School of Engineering and Science - Jacobs University
School of Engineering and Science - Jacobs University
School of Engineering and Science - Jacobs University
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Results<br />
5.1.3 Screening for an additional siderophore <strong>of</strong> Pss22d by r<strong>and</strong>om<br />
mutagenesis<br />
In order to identify biosynthetic genes responsible <strong>of</strong> the potential second<br />
siderophore <strong>of</strong> Pss22d, a r<strong>and</strong>om mutagenesis was conducted. For this we<br />
used a modified mini-Tn5 construct derived from pCAM140 (Wilson et al.,<br />
1995). The plasmid pCAM-Not was constructed by Dr. Helge Weingart via<br />
deletion <strong>of</strong> the gusA gene by NotI digest <strong>of</strong> pCAM140. R<strong>and</strong>om mutagenesis<br />
was performed by conjugating the plasmid pCAM-Not in both, Pss22d∆pvsA<br />
<strong>and</strong> Pss22d wt. The r<strong>and</strong>om character <strong>of</strong> transposon insertion-loci was verified<br />
by analysis <strong>of</strong> size distribution among the transposon-tagged fragments in<br />
Pss22d∆pvsA tansconjugants, as follows. Genomic DNA <strong>of</strong> 17 Tn5 mutants <strong>of</strong><br />
Pss22d∆Pvd was digested with PstI (Fig.11A) <strong>and</strong> ClaI (Fig.11B) <strong>and</strong><br />
hybridized with a probe against Tn5 at 60°C. The resulting distribution pattern<br />
did not show any redundancy <strong>of</strong> fragment sizes, thus it could be assumed that<br />
the mutagenesis had resulted in r<strong>and</strong>om Tn5 insertion.<br />
Size (kb)<br />
A<br />
B<br />
Fig. 11. Distribution <strong>of</strong> mini-Tn5 insertions in Pss22d∆Pvd.<br />
17 Tn5 mutants <strong>of</strong> Pss22d∆Pvd were analysed for their loci <strong>of</strong> transposon<br />
insertion. Genomic DNA was digested with PstI (A) <strong>and</strong> ClaI (B) <strong>and</strong> examined by<br />
Southern blot analysis for the size <strong>of</strong> the Tn5 insertion fragment. The probe was<br />
derived against the BamHI fragment <strong>of</strong> the transposon.<br />
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