A&A 526, A47 (2011)<strong>tel</strong>-<strong>00726959</strong>, version 1 - 31 Aug 2012Fig. 1. Spectra between 524.2 and 525.5 GHz observed towards Orion-KL with Herschel-HIFI (fil<strong>le</strong>d histogram) and LTE model produced withWeeds (continuous black line). The rest frequencies of several detected methanol lines are indicated.where c is the light speed and D is the diameter of the <strong>tel</strong>escope.T bg is the brightness temperature of the background emission,i.e. the physical temperature that would have a black body producingthe same background continuum emission (e.g. 2.73 Kfor the cosmic microwave background). T ex is the excitation temperature,and the opacity τ (ν) is:τ (ν) =c2 N tot∑(8πν 2 A i g i u e −Ei u /kT ex ehν i 0 /kT ex− 1 ) φ i (4)Q(T ex )iwhere the summation is over each line of the considered species.Here N tot is the total column density of the species considered,Q(T ex ) is the partition function, A i is the Einstein coefficient ofthe i line, g i u and E u are the upper <strong>le</strong>vel degeneracy and energyof the i line, and φ i is the i line profi<strong>le</strong> function. The latter isgiven by:φ i 1=σ √ 0) 2 /2σ 2 (5)2π e−(ν−νiwhere ν i 0the is i line rest frequency and σ the line width in frequencyunits at 1/e. σ can be expressed as a function of the lineFWHM in velocity units ΔV as follows:ν i 0σ =c √ ΔV. (6)8ln2Note that some of the model parameters may be degenerate incertain cases. In the optically thick or thin limits, the source sizeand temperature or the size and column density are degenerate,respectively (see Eqs. (1) and(3)). This degeneracy can be usuallylifted if both thick and thin lines are present in the survey,or if lines from an rare isotopologue are detected together withthe main one (e.g. 13 CH 3 OH and CH 3 OH). The source size mayalso be constrained from interferometric observations.Several components with e.g. different kinetic temperature orcolumn density can be included in the computation. For this, weassume that the various components are not coup<strong>le</strong>d radiatively– that is a photon from one component can not be absorbed bya another, foreground component – in which case the emergingspectrum is simply the sum of the brightness temperature ofeach components given by Eq. (1). Each of these component canbe Dopp<strong>le</strong>r-shifted with respect to each other, which is usefulwhen modeling sources with several components at different velocities.It is also possib<strong>le</strong> to compute the spectra from severalspecies; this is done by a summation of Eq. (1) over each specie.The column densities, kinetic temperatures, Dopp<strong>le</strong>r widthand source sizes for each species and components are read froma text fi<strong>le</strong>. Einstein coefficients, upper <strong>le</strong>vel degeneracy and energiesas well as the partition functions are taken from spectralline catalogs. Because these catalogs usually give the partitionfunctions at a few temperatures only, the partition function atthe user temperature is computed from a linear interpolation (orextrapolation if the user given temperature is outside the rangeof temperature provided in the catalog). When computing thesynthetic spectrum, a frequency sampling corresponding to theminimum ΔV divided by 10 is taken (or a frequency samplingequal to that of the observed spectra, if it smal<strong>le</strong>r than the minimumΔV divided by 10). This ensures that the sampling at allfrequencies and for all species and components is sufficient. Atthe end of the computation, the synthetic spectrum is re-samp<strong>le</strong>dto the same channel spacing than the observed spectrum in orderto take the channel dilution factor into account. This allows fora direct comparison between the synthetic and observed spectra.In Fig. 1, we show an examp<strong>le</strong> of such a modeling. The figureshows a spectrum between 524.2 and 525.2 GHz observedtowards Orion-KL with Herschel-HIFI as part of the HEXOSguaranteed time key program (Bergin et al. 2010). These datahave been already presented by Wang et al. (2010). SeveralA47, page 4 of 5
