[2] Wennerhold, J. et al (2005): The AraC-type regulator RipA represses aconitase and other ironproteins from Corynebacterium under iron limitation and is itself repressed by DtxR. J Biol Chem,280(49):40500-40508.[3] Krug, A. et al (2005): Identification of AcnR, a TetR-type repressor of the aconitase gene acn inCorynebacterium glutamicum. J Biol Chem, 280(1):585-595.[4] Emer, D. et al (2009): Complex expression control of the Corynebacterium glutamicum aconitasegene: Identification of RamA as a third transcriptional regulator besides AcnR and RipA. JBiotechnol, 140(1-2):92-98.[5] Han, S.O. et al (2008): Effect of carbon source availability and growth phase on expression ofCorynebacterium glutamicum genes involved in the tricarboxylic acid cycle and glyoxylate bypass.Microbiology, 154:3073-3083.SRP008Anisin1, a defensin-like protein in Aspergillus nidulans,senses oxidative stress and balances asexual developmentA. Eigentler* 1 , I. Pócsi 2 , F. Marx-Ladurner 11 Innsbruck Biocenter, Division of Molecular Biology, Innsbruck MedicalUniversity, Innsbruck, Austria2 Faculty of Science and Technology, Department of MicrobialBiotechnology and Cell Biology, University of Debrecen, Debrecen,HungaryIn the genome of A. nidulans a defensin-like protein, Anisin1, was annotatedthat exhibits 51% amino acid identity to the mosquito Aedes (Ae.) aegyptidefensin AaDefA1. Although defensins are widely distributed in nature andtheir function in higher eukaryotes is well characterized, no studies exist sofar on defensins that originate from filamentous ascomycetes. We, therefore,started to characterize the Anisin1 encoding gene in A. nidulans. Expressionstudies in submers cultures indicated that elevated levels of intracellularreactive oxygen species (ROS) triggered the anisin1 expression. We usedspecific mutants of the histidine-to-aspartate signal transduction pathway toshow that anisin1 expression was strongly induced in DsrrA, which suffersfrom a defect to detoxify ROS. In contrast, anisin1 was repressed in A.nidulans strains that efficiently respond to oxidative stress. In A. nidulanswild-type surface cultures, however, the anisin1 transcription correlated withthat of the central regulator for asexual development, brlA, and with catB.This co-regulation was deregulated in DsrrA which might explain thesporulation defect in this mutant. The phenotype analysis of an anisin1deletion mutant revealed an increased oxidative stress sensitivity, a defect inmitospore development and lower conidial counts at 42°C compared to thewild-type. Taken together, our results suggest that in A. nidulans anisin1plays an important role in sensing oxidative stress, in balancingconidiogenesis and in supporting thermotolerance during asexualdevelopment. In analogy to a multiple function of defensins in highereukaryotes, Anisin1 could therefore contribute to the fitness of A. nidulansunder unfavourable growth conditions.SRP009Repair potential in natural drinking water biofilms afterwater treatmentC. Jungfer*, J. Varela Villarreal, K. Brändle, U. Obst, T. SchwartzInstitute of Functional Interphases (IFG), <strong>Karlsruhe</strong> Institute of Technology(KIT), Eggenstein-Leopoldshafen, GermanyBiofilms are present in drinking water distribution systems despite watertreatment and disinfection at waterworks. They are a possible niche forhygienic relevant bacteria, and therefore a main concern for water industries.Up to now knowledge about survival strategies of bacteria during theirregeneration process in biofilms after disinfection treatments has beenlimited. To get a deeper understanding of this problem, biofilms of groundwater and surface water were investigated in different waterworks.In each waterworks the same pilot scale, built up with different standardpipe materials, was used to simulate a household water distribution system.The water that flowed through the pilot scale was exposed to disinfectionmethods such as UV and chlorine dioxide. Three month old biofilms werecompared using RNA and DNA based methods.When stress markers on RNA level were investigated, UV disinfection wasfound to be responsible for the up-regulation of recA-mediated dark repair innatural biofilms. The highest recA induction in biofilms was associated withcopper, confirming previous investigations from other waterworks. No oronly low recA expression was found in biofilms gained from the waterworksin which drinking water was not disinfected or treated with ClO 2.The total amount of bacteria present in the biofilms did not depend on thedifferent materials or disinfection processes. But DGGE analysis showed asignificant shift in the bacterial population when different materials anddisinfection treatments were used, showing e.g. an interesting speciesselection when grown on copper.SRP010Analysis of antimicrobial peptides, their use for biofilmprotection and the general stress response in fungiB. Gutt* 1 , J. Zoller 1 , A. Rieder 2 , T. Schwartz 2 , C. Bollschweiler 3 , R. Fischer 11 Institute for Applied Biosciences, <strong>Karlsruhe</strong> Institue