Mireille Consalvey PhD Thesis - University of St Andrews

More documents

Recommendations

Info

E E LLI 24- 22- 20- 18- 16- 14- 12- 10- 8- 6- 4- 2- 0 24- 22- 20- 18- 16- 14- 12- - 10 - 8- 6- 4- 2 0 (A) 06: 00 - (B) 06: 00 Low tide 08: 40 08: 00 10: 00 12: 00 14: 00 16: 00 18: 00 20: 00 Low tide 13: 00 High tide 19: 40 08: 00 10: 00 12: 00 14: 00 16: 00 18: 00 20: 00 Time Figure 6.13: Change in the light extinction co-efficient (mean , SE) over the day (A) Arlesford Creek (square) and the Hythe (circle) Day 1 1999 (B) Arlesford Creek (square) and Point Clear (circle) Day 2 1999
g Mi MS MS I r. IIII-iI r--r--Tý IIII C) 0 PPFD 0 8 8 00 8 (0 8 S c'J S 8 S S clj 1-2 1) 0 I-. m 7M < CD CD IP i (A >ý Z V :: L CD 12. Z0 CD týQ "s ýM rA
Page 1 and 2:
42 =>
Page 3 and 4:
Table of Contents Declaration ii Ac
Page 5 and 6:
4 Laboratory investigation into mic
Page 7 and 8:
temperatures on fluorescence parame
Page 9 and 10:
always been real sweeties. Also tha
Page 11 and 12:
Chl Chlorophyll Chl a Chlorophyll a
Page 13 and 14:
CHAPTER ONE GENERAL INTRODUCTION Wo
Page 15 and 16:
(, 'I, I 1)CI ii I lU RH araphid (n
Page 17 and 18:
dpl. II (I c I) cIq 111 I-Itro-ducJ
Page 19 and 20:
c 11 cIa 11 (T-oduct-Ioll integrate
Page 21 and 22:
( lapRl Wilclul IfInOdik 11011 impo
Page 23 and 24:
Chdpt(1111 1. -, -- I--, -- -- I, -
Page 25 and 26:
(-Jlaptýýr j( rcllcj-ý11 ý: - o
Page 27 and 28:
1.3.2. The Photosynthetic carbon re
Page 29 and 30:
( CflCI iii I TI )dU( t Zingmark 19
Page 31 and 32:
( lidptLI ( ft fln JI flU UII Di wh
Page 33 and 34:
Cha ter I (iclicl-al IntroiftwOoll
Page 35 and 36:
whilst cells minimise their exposur
Page 37 and 38:
1. Pigments Introduction Chlorophyl
Page 39 and 40:
Spectral reflectance studies examin
Page 41 and 42:
(-'Ilaptcýr J, I, -, --, --, --, -
Page 43 and 44:
( anci JII )tI( )(Jtk IO) which buf
Page 45 and 46:
( ! p1'1 -- -1 -ý T-( ý 1)era J-1
Page 47 and 48:
Uh Temporal changes in the microsca
Page 49 and 50:
(I (rcI IpuiE't, cells as they emer
Page 51 and 52:
( hap'wv -1 ( ýI II ntrodt 1ý t I
Page 53 and 54:
( hapi"T 1 11 1- 11 1- ---- -- -- 1
Page 55 and 56:
(A lal )te II- iý; 11 11 1 1- IIIJ
Page 57 and 58:
( 1ý lv-ý ý12, -) -, - -- - -- -
Page 59 and 60:
2.1.3. The Colne Estuary "VIt"utc-1
Page 61 and 62:
(I --- -- "I'l- I -11-1--l- -I--"--
Page 63 and 64:
E I I Uneven surface topography ma]
Page 65 and 66:
2.4. Wet bulk density (Equation 2.2
Page 67 and 68:
('liapti 2- 2.5.4. Cell identificat
Page 69 and 70:
( hapt )- acetone and DMF do not di
Page 71 and 72:
Chapter 2 Materials and Nlethocts P
Page 73 and 74:
Prior to a run all solvents were ge
Page 75 and 76:
(h1ft 'ý, I (I ', tý7! ýI)iI"Iý
Page 77 and 78:
QLapteLi2 2.6.6. Troubleshooting th