S. Maret et al.: Weeds: a CLASS extension for the analysis of millimeterand sub-millimeter spectral surveys<strong>tel</strong>-<strong>00726959</strong>, version 1 - 31 Aug 2012methanol lines are detected. On this figure we show model predictionscomputed with a Weeds for a sing<strong>le</strong> component sourcewith N(CH 3 OH) = 2 × 10 17 cm −2 , θ S = 18 ′′ , T = 80 Kand ΔV = 4kms −1 , and using the JPL database. Overall, themodel predictions are in good agreement with the observations– in particular, we reproduce successfully the relative intensityof the brightest lines. On the other hand, this simp<strong>le</strong> model underestimatesthe small line at 524 620 MHz and the shoulder at524 880 MHz, maybe suggesting several emitting componentsand/or non-LTE excitation. Note that for the given parametersthe emission is predicted to be optically thin, so that the columndensity and source size can not be constrained independently.A comp<strong>le</strong>te analysis of the methanol emission in this sourceis c<strong>le</strong>arly beyond the scope of this paper; however this examp<strong>le</strong>demonstrates how a simp<strong>le</strong> LTE model is useful to identifylines in a spectral survey. Finally, we have crossed-checked thesemodel predictions with CASSIS and two packages were foundto be in excel<strong>le</strong>nt agreement.4. Conclusions and prospectsWe have presented an extension of the CLASS data reductionsoftware for analyzing spectral surveys. This extension allowsthe user to make queries in spectral line databases using a VOcompliant protocol. It also allows the user to quickly search forthe various transitions of a given specie. Finally it can computemodel predictions at the LTE, as often needed to identify linesin spectra close to the confusion limit. Weeds has already beensuccessfully used to analyze part of the IRAS 16293-2422survey obtained with Herschel-HIFI (Bacmann et al. 2010;Hily-Blant et al. 2010), and we expect that it will be usefulfor future spectral surveys with this instrument as well. Wethink that it will become a standard tool for analyzing spectralsurveys obtained with sing<strong>le</strong> dish ground based <strong>tel</strong>escopes suchas the IRAM-30 m. Yet, Weeds is not limited to the analysisof sing<strong>le</strong> dish observations. It may be used to analyze spectralsurveys obtained with interferometers as well, such as theIRAM Plateau de Bure, CARMA, the SMA, and the upcomingALMA and eVLA interferometers. In fact, since Weeds iswritten in Python, it could be used from the Python basedCASA software, that will be used by the eVLA and ALMA.However, analyzing ALMA data will be chal<strong>le</strong>nging, becausethese data will consist in large spectral cubes, i.e. essentially aspectral survey on large number of pixels. In fact, doing suchan analysis by hand, i.e. identifying the various lines/specieson each spectrum of map is probably impossib<strong>le</strong>; this willrequire some automatic fitting tools to extract the re<strong>le</strong>vantinformation (column densities and excitation temperature of thevarious species) as a function of position. Such tools require efficientminimization algorithms to fit a model with a large numberof free parameters to the data. The development of such tools isalready in progress (e.g. in XCLASS using the MAGIX minimizationframework), and imp<strong>le</strong>menting these automatic fittingtools in Weeds would be desirab<strong>le</strong> in the future.Acknow<strong>le</strong>dgements. The authors would like to thank Peter Schilke andEmmanuel Caux for fruitful discussions on the analysis of spectral surveys. Weare also grateful to Charlotte Vas<strong>tel</strong> for helping us testing the LTE modeling donein Weeds against CASSIS, and to Shyia Wang for providing us the Orion-KLspectrum prior to publication. Finally, we wish to thank the persons in charge ofmaintaining and the CDMS, JPL and Paris VO databases; without their