GWP016O-demethylenation catalyzed by fungal aromaticperoxygenasesM. Poraj-Kobielska*, M. Kinne, G. Kayser, M. HofrichterUnit of Environmental Biotechnology, International Graduate School ofZittau, Zittau, GermanyThe (methylenedioxy)phenyl group (Phe 1 -O-C-O-Phe 1 ) is found inpharmacologically active compounds, insecticides and diverse products ofthe secondary plant metabolism. In principle this group protects a reactivecatechol (OH-Phe 1 -OH) and is therefore suggested to increase the half life(action, toxicity etc.) of the respective substance. In human, this moiety ispredominately oxidized by cytochrome P450s (P450s) to yield a reactivecatechol that can be further metabolized. Here we report that fungal aromaticperoxygenases (APOs) secreted by Agrocybe aegerita, Coprinellus radiansand Coprinopsis verticillata are able to oxidize the methylenedioxy group togive the corresponding catechols. The peroxygenases oxidized various 1,3-benzodioxoles including natural compounds such as pisatin, safrole andmyristicin as well as the entactogenic drugmethylenedioxymethamphetamine (ecstasy). Moreover, we could show thata colorless aqueous solution of 1,2-(methylenedioxy)-4-nitrobenzene turnedimmediately into a bright yellow at pH 7 caused by the formation of 4-nitrocatechol. This reaction was exploited to develop a peroxygenase assayfor the rapid spectrophotometric and colorimetric characterization of thisreaction. Moreover, steady-state kinetics results with 1,2-(methylenedioxy)-4-nitrobenzene, gave parallel double reciprocal plots suggestive of a pingpongmechanism and the presence of H 2 18 O 2 gave no incorporation of 18 Ointo the catechol group of the resulting 4-nitrocatechol, which points to anmechanism similar to that observed in P450s. Our results show that fungalperoxygenases are able to oxidize the methylenedioxy group, which is aphysiological interesting reaction and can be a useful tool in the screening offungi and other microorganisms for extracellular peroxygenase activities.GWP017Production of human drug metabolites with fungalperoxygenasesM. Kinne*, M. Poraj-Kobielska, R. Ullrich, G. Kayser, M. HofrichterUnit of Environmental Biotechnology, International Graduate School ofZittau, Zittau, GermanyThe synthesis of oxygenated/hydroxylated human drug metabolites viaselective monooxygenation is still a challenging task for the syntheticchemist. Here we report that aromatic peroxygenases (APOs) secreted byagaric fungi such as Agrocybe aegerita (AaeAPO) and Coprinellus radians(CraAPO) catalyze the H 2O 2-dependent selective monooxygenation ofdiverse drugs. The results showed that the reactions proceededregioselectively, giving isomeric purities of 99% and yields up to 90% of thedesired metabolites. Mass spectral analysis of the metabolites formed duringthe AaeAPO-catalyzed oxidation of tolbutamide in the presence of H 2 18 O 2 inplace of H 2O 2 showed a shift of the principal [M+H] + ion from m/z 287 tom/z 289 in case of 4-hydroxytolbutamide, which points to a trueperoxygenase mechanism. Moreover, the intramolecular deuterium isotopeeffect [(k H/k D)obs] of the peroxygenase-catalyzed O-dealkylation of N-(4-[1-2 H]ethoxyphenyl)-acetamide was 3.1 ± 0.2, which indicate a P450-likereaction mechanism. Interestingly, both enzymes oxidized the estrogenreceptor antagonist tamoxifen to 4-hydroxytamoxifen, endoxifen and N-desmethyltamoxifen, whereas oseltamivir (Tamiflu ® ) was only oxidized byCraAPO (80% conversion into the ester cleavage product oseltamivircarboxylate). Our results clearly indicate that fungal peroxygenases may bea useful biocatalytic tool to prepare diverse pharmacologically relevantmetabolites.GWP018Analysis on biotinylation and biotin metabolism inCorynebacterium glutamicumP. Peters-Wendisch*, C. Stansen, S. Götker, J. Schneider, S. Götker,V.F. WendischFaculty of Biology, Genetics of Prokaryotes, University of Bielefeld,Bielefeld, Germanysynthesis pathway are annotated, as well as a gene cluster showing highidentity on protein level to a biotin transport system (bioYMN) from R. etli[1]. C. glutamicum also possesses a gene that is annotated as a putativebiotin protein ligase gene (birA). Here we describe the functional analysis ofbioYMN and birA.Since