Page 79 and 80:
---- ------ at 486.5 nm on a Cecil
Page 81 and 82:
Figure 2.10. A) The fibre optic mea
Page 83 and 84:
tcl -1 Materials jnd 'Mclho(k attac
Page 85 and 86:
Chapt r2 Materials mid Methods A hi
Page 87 and 88:
2 2.9.2. Fluorescence parameters Fl
Page 89 and 90:
CHAPTER THREE ! i()fi1I1I 1]lILli\L
Page 91 and 92:
- -I ii-ofj) II 1- 1-() 111 llatim
Page 94 and 95:
Biofilill follllýltioll ailki de,
Page 96 and 97:
I Fresh sea water 0 inflow Petri di
Page 98 and 99:
" V. 74ý IkIftill AV Ali 4ft llý
Page 100 and 101:
CD 70 60 50 40 30 20 02468 10 12 14
Page 102 and 103:
'I) 3.5 3.0 2.5 2.0 1.5 1.0 0.5 0.0
Page 104 and 105:
Aiil- . -, ý'. 4 ý.. , lo "CJ U r
Page 106 and 107:
70 65 60 55 50 -m 45 0 C) cu E 40 3
Page 108 and 109:
3.1. There was a significant differ
Page 110 and 111:
(F5,12ý1.48, p=O. 266). The colloi
Page 112 and 113:
ý-Jofilj I I,, Corn I, atio IIoIId
Page 114 and 115:
100- 80- 60- 40- 20- 01 0 100-1 80
Page 116 and 117:
6) 5 4 3 2 I 01111 40 45 50 55 7- 6
Page 118 and 119:
llaptýýl 3 Riof-11111 f6l matioll
Page 120 and 121:
C, ý E z 6 5- 4 3- 6- 2- 5- _0 4-
Page 122 and 123:
13i(, )flllll f'ormatioll alld (]C\
Page 124 and 125:
Colloidal carbohydrates 13iof-11111
Page 126 and 127:
- ------ J i of -11 d 11 -i dd and
Page 128 and 129:
! )f]llfl 101 IfliltIoll l1l(l1l de
Page 130 and 131:
The presence of grazers in the fiel
Page 132 and 133:
Table 3.4: Correlative relationship
Page 134 and 135:
I. ahoratory investiLalion iln-lo-
Page 136 and 137:
Chapici 4 Laborator\ hivest' jgauml
Page 138 and 139:
11 tei 41 ahora ao I% tigallon -- i
Page 140 and 141:
"' 0 . C13 CIS m 1 1 ; -10 --1 5 -0
Page 142 and 143:
u r . mu tu Q) Q) P. Q) C) 2 ý- ý
Page 144 and 145:
liapiý,, i 4 iilvý: Ajt III()[) l
Page 146 and 147:
. ..... ..... kihorator wo Inicrol)
Page 148 and 149:
Water level 00 High tide Low 10 tid
Page 150 and 151:
Chapter 4 4.2.4. Pigment determinat
Page 152 and 153:
IIa lit ei--" -aborutorv II III to,
Page 154 and 155:
LO (n CD 0 140 120 100 80 =3 i; --
Page 156 and 157:
C: 0.5 0.4 0.3 0.2 0.1 .2o. o4 0 co
Page 158 and 159:
0.88 0.86 LO Eý 0.84 LLý 0.82 0.8
Page 160 and 161:
-C 100 200 300 400 500 PPFD (ý, mo
Page 162 and 163:
( li-, tp-lci 4_-, -- -, -1, aho_r
Page 164 and 165:
C: E 1.2 1.0 0.8 0.6 2 c:: 0.4 (D c
Page 166 and 167:
0.90 E 0.88 U- Li 0.86 0.84 Low tid
Page 168 and 169:
-. 1-Aho-ratory i 11-1ý1, -Clýtj
Page 170 and 171:
0 CL (D Cl) 0 CL x 0 w -0 21 G) cm
Page 172 and 173:
Rates of change (Eden April) 1) Ove
Page 174 and 175:
liapl, cr 4 1.. ahoray III%: (, 1:
Page 176 and 177:
0.82 'ý' 0.81 LL. . 2) 0.80 0.79 0
Page 178 and 179:
ce Cd -a gý- -+ Um (n " -C. , m CI
Page 180 and 181:
( hapt I ahorator u on ns1r / in wa
Page 182 and 183:
