraries that represent <str<strong>on</strong>g>the</str<strong>on</strong>g> 10<br />

genome types of <str<strong>on</strong>g>the</str<strong>on</strong>g> genus Oryza. Genome Res, 16, 140–7.<br />

6. Kim H, Hurwitz B, Yu Y et al. (2008). C<strong>on</strong>structi<strong>on</strong>, alignment <str<strong>on</strong>g>and</str<strong>on</strong>g><br />

analysis of 12 framework physical maps that represent <str<strong>on</strong>g>the</str<strong>on</strong>g> 10<br />

genome types of <str<strong>on</strong>g>the</str<strong>on</strong>g> genus Oryza. Genome Biol, 9, R45.<br />

7. Ammiraju JS, Zuccolo A, Yu Yet al. (2007). Evoluti<strong>on</strong>ary dynamics of<br />

an ancient retrotranspos<strong>on</strong> family provides insights in<str<strong>on</strong>g>to</str<strong>on</strong>g> evoluti<strong>on</strong> of<br />

genome size in <str<strong>on</strong>g>the</str<strong>on</strong>g> genus Oryza. Plant J, 52, 342–51.<br />

8. Piegu B, Guyot R, Picault Net al. (2006). Doubling genome size<br />

without polyploidizati<strong>on</strong>: dynamics of retrotranspositi<strong>on</strong>‐driven<br />

genomic expansi<strong>on</strong>s in Oryza australiensis, a wild relative of rice.<br />

Genome Res, 16, 1262–9.<br />

9. Hurwitz BL, Kudrna D, Yu Yet al. (2010). Rice structural variati<strong>on</strong>: a<br />

comparative analysis of structural variati<strong>on</strong> between rice <str<strong>on</strong>g>and</str<strong>on</strong>g> three<br />

of its closest relatives in <str<strong>on</strong>g>the</str<strong>on</strong>g> genus Oryza. Plant J, 63, 990–1003.<br />

10. Ammiraju JS, Fan C, Yu Y et al. (2010). Spatio‐temporal patterns of<br />

genome evoluti<strong>on</strong> in allotetraploid species of <str<strong>on</strong>g>the</str<strong>on</strong>g> genus Oryza. Plant J.<br />

2010 May 6.<br />

11. Ammiraju JS, Lu F, Sanyal A et al. (2008). Dynamic evoluti<strong>on</strong> of<br />

Oryza genomes is revealed by comparative genomic analysis of a<br />

genus‐wide vertical data set. Plant Cell, 20, 3191–209.<br />

12. Goff SA, Ricke D, Lan T‐Het al. (2002). A Draft Sequence of <str<strong>on</strong>g>the</str<strong>on</strong>g> Rice<br />

Genome (Oryza sativa L. ssp. jap<strong>on</strong>ica). Science, 296, 92–100.<br />

13. Yu J, Hu S, Wang J et al. (2002). A Draft Sequence of <str<strong>on</strong>g>the</str<strong>on</strong>g> Rice<br />

Genome (Oryza sativa L. ssp. indica). Science, 296, 79–92.<br />

14. Sequencing ProjectInternati<strong>on</strong>al Rice G: <str<strong>on</strong>g>the</str<strong>on</strong>g> map‐based sequence<br />

of <str<strong>on</strong>g>the</str<strong>on</strong>g> rice genome. Nature (2005). 436, 793–800.<br />

15. Evoluti<strong>on</strong> of genes <str<strong>on</strong>g>and</str<strong>on</strong>g> genomes <strong>on</strong> <str<strong>on</strong>g>the</str<strong>on</strong>g> Drosophila phylogeny.<br />

Nature (2007). 450, 203–18.<br />

The investigati<strong>on</strong> <strong>on</strong> genetic resources of<br />

domestic animals <str<strong>on</strong>g>and</str<strong>on</strong>g> poultry <str<strong>on</strong>g>and</str<strong>on</strong>g><br />

traditi<strong>on</strong>al knowledge in Miao <str<strong>on</strong>g>and</str<strong>on</strong>g> Tujia<br />

ethnic areas of western Hunan Province<br />

Junnian LI, Dayuan XUE, D<strong>on</strong>gmei YANG,<br />

Shuanglun TAO <str<strong>on</strong>g>and</str<strong>on</strong>g> Jing LIANG<br />