glutamate production of C. glutamicum is triggered by biotinlimitation the influence of biotin was analysed with a bioYMNoverexpressing strain. It could be shown that overexpression of the genecluster led to a two fold decrease in yield of glutamate production perbiomass (Y p/x) under biotin limiting growth conditions. This corroborates theassumption that bioYMN encodes a biotin transport system in C.glutamicum.In E. coli the biotin genes are regulated by the bifunctional BirA protein,which is active as biotin-protein ligase and as transcriptional repressor of thebio-genes [2]. BirA from C. glutamicum lacks an N-terminal DNA-bindingdomain and is not regulating biotin metabolism, as it was shown bytranscriptome analysis. In order to characterize the function of BirA from C.glutamicum, an enzyme assay was developed. A short (105 aa) His-taggedbiotin-carrier-protein (BCCP) was constructed from the AccBC subunit (591aa) of acetyl-CoA carboxylase from C. glutamicum and isolated via Ni-NTAaffinity chromatography. This BCCP protein was used as substrate for BirAin a discontinuous assay, and it could be shown that BCCP was biotinylateddependent on the over expression of the birA gene. Therefore it can beconcluded, that birA encodes biotin protein ligase in C. glutamicum.Moreover, birA expression was analysed in regard to growth and lysineproduction, and it could be shown, that overexpression of birA resulted in asignificant growth advantage, both, on glucose and lactate as sole carbonsource and, compared to the control strain, resulted in a higher lysine yieldon glucose.[1] www.coryneregnet.de[2] Rodionov (2007): Chem. Rev.GWP019Metabolic Engineering of E. coli HB101 for acetoneproductionA. May*, R.-J. Fischer, H. BahlDepartment of Microbiology, University of Rostock, Rostock, GermanyIn the ABE fermentation by Clostridium acetobutylicum a mixture ofsolvents is produced (acetone, butanol, ethanol). The heterologousexpression of the corresponding genes in an industrial production strain suchas Escherichia coli is one possibility to yield acetone as the only product.We established a metabolic pathway for an acetate independent acetoneformation in E. coli. The production is based on plasmid-mediatedexpression of thiolase A (ThlA) and acetoacetate decarboxylase (Adc) fromClostridium acetobutylicum in combination with YbgC from Haemophilusinfluenzae. YbgC showed thioesterase activity in vitro with acetoacetyl-CoAas substrate. The corresponding gene ybgc was cloned together with thlA andadc from C. acetobutylicum as an operon under control of the lac promoter.Among several strains, production of acetone up to 66 mM (3.8 g/l) could bedemonstrated in strain E. coli HB101.To increase the production of acetone, several specific genes on thechromosome of strain HB101 were knocked-out. As a first step, we chosesuch genes that code for proteins that use acetyl-CoA itself or earlierintermediates of the glycolysis as substrate. The aim was to increase theavailability of acetyl-CoA as the substrate of acetone way, so that a possiblyexcess could lead to a higher acetone production.The genes were replaced by a FRT-flanked resistance cassette, which wasremoved by a FLP-recombinase step. Resulting clones were tested foracetone production. Indeed, the ppc mutant (PEP carboxylase), the gltAmutant (citrate synthase) and the double mutant gltA/ppc (citratesynthase/PEP carboxylase) showed higher amounts of acetone. Incomparison to the HB101 strain, which produced 6.4 g/l acetone in 100 mlcultures, these strains produced 7.0 g/l (∆ppc), 9.8 g/l (∆gltA) and 9.5 g/l(∆gltA/∆ppc) acetone respectively.The biotin auxotrophic bacterium Corynebacterium glutamicum is used forlarge-scale production of amino acids. In the genome of this organism thegenes genes bioA, bioD and bioB encoding for a fragmentary biotinspektrum | Tagungsband <strong>2011</strong>