(11ýqjtý2i 4 I. abon'tiolvimc, .
Page 184 and 185:
J-1a Ii 1--c i oll Itil'o tll'! rw
Page 186 and 187:
( ! q)1 II CtRdtIO(I Ito flhII 01)h
Page 188 and 189:
In ýiw mw Ll->illýg CHAPTER FIVE
Page 190 and 191:
%im illvestiLalion into micronfivto
Page 192 and 193:
( /11 /Iu The following day the tan
Page 194 and 195:
Figure 5.2: (A) Experimental set-up
Page 196 and 197:
f- Ii 7-f .r- 1« Figure 5.3: (A) T
Page 198 and 199:
Table 5.5: Sampling schedules in si
Page 200 and 201:
Changes in Fluorescence parameters
Page 202 and 203:
5.3.2. Colne Estuary (U. K. ) Day 1
Page 204 and 205:
hi . ýilll jtlvý: SliLatiorl lilt
Page 206 and 207:
0 0- 0- C 0) 0- 2000 1500 )6 42 c:
Page 208 and 209:
ýifu ilivcSit'. 'alion ilito 1111c
Page 210 and 211:
5.3.3. Eden Estuary (U. K. ) Physic
Page 212 and 213:
300- 275- 250- 225- c 200- 0 :3 = 1
Page 214 and 215:
1.6 1.4 E 1.2 =3 D 0 1.0 0.8 0.6 0.
Page 216 and 217:
1'-1 wa 1wation 111to 1111cl YI In
Page 218 and 219:
ct C) 1: 1 ý, c r- 00 kf) a c) t)b
Page 220 and 221: ( hcqici Iii situ n Ito 1 ICI Oph\
Page 222 and 223: Cý, ýZlt]Oll 111to l! llCloDl)vLo
Page 224 and 225: n Sim Into Jlqý: loj! hyw be I Ith
Page 226 and 227: n wif Im iý ýI Im Ill to III 11ý
Page 228 and 229: hapler 5- In sill Iin vcstjý, a Ii
Page 230 and 231: ha In ýim ilm CS11,2anorl into --p
Page 232 and 233: 'hapt in I'l II cl-w II rl I,, CHAP
Page 234 and 235: (, 11 a tý-c-t -) --0 operational
Page 236 and 237: ( hdpir ( 1)ici iition in rlI]cIopl
Page 238 and 239: (--- 1)cI \ ai 1JI? )fl fl rfliL to
Page 240 and 241: Chapici 6 Dwl \ariatioriý, m biol-
Page 242 and 243: 11c1j)ft () I )1 ai a in iiioiJIi t
Page 244 and 245: (-J Table 6.2: Sampling schedule Ye
Page 246 and 247: 0 DI-cl (B) Sampling schedule March
Page 248 and 249: hajll(! l 0 \arij1jorv, -jn cc and
Page 250 and 251: CD C) CD 0 CD (D 000C, C> CD 0 LO N
Page 252 and 253: (D CD CD 000 06 0 C, C, 0 CD CD 00
Page 254 and 255: = - $: I. Ln -tj 03 9b 03 1=1 0 rq
Page 256 and 257: C> 00 (D CD- CD ci -02Q CD 2m -0 e
Page 258 and 259: 0 co "' - (A) 90- 80- 70-- ý() z-
Page 260 and 261: C) (Z 0- cu to o .=Vý E5 C> 7ý 4.
Page 262 and 263: a C 0 N N >1 m R (D r _0 c cu I -X:
Page 264 and 265: - - 7-2.1 ': --. ... .......... _t.
Page 266 and 267: ii . p. -'I;? I Sediment surfau-ý
Page 268 and 269: E 75 E =L 7ý5 .. 0 1400 - 1200- 10
Page 272 and 273: PPFD lam CD s 03 0 -1Z) N V (-) 0 4
Page 274 and 275: 0 Cl) I- 0 CD r4 cq ý2 9 CD co C)
Page 276 and 277: 1'1 1' 1 1" 1" I 040 VA "0 o' U. MS
Page 278 and 279: ( ldJ)t1 (I )i ii Predicted and mea
Page 280 and 281: ( () primary productivity (mg C (mg
Page 282 and 283: significantly higher in the top 0-2
Page 284 and 285: Chapter 6 Diel variations in microp
Page 286 and 287: ohic hioiihn-, sediment surface, oc
