EPS matrix showed that it consists mainly of polysaccharides (50%),proteinaceous compounds (20%), and lipids (10%), while humic acids,uronic acids, and nucleic acids account for the rest of the matrix. Styrenestimulated substantially the production polysaccharides compared to nonsolventconditions. This study underlines the enhanced robustness ofbiofilms in solvent saturated environments, which is supposedly acombination of effects such as the increased EPS production, physiologicalchanges due to adaptation, slow growth and other resistance mechanisms.[1] Halan, B. et al (2010): Maximizing the productivity of catalytic biofilms on solid supports inmembrane aerated reactors. Biotechnol Bioeng: 106: 516-527.[2] Halan, B. et al (2010): Real time solvent tolerance analysis of Pseudomonas sp. strain VLB120ΔCcatalytic biofilms (submitted).GWV020Asymmetric benzylic hydroxylation and epoxidation ofalkylbenzenes and styrene derivatives by Agrocybeaegerita aromatic peroxygenaseM. Kluge* 1 , R. Ullrich 1 , K. Scheibner 2 , M. Hofrichter 11 Bio- and Environmental Sciences, International Graduate School (IHI)Zittau, Zittau, Germany2 Biology, Chemistry and Process Technology, University of AppliedSciences Lausitz, Senftenberg, GermanyOptically pure C α-hydroxy alkylbenzenes and C α-C β styrene epoxides are ofvital interest as building blocks in the synthesis of pharmaceuticals and finechemicals. In particular chiral epoxides offer two defined stereo centers inring opening reactions. The agaric mushroom Agrocybe aegerita produces aheme-thiolate peroxygenase (AaeAPO) belonging to a new class of aromaticperoxygenases (APOs) that shares spectral and catalytic properties both withperoxidases and cytochrome P450 monooxygenases and catalyses variousoxygenation reactions. Hydroxylations and epoxidations proceed withsometimes virtually perfect stereoselectivity yielding phenyl alcohols andoxiranes, respectively. Typical substrates are non activated hydrocarbonssuch as alkylbenzenes and styrene derivatives as well as their cycloalkylbenzene analogons. Enantiomeric excesses greater than 99% and totalturnovers up to 110,000 cycles are achieved. Besides this, the apparentkinetic K M- (k cat-) values determined for ethyl and propyl benzenehydroxylation to 694 μM (409 s -1 ) and 480 μM (194 s -1 ) supportimplementation into technical processes. Mechanistic aspects regardingstereoselectivity and oxygen incorporation are further objects of discussion.GWP001Characterization of immobilized alkaline cyclodextringlycosyltransferase from a newly isolated Bacillusagaradhaerens KSU-A11A. Ibrahim*, M. El-Tayeb, A. Al-SalamahFaculty of Science, Department of Microbiology, King Saud University,Riyadh, Saudi ArabiaAlkaliphilic bacteria were isolated from soil and water samples obtainedfrom Egyptian soda lakes (Wadi Natrun area, Egypt). Screening forcyclodextrin glycosyltransferase-producing alkaliphilic bacteria resulted inisolation of 10 positive strains. Strain KSU-A11 was selected as the bestCGTase producer (2.1 U/ml). 16S rDNA sequence analysis identified theKSU-A11strain as Bacillus agaradhaerens. CGTase was partially purifiedusing starch adsorption technique. The partially purified CGTase wasimmobilized on chitin by covalent binding tecnique using cross linkingreaction with high immobilization yield (85%). The properties of the freeand immobilized CGTase were determined. The optimum pH of theimmobilized enzyme was slightly higher than that of the free enzyme, pH 10and 10.5 respectively. In addition, both free and immobilized CGTaseretained 94 to 100 % of its initial activity over a wide pH range (pH 6.0 to11.0). The enzymatic activity of both free and immobilized CGTase washighest at temperature 50 ºC; however, the relative activities of theimmobilized enzyme were slightly higher than those of the free enzyme.Furthermore, investigation of thermostability of the enzyme indicated thatthe immobilization process of CGTase on chitin significantly protected theenzyme against thermo-inactivation. Kinetic parameters Km and Vmaxvalues for free and immobilized enzymes were estimated and while therewas no change in the Vmax value for both free and immobilized CGTase(83.3 μmol/min. mg), the Km of the enzyme increased from 14.28 to 20mg/ml upon immobilization. The immobilization of the enzyme showedhigh operational stability by retaining about 50% of the initial activity afternine uses.GWP002Investigations of microalgal growth kinetics and theflashing light effectA. Jacobi*, C. PostenInstitute of Engineering in Life Sciences, Bioprocess Engineering, <strong>Karlsruhe</strong>Institute of Technology (KIT), <strong>Karlsruhe</strong>, GermanyThe construction of economic pilot plant photobioreactors exhibits stillmajor problems due to insufficient scale-up of technical parameters from labto