GWP020Corynebacterium glutamicum engineered as a designerbug for the production of pyruvateW. Stefan*, B. Blombach, B.J. EikmannsInstitute of Microbiology and Biotechnology, University of Ulm, Ulm,GermanyCorynebacterium glutamicum is a non-pathogenic, Gram-positive organismthat grows on a variety of substrates and is used for the production of aminoacids, e.g. L-glutamate, L-lysine and L-valine, as well as organic acids, e.g.lactic and succinic acid. The aim of the present work was to engineer C.glutamicum to produce pyruvate. The resulting strain is supposed to be usedas a platform for production strains of amino acids and other organic acidsderived from pyruvate, e.g. dicarboxylic acids of the citric acid cycle. Thesemight be used as precursors for a variety of bulk chemicals andcommercially important polymers, which are these days produced primarilyfrom petrochemicals via chemical synthetic processes.In our study we modified C. glutamicum for the production of pyruvate anddecreased formation of byproducts (e.g. amino acids). By stepwiseinactivation of the pyruvate dehydrogenase complex, the pyruvate:quinoneoxidoreductase, the L-lactate dehydrogenase and attenuation of theacetohydroxyacid synthase [AHAS] by deleting the C-terminal domain of itsregulatory subunit, efficient pyruvate production was achieved. The deletionof the genes encoding alanine aminotransferase and pyruvate:valineaminotransferase led to a strong reduction of the side product L-alanine andtogether with the attenuation of the AHAS to decreased L-valine formation(below 5 mM). Above all, we observed efficient pyruvate formation up tonearly 200 mM in shake flask experiments, with a yield of ~0.7 g pyruvateper g of glucose. The most critical step for pyruvate formation is theattenuation of the AHAS. In fed-batch fermentations with the newlyconstructed C. glutamicum strain, final pyruvate concentrations of more than500 mM have been observed. Thus, the strain represents an efficientpyruvate producer and an ideal platform for pyruvate-derived metabolites.GWP021Extension of the substrate utilization range of Ralstoniaeutropha strain H16 for mannose and glucose bymetabolic engineeringS. Sichwart*, S. Hetzler, D. Bröker, A. SteinbüchelInstitute for Molecular Microbiology and Biotechnology (IMMB),Westphalian Wilhelms-University, Münster, GermanyThe Gram-negative facultative chemolithoautotrophic bacterium Ralstoniaeutropha strain H16 is known for its narrow carbohydrate utilization rangewhich limits its use for biotechnological production of PHAs and possiblyother products from renewable resources. To broaden its substrate utilizationrange, which is for carbohydrates and related compounds limited to fructose,N-acetylglucosamine and gluconate, strain H16 was engineered to usemannose and glucose as sole carbon sources for growth. The genes for afacilitated diffusion protein (glf) from Zymomonas mobilis and for aglucokinase (glk), mannofructokinase (mak) and phosphomannose isomerase(pmi) from Escherichia coli were alone or in combination constitutivelyexpressed in R. eutropha strain H16 under control of the neokanamycin- orlac-promoter, respectively, using an episomal broad host range vector.Recombinant strains harboring pBBR1MCS-3::glf::mak::pmi orpBBR1MCS-3::glf::pmi grew on mannose, whereaspBBR1MCS-3::glf::mak and pBBR1MCS-3::glf did not confer the ability toutilize mannose as carbon source to R. eutropha. The recombinant strainharboring pBBR1MCS-3::glf::pmi exhibited slower growth on mannosethan the recombinant strain harboring pBBR1MCS-3::glf::mak::pmi. Thesedata indicated that phosphomannose isomerase is required to convertmannose-6-phosphate into fructose-6-phosphate for subsequent catabolismvia the Entner-Doudoroff pathway. In addition, all plasmids conferred to R.eutropha also the ability to grow in presence of glucose. Best growth wasobserved with a recombinant R. eutropha strain harboring plasmidpBBR1MCS-2::P nk::glk::glf. In addition, expression of the respectiveenzymes was demonstrated at the transcriptional and protein level and bymeasuring the activities of mannofructokinase (0.622 U mg -1 ± 0.063 U),phosphomannose isomerase (0.251 U mg -1 ± 0.017 U), and glucokinase(0.518 U mg -1 ± 0.040 U). Cells of recombinant strains of R. eutrophasynthesized poly(3-hydroxybutyrate) to about 65% - 67% (wt/wt) of cell drymass in presence of 1% (wt/vol) glucose or mannose as sole carbon sources.GWP022Conversion of 3-sulfinopropinonyl-CoA, a structuralanalogue of succinyl-CoA, to propionyl-CoA in Advenellamimigardefordensis strain DPN7 