continuousefforts, the development of analysis software such as Weeds would not bepossib<strong>le</strong>. We are especially grateful to Holger Mül<strong>le</strong>r, Brian Drouin and NicolasMoreau for their help in imp<strong>le</strong>menting access to these databases in Weeds.ReferencesBacmann, A., Caux, E., Hily-Blant, P., et al. 2010, A&A, 521, L42Bardeau, S., Reynier, E., Pety, J., & Guilloteau, S. 2010, PYGILDAS:Inter<strong>le</strong>aving Python and GILDAS, Tech. Rep., IRAMBelloche, A., Menten, K. M., Comito, C., et al. 2008, A&A, 482, 179Bergin, E., Phillips, T., Comito, C., et al. 2010, A&A, 521, L20Beuther, H., Zhang, Q., Reid, M. J., et al. 2006, ApJ, 636, 323Blake, G. A., van Dishoek, E. F., Jansen, D. J., Groesbeck, T. D., & Mundy, L. G.1994, ApJ, 428, 680Blake, G. A., Sandell, G., van Dishoeck, E. F., et al. 1995, ApJ, 441, 689Blake, G. A., Mundy, L. G., Carlstrom, J. E., et al. 1996, ApJ, 472, L49Ceccarelli, C., Bacmann, A., Boogert, A., et al. 2010, A&A, 521, L22Comito, C., & Schilke, P. 2002, A&A, 395, 357Comito, C., Schilke, P., Phillips, T. G., et al. 2005, ApJS, 156, 127de Graauw, T., Helmich, F., Phillips, T., et al. 2010, A&A, 518, L6Goldsmith, P. F., & Langer, W. D. 1999, ApJ, 517, 209Herbst, E., & van Dishoeck, E. F. 2009, ARA&A, 47, 427Hily-Blant, P., Pety, J., & Guilloteau, S. 2005, CLASS Evolution: I. ImprovedOFT support, Tech. Rep., IRAMHily-Blant, P., Walms<strong>le</strong>y, M., Pineau Des forêts, G., & Flower, D. 2010, A&A,513, A41Johansson, L. E. B., Andersson, C., Ellder, J., et al. 1984, A&A, 130, 227Mül<strong>le</strong>r, H. S. P., Thorwirth, S., Roth, D. A., & Winnewisser, G. 2001, A&A, 370,L49Moreau, N., Dubernet, M. L., & Mül<strong>le</strong>r, H. 2008, in Astronomical Spectroscopyand Virtual Observatory, ed. M. Guainazzi, & P. Osuna, 195Pickett, H. M., Poynter, R. L., Cohen, E. A., et al. 1998, JQSRT, 60, 830Pilbratt, G. L., Riedinger, J. R., Passvogel, T., et al. 2010, A&A, 518, L1Salgado, J., Osuna, P., Osuna, M., et al. 2009, Simp<strong>le</strong> Line Access Protocol,Tech. Rep., International Virtual Observatory AllianceSchilke, P., Groesbeck, T. D., Blake, G. A., & Phillips, T. G. 1997, ApJS, 108,301Schilke, P., Benford, D. J., Hunter, T. R., Lis, D. C., & Phillips, T. G. 2001, ApJS,132, 281van Dishoeck, E. F., Blake, G. A., Jansen, D. J., & Groesbeck, T. D. 1995, ApJ,447, 760Wang, S., Bergin, E., Crockett, N., et al. 2010, A&A, submittedWootten, A. 2008, Ap&SS, 313, 9A47, page 5 of 5
- Page 1 and 2:
UNIVERSITÉ PIERRE ET MARIE CURIEHA
- Page 3 and 4:
tel-00726959, version 1 - 31 Aug 20
- Page 5 and 6:
Table des matières1 Rapport de sou
- Page 7 and 8:
Rapport après soutenanceHabilitati
- Page 9 and 10:
Chapitre 2Curriculum vitaetel-00726
- Page 11 and 12:
2.7 ANIMATION ET DIFFUSION DE LA CU
- Page 13 and 14:
2.8 PARCOURS 131992-1993 ÉCOLE NOR
- Page 15 and 16:
Chapitre 3Copyright: IRAM/PdBIIntro
- Page 17 and 18:
tel-00726959, version 1 - 31 Aug 20
- Page 19 and 20:
4.2 ETUDES DIRECTES EN ÉMISSION 19
- Page 21 and 22:
4.4 LA LUMINOSITY CO PAR MOLÉCULE
- Page 23 and 24:
356 E. Falgarone et al.: Extreme ve
- Page 25 and 26:
358 E. Falgarone et al.: Extreme ve
- Page 27 and 28:
360 E. Falgarone et al.: Extreme ve
- Page 29 and 30:
362 E. Falgarone et al.: Extreme ve
- Page 31 and 32:
364 E. Falgarone et al.: Extreme ve
- Page 33 and 34:
366 E. Falgarone et al.: Extreme ve
- Page 35 and 36:
368 E. Falgarone et al.: Extreme ve
- Page 37 and 38:
A&A 518, A45 (2010)1001010⌠⌡ τ
- Page 39 and 40:
A&A 518, A45 (2010)If X HCO + is as
- Page 41 and 42:
A&A 518, A45 (2010)tel-00726959, ve
- Page 43 and 44:
A&A 518, A45 (2010)tel-00726959, ve
- Page 45 and 46:
A&A 518, A45 (2010)Table E.2. Data
- Page 47 and 48:
A&A 541, A58 (2012)tel-00726959, ve
- Page 49 and 50:
A&A 541, A58 (2012)tel-00726959, ve
- Page 51 and 52:
A&A 541, A58 (2012)0.08 0.10.20.12
- Page 53 and 54:
A&A 541, A58 (2012)b=240.11 0.1 0.1
- Page 55 and 56:
0.080.09 0.1A&A 541, A58 (2012)0.14
- Page 57 and 58:
A&A 541, A58 (2012)43˚00'0.3 0.44
- Page 59 and 60:
A&A 541, A58 (2012)68˚00'1.1 0.91.