larger scale. The layout of large scale photobioreactors requires theknowledge of the physiological reactions of the specific strain(s) moreoverthe resulting kinetics of growth and product formation under differentillumination conditions (light intensity, frequency of light/dark cycles) are offundamental interest and importance. Therefore a scale-down approach wassuccessfully applied for identification and determination of these relevantand critic parameters. The conditions in one volume element of a largereactor are mimicked in a small scale model reactor. The configuration andsuccessful application of this model reactor for investigation ofChlamydomonas’ growth under constant and flashing light conditions willbe presented in this contribution.The model reactor comprises a special designed illumination devicedeveloped using light emitting diodes (LEDs) and collimating lensesresulting in an entirely homogenous illuminated volume. The focusing effect(lens effect) of the light source to the center of the reactor compensates themutual shading of the algae cells. Measurements of light intensitydistribution inside the reactor containing media of different optical densitieswill be shown which could verify the homogenous illumination in rangesrelevant for determination of growth kinetics.Besides the model reactor was applied for kinetic investigations of differentalgae in various operating modes (Batch, Fed-Batch and ContinuousCulture). For instance the effect of reduced antenna size on growth rates ofChlamydomonas reinhardtii mutants at different light intensities comparedto the non-mutated strain will be depicted. Experiments have beenperformed under constant illumination up to very high, saturating andalready inhibiting light conditions. Furthermore the positive effect of fastlight/dark cycles on growth rate (flashing light effect) was examined andrelevant rates were identified.[1] Rosello Sastre, R. et al (2007): Scale-down of microalgae cultivations in tubular photo-bioreactors-a conceptual approach. Journal of Biotechnology 132 (2):127-133.GWP003Modified Galactitol-Dehydrogenase from Rhodobactersphaeroides D for Electrochemical ApplicationsG.-W. Kohring* 1 , S. Gauer 1 , P. Kornberger 1 , C. Gumhold 1 , J. Gajdzik 2 ,R. Hempelmann 2 , C. Søndergaad 3 , J. Jensen 3 , H. Christian 4 , A. Faust 4 ,Y. Carius 5 , A. Scheidig 4 , F. Giffhorn 11 Institite for Microbiology, Saarland University, Saarbrücken, Germany2 Department of Physical Chemistry, Saarland University, Saarbrücken,Germany3 Bioinformatics Center, University of Copenhagen, Copenhagen, Denmark4 Structural Biology, University of Kiel, Kiel, Germany5 Department of Structural Biology, Saarland University, Homburg,GermanyDehydrogenases represent an important class of enzymes in biotechnology.By enantioselective reduction or oxidation they provide access to rare sugarsand alcohols which may serve as optically pure compounds and chiralbuilding blocks in the pharmaceutical and chemical industry.The 765 bp sequence of the galactitol dehydrogenase [1] (GatDH) genecoding for a subunit of the homotetrameric enzyme with 254 amino acidsand a molecular mass of 26.4 kDa was functionally expressed in Escherichiacoli BL21Gold(DE3). The heterologously expressed GatDH was elongatedby the attachment of a His(6)-tag to the N-terminus of the protein whichfacilitated the purification and did not affect the catalytic activity. The activeconformation is strictly dependent on the presence of bivalent cations likeMg2+. The crystal structure revealed that the Mg-ions are coordinated bythe last three amino acids of the C-termini from two dimers, which let thetetramer appear as a dimer of dimmers [4]. To illustrate the mechanisms ofthe active site, the deduced oxidation of pentanediol is depicted.spektrum | Tagungsband <strong>2011</strong>
The recombinant enzyme was modified by addition of two cysteins,arranged in front of the His-tag, to make use of the enzyme forelectroenzymatic applications. The enzyme variant exhibited unaffectedactivity in solution and the cystein-residues enabled a directedimmobilization of the enzyme to gold electrodes without a further linkermolecule.The electrochemical reoxidation of the co-substrate NAD+, hencethe successful biofunctionalization of the electrode was monitored by cyclicvoltammetry (CV) [2,3]. Determination of CVs with increasing substrateconcentrations enabled Km-value determinations of 0.06 mM, exhibiting aslightly increased affinity to the biochemical value in solution of 0.2 mM.By use of bioinformatic methods several amino acid exchanges have beensuggested for developing enzymes with increased stability and the mutantshave been constructed.[1] Schneider, K.H. et al (1995): Microbiology 141, 1865-1873.[2] Gajdzik, J. et al (2007): J. Solid State Electrochem. 