TM. Schürmann*, A. Deters, J.H. Wübbeler, A. SteinbüchelInstitute for Molecular Microbiology and Biotechnology (IMMB),Westphalian Wilhelms-University, Münster, GermanyDegradation of 3,3-dithiodipropionate (DTDP), a sulfur containing precursorsubstrate for polythioester production, was investigated in Advenellamimigardefordensis strain DPN7 T . This bacterium was isolated due to itsability to utilize DTDP as a sole source of carbon and energy [1]. DTDP isinitially cleaved by a disulfide-reductase (LpdA) into two molecules of 3-mercaptopropionic acid [2]. In the next step a thiol dioxygenase (Mdo)catalyzes the oxidation to 3-sulfinopropionate (3-SP), which is thereafteractivated to the corresponding 3-SP-CoA thioester by a succinyl-CoAsynthetase (SCS) [3, 4]. A Tn5::mob-induced mutant, defective in growth onDTDP and 3-SP, was genotypically characterized. The transposon insertionwas mapped in an open reading frame with highest homologies to an acyl-CoA dehydrogenase (CaiA) from Verminephrobacter eiseniae strain EF01-2(63 % identical amino acids). A defined ΔcaiA mutant verified the observedeffects in the Tn5::mob induced mutant. For enzymatic studies CaiA washeterologously expressed in E. coli using pET23a::caiA. The purifiedenzyme catalyzed the conversion of 3-SP-CoA to propionyl-CoA. It istherefore a novel reaction for the abstraction of sulfur. FAD, as a putativecofactor of CaiA, has been isolated from the purified protein and its identitywas confirmed via HPLC-ESI-MS.[1] Wübbeler, J.H. et al (2006): Int J Syst Evol Microbiol. 56: 1305-10.[2] Wübbeler, J.H. et al (2010): Appl Environ Microbiol. 76:7023-8.[3] Bruland, N. et al (2009): J Biol Chem. 284:660-72.[4] Schürmann, M. et al. Submitted.GWP023Enhancing the Biodesulfurization of Dibenzothiophenewith Rhodococcus erythropolis IGTS8 using SyntheticSurfactantsW. El Moslimany*, B. Al-Nasser, R. HamzahBiotechnology, Arabian Gulf University, Manamah, BahrainBackground: Combustion of fossil fuels releases hazardous emissions likeSO 2 into the environment. This is due to the presence of high amounts oforganosulfur compounds such as dibenzothiophene (DBT) and its alkylatedderivatives. Strict environmental regulations imply that the amount of sulfurin transportation fuels be drastically reduced. The petroleum industry relieson hydrodesulfurization to remove sulfur from petroleum -derived fuels.This technique is costly, not completely efficient, and even environmentallypolluting. Biodesulfurization with dedicated microorganisms has beenproposed as an environmentally friendly and cost effective alternative orcomplement. However, large scale application of microbial desulfurizationis limited by the low biocatalytic efficacy.Aim of the work: In this work, Rhodococcus erythropolis IGTS8 wasadopted to study the influence of some synthetic surfactants on thebiodesulfurization activity using DBT as a model substrate.Methods: All experiments were conducted in mineral salts mediumcontaining glucose and dibenzothiophene as a sole sulfur source in thepresence or absence of surfactants. Cell-free culture supernatants wereanalyzed by HPLC to monitor the consumption of DPT and the formation ofthe dead end product 2-hydroxybiphenyl.Results: Among the tested surfactants, SDS was chosen to complete thestudies because it did not inhibit the growth of the IGTS8 strain. The IGTS8strain grew on glucose in the presence of SDS as a sole sulfur source after alag period of 3 days. However, The IGTS8 strain was not able to utilize SDSas a sole carbon source even after 2 weeks of incubation. The data alsoshowed that the biodesulfurization enzymes of the 4S pathway are functionalin the presence of different concentrations of SDS. Cultures growing onDBT in the presence of 1000 ppm of SDS transformed DBT faster thancontrol cultures lacking SDS.Conclusion: The surfactant SDS improved the biodesulfurization activity ofthe IGTS8 strain. The potential role of SDS in the biodesulfurization processappears to be promoting the solubility of the hydrophobic substrate, DBT, inwater. This would improve the mass transfer and, consequently, lead toenhanced biodesulfurization rates.[1] Feng, J. et al (2006): The surfactant tween 80 enhances biodesulfurization. Appl. Environ.Microbiol. 72:7390-7393.spektrum | Tagungsband <strong>2011</strong>