- Page 61 and 62:
A&A 541, A58 (2012)α(J2000)-19H57m
- Page 63 and 64:
A&A 541, A58 (2012)tel-00726959, ve
- Page 65 and 66:
A&A 541, A58 (2012)Jenkins, E. B.,
- Page 67 and 68:
A&A 541, A58 (2012)Galactic Latitud
- Page 69 and 70:
tel-00726959, version 1 - 31 Aug 20
- Page 71 and 72:
5.2 UNE PHYSIQUE BIEN CONTRAINTE ET
- Page 73 and 74:
5.3 PERSPECTIVES : DES RELEVÉS DE
- Page 75 and 76:
A&A 435, 885-899 (2005)DOI: 10.1051
- Page 77 and 78:
tel-00726959, version 1 - 31 Aug 20
- Page 79 and 80:
J. Pety et al.: Are PAHs precursors
- Page 81 and 82:
J. Pety et al.: Are PAHs precursors
- Page 83 and 84:
J. Pety et al.: Are PAHs precursors
- Page 85 and 86:
J. Pety et al.: Are PAHs precursors
- Page 87 and 88:
J. Pety et al.: Are PAHs precursors
- Page 89 and 90:
J. Pety et al.: Are PAHs precursors
- Page 91 and 92:
566 J. R. Goicoechea et al.: Low su
- Page 93 and 94:
568 J. R. Goicoechea et al.: Low su
- Page 95 and 96:
570 J. R. Goicoechea et al.: Low su
- Page 97 and 98:
572 J. R. Goicoechea et al.: Low su
- Page 99 and 100:
574 J. R. Goicoechea et al.: Low su
- Page 101 and 102:
576 J. R. Goicoechea et al.: Low su
- Page 103 and 104:
578 J. R. Goicoechea et al.: Low su
- Page 105 and 106:
580 J. R. Goicoechea et al.: Low su
- Page 107 and 108:
tel-00726959, version 1 - 31 Aug 20
- Page 109 and 110:
J. R. Goicoechea et al.: Low sulfur
- Page 111 and 112:
L42J. Pety et al.: Deuterium fracti
- Page 113 and 114:
L44J. Pety et al.: Deuterium fracti
- Page 115 and 116:
772 J. R. Goicoechea et al.: The io
- Page 117 and 118:
774 J. R. Goicoechea et al.: The io
- Page 119 and 120:
776 J. R. Goicoechea et al.: The io
- Page 121 and 122: 778 J. R. Goicoechea et al.: The io
- Page 123 and 124: 780 J. R. Goicoechea et al.: The io
- Page 125 and 126: 782 J. R. Goicoechea et al.: The io
- Page 127 and 128: A&A 494, 977-985 (2009)DOI: 10.1051
- Page 129 and 130: M. Gerin et al.: HCO mapping of the
- Page 131 and 132: M. Gerin et al.: HCO mapping of the
- Page 133 and 134: M. Gerin et al.: HCO mapping of the
- Page 135 and 136: M. Gerin et al.: HCO mapping of the
- Page 137 and 138: Table 1. Observation parameters for
- Page 139 and 140: A&A 534, A49 (2011)tel-00726959, ve
- Page 141 and 142: A&A 534, A49 (2011)tel-00726959, ve
- Page 143 and 144: A&A 534, A49 (2011)tel-00726959, ve
- Page 145 and 146: tel-00726959, version 1 - 31 Aug 20
- Page 147 and 148: tel-00726959, version 1 - 31 Aug 20
- Page 149 and 150: tel-00726959, version 1 - 31 Aug 20
- Page 151 and 152: tel-00726959, version 1 - 31 Aug 20
- Page 153 and 154: tel-00726959, version 1 - 31 Aug 20