11, 144-149.[3] Kornberger P. et al (2009): Langmuir 25, 12380-12386.[4] Carius, Y. et al (2010). J. Biol. Chem. 285, 20006-20014.GWP004Uptake and utilization of glucosamine inCorynebacterium glutamicumA. Uhde*, T. Maeda, V. Liedschulte, G. Seibold, R. Krämer, K. MarinInstitute of Biochemistry, University of Cologne, Cologne, GermanyCorynebacterium glutamicum is a Gram-positive biotin-auxotrophicactinobacterium primarily applied for the industrial production of aminoacids like L-glutamate and L-lysine. Since feedstock costs hold a significantpart of overall fermentation costs it is desirable to use low-cost, renewableresources like hydrolysed lignocellulose and/or chitin-rich polysaccharides.Such feedstocks contain a variety of different carbohydrates includingglucose, glucosamine or N-acetylglucosamine. Interestingly, utilization ofamino sugars was not investigated for C. glutamicum yet. We addresseduptake of glucosamine to explore the metabolic set-up for its utilization.C. glutamicum is able to grow on glucosamine as sole carbon and nitrogensource, but only with half the growth rate than on glucose as carbon sourcewas observed. In contrast to many other substrates glucosamine and glucoseare not simultaneously metabolized by C. glutamicum. Since a hpr mutant ofC. glutamicum is not capable to utilize glucosamine participation of a PTStypecarrier (phosphostransferase systems) was indicated. Growth assayswith mutants lacking PtsG (glucose), PtsF (fructose) or PtsS (sucrose)revealed that PtsG is the sole uptake system for glucosamine in C.glutamicum. Transport assays with radiolabeled substrates were performedto characterize the kinetics of glucoseamine uptake indicating that PtsGmediates glucoamine uptake as side activity. The impact of the PtsGdependent glucosamine uptake on the efficiency of its utilization will bediscussed.which mixed fermentation kinetics were observed. Bacteriocin productioncommenced only when the broth pH dropped to levels of ~3.5 due to acidproduction at approximately 15 hours.These observations suggest that an oxidative metabolic pathway is involvedin biosynthesis and that conversion of prepeptides to active peptides takesplace upon acidification of the broth. Irrespective of the microorganismused, a feeding strategy for maintaining the pH at 3.5 and glucose at 20 g/Lfrom 10 hours, extended the production period and almost doubled the yieldof secreted proteins in all cases.GWP006Pediocin production from Weissella paramesenteroides infermentation systems: Glucose feeding strategies andyields.M. Papagianni*School of Veterinary Medicine, Food Hygiene and Technology,Thessaloniki, GreeceAn atypical meat isolated Weissella paramesenteroides strain was found toproduce a class II a bacteriocin of approximately 5 kDa M.W. Thebacteriocin was partly characterized and studied with respect of variousphysicochemical and biochemical properties of its molecule. Following thebacteriocin molecule studies, attempts were made to optimize production infermentations carried out in a 3-L stirred tank bioreactor.The effect of the concentration of glucose in the substrate was studied inbatch cultures in which initial concentrations varied between 10 and 30 g/L.The glucose effect was also studied in fed-batch cultures operated asglucostats and pH-stats. In these runs feeding started at 10 hours whileglucose and pH were maintained at stable levels: 10, 15, 20, 25, and 30 g/Lglucose and pH 3.5. Another feeding strategy was also applied in which aglucose solution was fed in single shots in batch runs with initial glucoseconcentration of 10, 15, and 20 g/L. Maximum bacteriocin production levelsin batch cultures reached 850 AU/ml under semiaerobic conditions and with25 g/L initial glucose concentration.Maintaining stable levels of glucose and pH extended the production periodin all runs however, an optimum was observed for glucose concentrationlevels at 25 g/L, at which production levels were the highest (1500 AU/ml).Fermentation process kinetic studies showed growth-associated productionfor glucose levels ≥20 g/L. Substituting the production medium with glucoseat time-points at which specific production rates started to drop resulted inhigher specific productivities however, the optimum concentration of 25 g/Lglucose was again observed in this type of feeding.Therefore, the concentration of the carbon source plays an important role inbacteriocin production from W. paramesenteroides and manipulating itslevels by choosing the appropriate mode of fermentation can lead tosignificant increases in process productivities.GWP005Class IIa bacteriocins from Pediococci: Production infermentation systemsM. Papagianni*School of Veterinary Medicine, Food Hygiene and Technology,Thessaloniki, GreeceClass IIa bacteriocins of lactic acid bacteria are structurally