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12 GENERAL INFORMATION · SPONSORS
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14 GENERAL INFORMATIONEinladung zur
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16 AUS DEN FACHGRUPPEN DER VAAMFach
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22 INSTITUTSPORTRAITMicrobiology in
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INSTITUTSPORTRAITGrundlagen der Mik
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26 CONFERENCE PROGRAMME | OVERVIEWT
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28 CONFERENCE PROGRAMMECONFERENCE P
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32 SPECIAL GROUPSACTIVITIES OF THE
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ISV01The final meters to the tapH.-
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ISV11No abstract submitted!ISV12Mon
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ISV22Applying ecological principles
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ISV31Fatty acid synthesis in fungal
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AMV008Structure and function of the
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pathway determination in digesters
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nearly the same growth rate as the
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the corresponding cell extracts. Th
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AMP035Diversity and Distribution of
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[1] Kennelly, P. J. (2003): Biochem
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(TPM-1), a subunit of the Arp2/3 co
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in all directions, generating a sha
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localization of cell end markers [1
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possibility that the transcription
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Bacillus subtilis. BiFC experiments
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published software package ARCIMBOL
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EMV005Anaerobic oxidation of methan
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ease of use for each method are dis
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ecycles organic compounds might be
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EMP009Isotope fractionation of nitr
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fluxes via plant into rhizosphere a
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nutraceutical, and sterile manufact
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the environment and to human health
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EMP049Identification and characteri
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and at least 99.5% of their respect
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OTP022c-type cytochromes from Geoba
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OTP037Identification of an acidic l
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[3] was investigated. The specific
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264 AUTORENBreinig, F.FBP010FBP023B
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266 AUTORENGoerke, C.Goesmann, A.Go
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268 AUTORENKlaus, T.Klebanoff, S. J
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270 AUTORENMüller, Al.Müller, Ane
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272 AUTORENScherlach, K.Scheunemann
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274 AUTORENWagner, J.Wagner, N.Wahl
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276 PERSONALIA AUS DER MIKROBIOLOGI
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278 PROMOTIONEN 2010Lars Schreiber:
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280 PROMOTIONEN 2010Universität Je
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282 PROMOTIONEN 2010Universität Ro
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Die EINE, auf dieSie gewartet haben