of Technology (KIT),<strong>Karlsruhe</strong>, Germany2 Institute of Functional Interfaces, <strong>Karlsruhe</strong> Institute of Technology (KIT),<strong>Karlsruhe</strong>, Germany3 BASF SE, Ludwigshafen, GermanyMicrobial biofilms are ubiquitously found and the chosen life form of mostof the microorganisms. Bacteria, fungi but also algae and protozoa benefitsymbiotically from each other, while they are surrounded by an extracellularmatrix. Some of the biofilms are unwanted, as they cause disease or destroytechnical systems. To prevent biofilm formation on surfaces, we constructedmodified fungal hydrophobins fused to antimicrobial peptides.Hydrophobins are small proteins, which self assemble at any hydrophilichydrophobicinterface into extremely stable amphipathic monolayers.Cationic antimicrobial peptides (AMPs) are only 9 to 50 amino acids in sizeand are proven to be active against bacteria and even against yeasts andfilamentous fungi [1]. They are an alternative to antibiotics and do not affecthuman cells. Different cationic antimicrobial peptides (AMPs) were fused toA. Nidulans hydrophobin DewA and expressed in E. coli.A second aspect is the analysis of the general stress response in A. nidulanswhen these fungi are exposed to those AMPs. To this end, we are currentlyanalyzing different His-Asp phosphorelay signaling systems (also known astwo component systems), which consist of response regulators (rr) andhistidine kinases (hk). A. nidulans has 4 rrs and 15 hks [2], for all of whichwe have corresponding deletion strains, which will be analyzed for theirsensitivity against the cationic antimicrobial peptides.[1] D. Mania et al (2010): Screening for Antifungal Peptides and Their Modes of Action inAspergillus nidulans. Appl. Environ. Microbiol. 76: 7102-7108.[2] D. Hagiwara et al (2007): The SskA and SrrA Response Regulators Are Implicated in OxidativeStress Responses of Hyphae and Asexual Spores in the Phosphorelay Signaling Network ofAspergillus nidulans. Biosci. Biotechnol. Biochem. 71: 1003-1014.SRP011Iron-binding properties of the redox sensor protein HbpSof the three-component system HbpS-SenS-SenR fromStreptomyces reticuliI. Wedderhoff*, H. Schrempf, D. Ortiz de Orué LucanaApplied Genetics of Microorganisms, University of Osnabrueck,Osnabrueck, GermanyThe novel three-component signalling system HbpS-SenS-SenR from thecellulose degrader Streptomyces reticuli has been reported as an example ofa redox sensing pathway in bacteria. This system senses redox stress signalsin form of toxic concentrations of hemin, iron ions or other redox-activecompounds and regulates genes involved in oxidative stress response [1].During these processes, the extracellular oligomer-forming protein HbpSacts in concert with the two-component system SenS-SenR. Moreover,heme-binding and heme-degradation as well as iron-binding properties ofHbpS have been shown to play an important role in the signalling cascade[2,3].Recently, iron-binding motifs (D/E-X-X-E) have been identified in HbpS[3]. In order to get more insights as to their functional role, a set of mutantproteins will be generated and analysed in vitro and in vivo. Furthermore, byusing of the 3D crystal structure of HbpS the localization of these motifswill be addressed. Homologues to HbpS exist in a number of Gram-positiveand Gram-negative bacteria. Based on the structure of HbpS, modelling oftheir structure will be pursued. The obtained results will be discussed inframe of this presentation.[1] Ortiz de Orué Lucana, D. and M.R. Groves (2009): The three-component signalling system HbpS-SenS-SenR as an example of a redox sensing pathway in bacteria. Amino Acids, 37:479-486.[2] Ortiz de Orué Lucana, D. et al (2009): The oligomeric assembly of the novel haem degradingprotein HbpS is essential for interaction with its cognate two-component sensor kinase. J Mol Biol,386: 1108-1122.[3] Ortiz de Orué Lucana, D. et al (2010): Iron-mediated oxidation induces conformational changeswithin the redox-sensing protein HbpS. J Biol Chem, 285: 28086-28096.spektrum | Tagungsband <strong>2011</strong>
SRP012A new facet in the adaptation of Bacillus subtilis to highsalinity: The cell wall hydrolase YqiIK. Fischer*, E. BremerDepartment of Biology, Philipps-University, Marburg, GermanyThe habitat of the Gram-positive bacterium Bacillus subtilis is the upperlayer of the soil. In this environment, B. subtilis has to cope with a multitudeof environmental challenges. Increases in the salinity of the soil severelyimpair growth of B. subtilis and trigger adaptive countermeasures of the cellthat are aimed at maintaining proper hydration of the cytoplasm and turgor[1]. Genome-wide transcriptional profiling studies of salt-stressed cellsrevealed novel aspects of the acclimatization of B. subtilis to high salinityenvironments [2, 3]. This included the up-regulation of genes that encodecell-wall modifying enzymes, suggesting that alterations in the cell wall aretaking place when B. subtilis cells are exposed to high salinity