related proteinswith a molecular weight ranging between 2-6 kDa. Their N-terminuscontains a highly conserved region known as the pediocin box, with thecharacteristic amino acid sequence of -YGNGV-. These bacteriocins areknown as the pediocin-like and Listeria-active bacteriocins. Since the firstisolated pediocin PA-1 from Pediococcus acidilactici, a number of otherpediocins from more or less related species have been isolated and partlycharacterized. These bacteriocins, apart from their broad inhibition spectratowards Gram-positive food spoilage and pathogenic bacteria, exhibittechnologically important properties -e.g. maintenance of activity atsterilization or freezing temperatures and at pHs ranging from 2 to 10, whichmake them important potential biopreservatives.In this work, we report on the common characteristics of production of thenewly identified pediocins from P. acidilactici, P. pentosaceus and P.damnosus in batch and fed-batch fermentation systems. Kinetic studies onfermentations carried out under different dissolved oxygen levels in a 3-Lstirred tank bioreactor, run at 150 rpm and 30 o C, revealed that in all casesDO levels of 50-60% supported bacteriocin production with growthassociatedand primary metabolite kinetic patterns and higher specificproductivities compared to anaerobic or fully aerobic conditions underGWP007Characterization of the 1,3-PD dehydrogenase ofClostridium sp. IBUN 13A and establishment of anenzyme assay for measuring 1,3-PDS. Franz 1 , J. Montoya* 1 , D. Montoya 2 , P. Dürre 1 , B. Schiel-Bengelsdorf 11 Institute of Microbiology and Biotechnology, University of Ulm, Ulm,Germany2 Institute of Biotechnology, National University of Colombia , Bogota D.C.,ColombiaThe non-pathogen strains Clostridium sp. IBUN 158B and IBUN 13A wereisolated from the soil of Colombian tomato and potato fields. These strainsbelong to a new species, closely related to C. butyricum, and are able totransform residual glycerol from biodiesel production into 1,3-propanediol(1,3-PD). In order to establish a competitive industry based on these strains,their 1,3-PD yield should be increased by means of genetic engineering. Formeasurement of 1,3-PD, an enzymatic assay based on the enzyme 1,3-PDdehydrogenase of strain IBUN 13A (encoded by the dhaT gene) wasestablished. This NAD + -dependent enzyme converts 1,3-PD into 3-hydroxypropionaldehyde, and the proportional amount of NADH producedcan be detected spectrophotometrically at 340 nm. In order to overproducethe enzyme, the dhaT gene of IBUN 13A was cloned into the vector pET-28a(+) of Novagen® (which adds an N-terminal his-tag to the enzyme), andthe resulting plasmid was transformed into E. coli BL21(DE3). As theenzyme is sensitive to oxygen, the whole purification process was performedunder anaerobic conditions. After cell disruption using a French Press, thespektrum | Tagungsband <strong>2011</strong>
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12 GENERAL INFORMATION · SPONSORS
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14 GENERAL INFORMATIONEinladung zur
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16 AUS DEN FACHGRUPPEN DER VAAMFach
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18 AUS DEN FACHGRUPPEN DER VAAMFach
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20 AUS DEN FACHGRUPPEN DER VAAMFach
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22 INSTITUTSPORTRAITMicrobiology in
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INSTITUTSPORTRAITGrundlagen der Mik
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28 CONFERENCE PROGRAMMECONFERENCE P
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32 SPECIAL GROUPSACTIVITIES OF THE
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ISV01The final meters to the tapH.-
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ISV11No abstract submitted!ISV12Mon
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ISV22Applying ecological principles
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ISV31Fatty acid synthesis in fungal
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AMV008Structure and function of the
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pathway determination in digesters
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nearly the same growth rate as the
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the corresponding cell extracts. Th
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AMP035Diversity and Distribution of
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The gene cluster in the genome of t
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ARV004Subcellular organization and
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[1] Kennelly, P. J. (2003): Biochem
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[3] Yuzenkova. Y. and N. Zenkin (20