Page 288 and 289: ( () -I -- -- --- I---, - ---I, - -
Page 290 and 291: increasing PPFD; first an apparent
Page 292 and 293: Lj1)I ( i)icl dl ItR)fl Ii tfl)LI)J
Page 294 and 295: 6---- - -- , --- -- ---- -- -Dicl h
Page 296 and 297: ý w pwr-- 111 I I- CHAPTERSEVEN k_
Page 298 and 299: vs, iioil--mi ratorv -,, bioiflins
Page 300 and 301: ato I-V Vý11,11011-111! the total
Page 302 and 303: E LZ -0 5 L4 ý7- 'ol r a- 0I 00 CM
Page 304 and 305: ( hatei \1 'IcLtU1 S. iig a1or hiln
Page 306 and 307: cm E7 -*-Cover - Hole for probe Lid
Page 308 and 309: (A) rrr Uk Ilmol ms) Temperature Da
Page 310 and 311: C ulorv \ S. lloll-ml, ýrworv Nigh
Page 312 and 313: N-liý-, ralol v hiol-11111"', Tabl
Page 314 and 315: N1111 ý, ral ol-I -V--\ ". alorv -
Page 316 and 317: weeq 5upjr4es 6ulinp plalA eoueosaj
Page 318 and 319: ( llaptcl- -; " -1 -I", ý -, l, '
Page 320 and 321:
700 m (D ýo 0) 600 .2 03 U) 500 't
Page 322 and 323:
('11a -, - Pl(ýT I--I-- ,t, III ý
Page 324 and 325:
E -0 (ID 0 0 (ID 0 C 0 c-) -g H ,z
Page 326 and 327:
ý'Ilap! c 7 MI oratory vs. nop-miu
Page 328 and 329:
('haPltcT 7 -Migiatoiv \. -,. tion-
Page 330 and 331:
( iaptl 121 alory s l1o1iiflldtory
Page 332 and 333:
Hypothesis 5: NPQ will be highest a
Page 334 and 335:
minimum and maximum fluorescence yi
Page 336 and 337:
Cha )1(: r 'Vii--latorv ý-, -1 A I
Page 338 and 339:
v vs. 11011-IT . ratory hiolilms -M
Page 340 and 341:
Chapter 7 MiLlatorv v. ". lioll-lim
Page 342 and 343:
Chapt(j 7 s, non-im ratory biot-ilm
Page 344 and 345:
0 E H Cl. 0 -Izý "0 $n. -0 CA 7ý
Page 346 and 347:
( 'llapt c I'll" - 11 - -11,1 1111-
Page 348 and 349:
( llcpk'i_ ( rencral living on, as
Page 350 and 351:
cral I )isctv, -, jon Hythe showed
Page 352 and 353:
ý cKS -1-la-IM, -- (lencral Di-scu
Page 354 and 355:
Cha ici 8 Oencral Di-scussion large
Page 356 and 357:
Chaplet 8 I- I (-. Tciwr, al may th
Page 358 and 359:
( liapRi - ( icnerl I )! ', tR)II D
Page 360 and 361:
hapter ( cncra I )i ii in smaller t
Page 362 and 363:
8.4. Summary -( ic w ra 11, ) ISC L
Page 364:
9) LTS-EM analysis provided evidenc
Page 367 and 368:
9. Reference List PA , )ý ý, 1j,
Page 369 and 370:
photosynthesis and chlorophyll in t
Page 371 and 372:
Fauvel, P. and Bohn, G. (1907). Le
Page 373 and 374:
Blackwell scientific publications,
Page 375 and 376:
Kilhl, M., Glud, R. N., Ploug, H. a
Page 377 and 378:
Palmer, J. D. and Round, F. E. (196
Page 379 and 380:
Pinckney, J., Piceno, Y. and Lovell
Page 381 and 382:
Ser6dio, J., Marques da Silva, J. a
Page 383 and 384:
Wessels, N. K. and Hopson, J. L. (1
show all

Mireille Consalvey PhD Thesis - University of St Andrews

Create successful ePaper yourself

Delete template?

Save as template?