surroundings.We observed a drastic change in the morphology of B. subtilis cells thatwere grown in a high salinity minimal medium, indicating a re-arrangementof the cell wall peptidoglycan. To modulate the architecture of the cell wall,B. subtilis possesses various hydrolases [4]. Among them is a cell wallhydrolase homologue YqiI protein, whose structural gene was osmoticallyinducible. YqiI is a new cell wall hydrolytic enzyme that possesses anamidase-3 domain (Pfam data base), a domain that is typically found in N-acetylmuramoyl-L-alanine amidases. However, YqiI lacks the characteristiccell wall binding domain of these hydrolases. RT-PCR allowed us todemonstrate the yqiI gene is part of an operon: yqiH-yqiI-yqiK. Via Primerextension analysis we identified an osmotically regulated and SigAdependentpromoter located upstream of this operon. Reporter gene fusion(yqiI-treA) revealed that the yqiI gene is induced by high salinity but only ifthe salt concentration of the growth medium exceeds 0.7 M NaCl.Furthermore, we observed a strong induction of the transcription of the yqiItreAreporter gene fusion in cultures that had entered the decay phase. Takentogether, our data suggest that the YqiI hydrophilic cell wall amidase servesan important function in B. subtilis cells that are exposed to high salinity andin cells that are dying. Hence, the modification of the cell wall in response tothe osmotic changes of the environment appears to be a new facet in theosmo acclimatization process of B. subtilis.[1] Bremer, E. (2001): In: Bacillus subtilis and its closest relatives: from genes to cells. (Ed.: A. L.Sonnenshein, R. M. Losick and J. A. Hoch) American Society for Microbiology. ASM Press,Washington D. C.; p. 385-391.[2] Steil, L. et al (2003): J. Bacteriol.; 185:6358-6370.[3] Hahne H. et al (2010): J. Bacteriol. 192:870-882.[4] Smith, T.J. et al (2000): Microbiology. 146:249-62.SRP013Proline biosynthesis in Bacillus subtilis: by-passing of theProA-bottleneckA. Zaprasis* 1 , G. Wünsche 1 , T. Hoffmann 1 , L. Weidinger 2 , J. Stülke 2 ,E. Bremer 11 Department of Microbiology, Philipps-University, Marburg, Germany2 Department of General Microbiology, Georg-August-University,Göttingen, GermanyIn its soil habitat, Bacillus subtilis is exposed to high salinity conditions dueto dessication. Its major osmotic stress response relies on the synthesis of thecompatible solute proline. B. subtilis possess two pathways for prolineproduction: (1) anabolic proline biosynthesis is mediated by the ProB-ProA-ProI enzymes and (2) osmoregulatory proline biosynthesis is mediated byProJ-ProA-ProH enzymes. Hence, the proA-encoded γ-glutamyl-phosphatereductaseinterlinks both proline biosyntetic routes.We found that a proBA deletion strain was still able to form micro-colonieson minimal agar plates lacking proline. An additional mutation in rocD wasrequired to create a tight Pro-auxtotroph. RocD is an enzyme involved inarginine degradation and produces the same reaction product as the ProAenzyme: γ-glutamyl-semialdehyde. We detected faster-growing Pro + -suppressor mutants in the proBA deletion background. The geneticalterations in these suppressors were genetically mapped to the rocRrocDEFregion. RocR is an activator of the expression of the rocDEFoperon. Upon inducer binding (e.g. arginine or proline), RocR acts inconcert with the alterantive transcription factor SigL to induce rocDEFtranscription from a -12 -24 type promotor. Four of the Pro + -suppressorscarried single amino acid substitutions in RocR and in all likelyhood lead toinducer independent RocR variants.The rocDEF regulatory region carries a cryptic SigA-type promotor thatlacks the so-called „invariant T” residue in a putative -10 region. Six of thestudied Pro + -suppressors carried single base-pair insertions that create anovel -10 region positioned with an appropriate spacing to a typical -35sequence. Hence, these types of mutations activate cryptic SigA-typepromotors and thereby allow rocDEF transcription even in the absence of aninducer for the RocR activator.Taken together, the Pro + -suppressor mutants genetically by-passe the proAdeletion by allowing the RocD catalyzed synthesis of γ-glutamylsemialdehydethat then can be further converted via ProI or ProH to proline.Our studies thus revealed an interesting physiological connection betweenthe degradation of newly synthesized arginine and the biosynthesis ofproline in B. subtilis.Funding for this study was provided by the BMBF via the BaCell-SysMO2consortium.SRP014Activation of RpoE by ChrR-proteolysis in thephotooxidative stress response of RhodobactersphaeroidesA.M. Nuss, J. Glaeser, F. Adnan*, G. KlugInstitute for Micro- and Molecular Biology, Justus-Liebig-University,Giessen, GermanySinglet oxygen can be generated in the presence of photosynthetic pigmentsand is toxic as it leads to the damage of cellular macromolecules. Thereforephotosynthetic organisms have to mount an adaptive response to thisphotooxidative stress. One major player of the photooxidative stressresponse in