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(TPM-1), a subunit of the Arp2/3 co
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in all directions, generating a sha
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localization of cell end markers [1
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By the use of their C-terminal doma
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possibility that the transcription
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Bacillus subtilis. BiFC experiments
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published software package ARCIMBOL
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EMV005Anaerobic oxidation of methan
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esistance exists as a continuum bet
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ease of use for each method are dis
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ecycles organic compounds might be
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EMP009Isotope fractionation of nitr
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fluxes via plant into rhizosphere a
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EMP025Fungi on Abies grandis woodM.
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nutraceutical, and sterile manufact
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the environment and to human health
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EMP049Identification and characteri
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NTP019Identification and metabolic
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OTV008Structural analysis of the po
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and at least 99.5% of their respect
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[2] Garcillan-Barcia, M. P. et al (
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OTP022c-type cytochromes from Geoba
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To characterize the gene involved i
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OTP037Identification of an acidic l
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OTP045Penicillin binding protein 2x
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[1] Fokina, O. et al (2010): A Nove
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PSP006Investigation of PEP-PTS homo
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PSP022Genome analysis and heterolog
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Correspondingly, P. aeruginosa muta
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RGP002Bistability in myo-inositol u
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contains 6 genome copies in early e
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a novel initiation mechanism operat
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RGP035Kinase-Phosphatase Switch of
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RGP043Influence of Temperature on e
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[3] was investigated. The specific
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transcriptionally induced in respon
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during development of the symbiotic
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[2] Li, J. et al (1995): J. Nat. Pr
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Such a prodrug-activation mechanism
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cations. Besides the catalase depen
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SRP016Effect of the sRNA repeat RSs
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CODH after overexpression in E. col
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acteriocines, proteins involved in
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264 AUTORENBreinig, F.FBP010FBP023B
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266 AUTORENGoerke, C.Goesmann, A.Go
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268 AUTORENKlaus, T.Klebanoff, S. J
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270 AUTORENMüller, Al.Müller, Ane
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272 AUTORENScherlach, K.Scheunemann
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274 AUTORENWagner, J.Wagner, N.Wahl
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276 PERSONALIA AUS DER MIKROBIOLOGI
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278 PROMOTIONEN 2010Lars Schreiber:
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280 PROMOTIONEN 2010Universität Je
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282 PROMOTIONEN 2010Universität Ro
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Die EINE, auf dieSie gewartet haben