- Page 155 and 156: tel-00726959, version 1 - 31 Aug 20
- Page 157 and 158: ¡¢£¤¥¢¦¢ §¨ ©
- Page 159 and 160: tel-00726959, version 1 - 31 Aug 20
- Page 161 and 162: 7.2 MODE INTERFÉROMÉTRIQUE 161tel
- Page 163 and 164: 7.3 LE FUTUR DE LA RADIO-ASTRONOMIE
- Page 165 and 166: CLASS evolution: I. Improved OTF su
- Page 167 and 168: CLASS evolution: I. Improved OTF su
- Page 169 and 170: A&A 526, A47 (2011)DOI: 10.1051/000
- Page 171: S. Maret et al.: Weeds: a CLASS ext
- Page 175 and 176: IRAM-30m EMIR time/sensitivity esti
- Page 177 and 178: IRAM-30m EMIR time/sensitivity esti
- Page 179 and 180: IRAM-30m HERA time/sensitivity esti
- Page 181 and 182: ¬þ«ðZñÛùþ˜ï³þ«ðWMõÑ
- Page 183 and 184: ¨-A¨-, #f¡§¨\¤qŠ’‹¼€(
- Page 185 and 186: ¤H F!";
- Page 187 and 188: #O.u\J0$!&%©ÉQ©6¦©¨-.u& (HÌ>
- Page 189 and 190: ¨*.G©6E¦cǦ©¨&ẗØn¨"!-‡
- Page 191 and 192: ¢¡¤£¦¥¨§ P© ¡ £¦¥¨§
- Page 193 and 194: '¥0vB"(-7£O.'¥!5#&(-7)7)(:9.*d#J
- Page 195 and 196: ¥¤¡ b@‚¥_ƒO@02,.(-EFJbe O@#V
- Page 197 and 198: 02J$#J+'10-ï 3 02EFJ+')EKJ5L5†R(
- Page 199 and 200: A&A 517, A12 (2010)tel-00726959, ve
- Page 201 and 202: A&A 517, A12 (2010)tel-00726959, ve
- Page 203 and 204: A&A 517, A12 (2010)tel-00726959, ve
- Page 205 and 206: A&A 517, A12 (2010)tel-00726959, ve
- Page 207 and 208: A&A 517, A12 (2010)tel-00726959, ve
- Page 209 and 210: A&A 517, A12 (2010)tel-00726959, ve
- Page 211 and 212: A&A 517, A12 (2010)tel-00726959, ve
- Page 213 and 214: A&A 517, A12 (2010)tel-00726959, ve
- Page 215 and 216: A&A 517, A12 (2010)tel-00726959, ve
- Page 217 and 218: Table C.1. Definition of the symbol
- Page 219 and 220: IRAM Memo 2011-2WIFISYN:The GILDAS
- Page 221 and 222: WIFISYN3. practiceWIFISYN3. practic
- Page 223 and 224:
WIFISYNA. implementation planWIFISY
- Page 225 and 226:
tel-00726959, version 1 - 31 Aug 20
- Page 227 and 228:
8.3 PERSPECTIVES 227tel-00726959, v
- Page 229 and 230:
3 REQUIREMENTS 44 CHANGES FOR END-U
- Page 231 and 232:
5 CHANGES FOR PROGRAMMERS 125 CHANG
- Page 233 and 234:
A EXHAUSTIVE DESCRIPTION OF THE CHA
- Page 235 and 236:
Chapitre 9Copyright: Stéphane Guis
- Page 237 and 238:
9.3 ACTIVITÉS 2008-2011 237tel-007
- Page 239 and 240:
Contribution de l'Action Spécique
- Page 241 and 242:
A. des multi-pixels à bure : une s
- Page 243 and 244:
5. besoins en services annexes, bé
- Page 245 and 246:
Articles publiés dans des revues
- Page 247 and 248:
ARTICLES PUBLIÉS DANS DES REVUES
- Page 249 and 250:
Mémos IRAM et ALMAtel-00726959, ve
- Page 251 and 252:
Actes de colloques nationaux et int
- Page 253 and 254:
ACTES DE COLLOQUES NATIONAUX ET INT
- Page 255 and 256:
tel-00726959, version 1 - 31 Aug 20