Redesigning Animal Agriculture

Precision Animal Breeding 79
Jansen, R.C., Johnson, D.L. and Van Arendonk, J.A. (1998) A mixture model approach to the mapping of
quantitative trait loci in complex populations with an application to multiple cattle families. Genetics
148, 391–399.
Jensen, P. and Andersson, L. (2005) Genomics meets ethology: a new route to understanding domestication,
behaviour, and sustainability in animal breeding. Ambio 34, 320–324.
Kappes, S.M., Keele, J.W., Stone, R.T., McGraw, R.A., Sonstegard, T.S., Smith, T.P., Lopez-Corrales, N.L. and
Beattie, C.W. (1997) A second generation linkage map of the bovine genome. Genome Research 7,
235–249.
Knott, S.A. and Haley, C.S. (1992) Maximum likelihood mapping of quantitative trait loci using full-sib families.
Genetics 132, 1211–1222.
Knott, S.A., Elsen, J.M. and Haley, C.S. (1994) Multiple marker mapping of quantitative trait loci in halfsib
populations. Proceedings of the 5th World Congress on Genetics Applied to Livestock Production.
WCGALP, Guelph, Canada, pp. 33–36.
Knott, S.A., Elsen, J.M. and Haley, C.S. (1996) Methods for multiple-marker mapping of quantitative trait loci
in half-sib populations. Theoretical and Applied Genetics 93, 71–80.
Knott, S.A., Marklund, L., Haley, C.S., Andersson, K., Davies, W., Ellegren, H., Fredholm, M., Hannson, I.,
Hoyheim, B., Lundstrom, K., Moller, M. and Andersson, L. (1998) Multiple marker mapping of quantitative
trait loci in a cross between outbred wild boar and large white pigs. Genetics 149, 1069–1080.
Kristenson, T.N. and Sorensen, A.C. (2005) Inbreeding – lessons from animal breeding, evolutionary biology
and conservation genetics. Animal Science 80, 121–133.
Lander, E.S. and Botstein, D. (1989) Mapping Mendelian factors underlying quantitative traits using RFLP linkage
maps. Genetics 121, 185–199.
Le Roy, P., Elsen, J.M., Boichard, D., Mangin, B., Bidanel, J.P. and Goffinet, B. (1998) An algorithm for QTL
detection in mixture of full and half sib families. Proceedings of the 6th World Congress on Genetics
Applied to Livestock Production. (Ed.) Organizing Committee WCGALP, Armidale, NSW, pp. 257–260.
Lehnert, S.A., Wang, Y.H. and Byrne, K.A. (2004) Development and application of a bovine cDNA microarray
for expression profiling of muscle and adipose tissue. Australian Journal of Experimental Agriculture 44,
1127–1133.
Lynch, M. and Walsh, B. (1998) Genetics and Analysis of Quantitative Traits. Sinauer Associates Inc.,
Sunderland MA, USA.
Mackinnon, M.J., Meyer, K. and Hetzel, D.J.S. (1991) Genetic variation and covariation for growth, parasite
resistance and heat tolerance in tropical cattle. Livestock Production Science 27, 105–122.
Meuwissen, T.H.E. and Goddard, M.E. (1997) Estimation of effects of quantitative trait loci in large complex
pedigrees. Genetics 146, 409–416.
Meuwissen, T.H.E. and Goddard, M.E. (2000) Final mapping of quantitative trait loci using linkage disequilibria
with closely linked marker loci. Genetics 155, 421–430.
Nobis, W., Ren, X., Suchyta, S.P., Suchyta, T.R., Zanella, A.J. and Coussens, P.M. (2003) Development of a porcine
brain cDNA library, EST database, and microarray resource. Physiological Genomics 16, 153–159.
Olson, T.A., Filho, K.E., Cundiff, L.V., Koger, M., Butts, W.T. Jr and Gregory, K.E. (1991) Effect of breed group by
location interaction on crossbred cattle in Nebraska and Florida. Journal of Animal Science 69, 104–114.
Olson, T.A., Lucena, C., Chase C.C. Jr, and Hammond, A.C. (2003) Evidence of a major gene influencing hair
length and heat tolerance in Bos taurus cattle. Journal of Animal Science 81, 80–90.
Orr, H.A. (2005) Theories of adaptation: what they do and don’t say. Genetica 123, 3–13.
Patterson, H.D. and Thompson, R. (1971) Recovery of interblock information when block sizes are unequal.
Biometrika 63, 83–92.
Prayaga, K.C. (2003a) Evaluation of beef cattle genotypes and estimation of direct and maternal genetic effects
in a tropical environment 1. Growth traits. Australian Journal of Agricultural Research 54, 1013–1025.
Prayaga, K.C. (2003b) Evaluation of beef cattle genotypes and estimation of direct and maternal genetic effects
in a tropical environment 2. Adaptive and temperament traits. Australian Journal of Agricultural Research
54, 1027–1038.
Prayaga, K.C. (2003c) Final Report on Belmont Crossbreeding Project. Meat and Livestock Australia, Sydney.
Prayaga, K.C. (2004) Evaluation of beef cattle genotypes and estimation of direct and maternal genetic effects
in a tropical environment 3. Fertility and calf survival traits. Australian Journal of Agricultural Research
55, 811–824.
Prayaga, K.C. and Henshall, J.M. (2005) Adaptability in tropical beef cattle: genetic parameters of growth,
adaptive and temperament traits in a crossbred population. Australian Journal of Experimental Agriculture
45, 971–983.