College of Life Resources <str<strong>on</strong>g>and</str<strong>on</strong>g> Envir<strong>on</strong>mental Science, 120<br />

Renmin Road, Jishou, Hunan 416000, China, College of Life<br />

<str<strong>on</strong>g>and</str<strong>on</strong>g> Envir<strong>on</strong>mental Science, Minzu University of China <str<strong>on</strong>g>and</str<strong>on</strong>g><br />

Nanjing Institute of Envir<strong>on</strong>mental Science, Ministry of<br />

Envir<strong>on</strong>mentalProtecti<strong>on</strong> of <str<strong>on</strong>g>the</str<strong>on</strong>g> People’s Republic of China.<br />

Email: junnianli@yahoo.com.cn; xuedayuan@hotmail.com<br />

In western Hunan, Miao <str<strong>on</strong>g>and</str<strong>on</strong>g> Tujia nati<strong>on</strong>alities have<br />

l<strong>on</strong>g coexisted with nature, <str<strong>on</strong>g>and</str<strong>on</strong>g> have accumulated a<br />

distinctive knowledge of traditi<strong>on</strong>. They domesticated<br />

<str<strong>on</strong>g>and</str<strong>on</strong>g> cultivated many local lives<str<strong>on</strong>g>to</str<strong>on</strong>g>ck <str<strong>on</strong>g>and</str<strong>on</strong>g> poultry species,<br />

such as Xiangxi black pig (endangered), Xiangxi yellow<br />

cattle, Ma<str<strong>on</strong>g>to</str<strong>on</strong>g>u goats, Wuxue goats, Zhijiang ducks<br />

(endangered) <str<strong>on</strong>g>and</str<strong>on</strong>g> Daomao chickens (endangered).<br />

However, since 1990, western Hunan has introduced<br />

many fine breeds from o<str<strong>on</strong>g>the</str<strong>on</strong>g>r locati<strong>on</strong>s in China <str<strong>on</strong>g>and</str<strong>on</strong>g><br />

abroad <str<strong>on</strong>g>to</str<strong>on</strong>g> improve <str<strong>on</strong>g>the</str<strong>on</strong>g> productivity of lives<str<strong>on</strong>g>to</str<strong>on</strong>g>ck by<br />

crossbreeding, resulting in a sharp decline, or even<br />

extincti<strong>on</strong>, of <str<strong>on</strong>g>the</str<strong>on</strong>g> local species of domesticated lives<str<strong>on</strong>g>to</str<strong>on</strong>g>ck<br />

<str<strong>on</strong>g>and</str<strong>on</strong>g> poultry. Fur<str<strong>on</strong>g>the</str<strong>on</strong>g>rmore, traditi<strong>on</strong>al knowledge of<br />

lives<str<strong>on</strong>g>to</str<strong>on</strong>g>ck <str<strong>on</strong>g>and</str<strong>on</strong>g> poultry breeding has been lost due <str<strong>on</strong>g>to</str<strong>on</strong>g> <str<strong>on</strong>g>the</str<strong>on</strong>g><br />

migrati<strong>on</strong> of young laborers for work <str<strong>on</strong>g>and</str<strong>on</strong>g> changes <str<strong>on</strong>g>to</str<strong>on</strong>g><br />

<str<strong>on</strong>g>the</str<strong>on</strong>g> lifestyles of <str<strong>on</strong>g>the</str<strong>on</strong>g> original inhabitants. This<br />

investigati<strong>on</strong> aimed <str<strong>on</strong>g>to</str<strong>on</strong>g> reveal <str<strong>on</strong>g>the</str<strong>on</strong>g> traditi<strong>on</strong>al knowledge<br />

of <str<strong>on</strong>g>and</str<strong>on</strong>g> <str<strong>on</strong>g>the</str<strong>on</strong>g> c<strong>on</strong>sciousness of sharing <str<strong>on</strong>g>the</str<strong>on</strong>g> benefits arising<br />

from <str<strong>on</strong>g>the</str<strong>on</strong>g> use of traditi<strong>on</strong>al knowledge of <str<strong>on</strong>g>the</str<strong>on</strong>g> lives<str<strong>on</strong>g>to</str<strong>on</strong>g>ck<br />

through pers<strong>on</strong>al interviews, group discussi<strong>on</strong>s <str<strong>on</strong>g>and</str<strong>on</strong>g><br />

84

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