Rhodobacter sphaeroides is the alternative sigma factor RpoE,which is inactivated under non-stress conditions by its cognate anti-sigmafactor ChrR. In this study we present data on RpoE and ChrR levels in vivo.We demonstrate that RpoE is activated by rapid proteolysis of ChrR uponexposure to singlet oxygen as well as organic peroxide. Specifically undersinglet oxygen stress ChrR proteolysis is triggered by RSP_1090, a proteinto which only a putative function was assigned so far. The specificinvolvement of RSP_1090 in ChrR proteolysis under singlet oxygen stressindicates that the response to singlet oxygen and organic peroxide istransmitted in part by different mediators. Based on our results we provide amodel for RpoE activation in R. sphaeroides.SRP015Physiological role of rhomboid proteases inCorynebacterium glutamicumA. Lünenschloß*, A. PoetschDepartment of Plant Biochemistry, Ruhr-University, Bochum, GermanyRhomboid proteases are intramembrane proteases and belong to the class ofserine proteases. In contrast to other intramembrane proteases, they differfunctionally by releasing their cleavage products to the periplasm, ratherthan to the cytosol [1]. Rhomboids are found in eukaryotes and prokaryotes.While eukaryotic rhomboid proteases are known to participate in signaltransduction in D. melanogaster or the host invasion by parasites, thegeneral function of these proteases in prokaryotes remains still elusive. Sofar only for P. stuartii an involvement of rhomboids in generating a cellcommunication signal is known [2].For our model organism C. glutamicum two rhomboid proteases namedCg0049 and Cg2767 are predicted. Apparently, the two rhomboids aredifferently regulated, because previous work revealed an increase of Cg2767after heat stress, whereas Cg0049 was not detectable. To ascertain thefunction of Cg2767 during heat stress response and to find naturalsubstrates, a proteomic approach using LC-ESI-MS/MS technology usingthe wild type and a cg2767 deletion mutant was performed. Preliminary dataindicate that before heat stress as well as after stress conditions someproteins are differently regulated in the cg2767 deletion mutant in contrast tothe wild type. Interestingly, about 20 proteins were exclusively identified inthe wild type or the deletion mutant independent of temperature conditions.In contrast some proteins seem to be particularly affected by an increasedexpression of Cg2767, as about 10 proteins in the mutant or the wild typewere only detected after heat stress. To put these data on a solid statisticalbasis further mass spectrometric investigations are in process. To elucidate,if the identified proteins are directly or indirectly regulated by Cg2767biochemical assays are carried out.[1] Urban, S. (2006): Rhomboid proteins: conserved membrane proteases with divergent biologicalfunctions. Genes Dev. 20(22): p. 3054-68.[2] Stevenson, L.G. et al (2007): Rhomboid protease AarA mediates quorum-sensing in Providenciastuartii by activating TatA of the twin-arginine translocase. Proc Natl Acad Sci. 104(3): p. 1003-8.spektrum | Tagungsband <strong>2011</strong>
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3Vereinigung für Allgemeine und An
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8 GENERAL INFORMATIONGeneral Inform
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12 GENERAL INFORMATION · SPONSORS
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14 GENERAL INFORMATIONEinladung zur
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22 INSTITUTSPORTRAITMicrobiology in
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INSTITUTSPORTRAITGrundlagen der Mik
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28 CONFERENCE PROGRAMMECONFERENCE P
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ISV01The final meters to the tapH.-
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ISV11No abstract submitted!ISV12Mon
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ISV22Applying ecological principles
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ISV31Fatty acid synthesis in fungal
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AMV008Structure and function of the
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pathway determination in digesters
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nearly the same growth rate as the
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the corresponding cell extracts. Th
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AMP035Diversity and Distribution of
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The gene cluster in the genome of t
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ARV004Subcellular organization and
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[1] Kennelly, P. J. (2003): Biochem
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[3] Yuzenkova. Y. and N. Zenkin (20
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(TPM-1), a subunit of the Arp2/3 co
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in all directions, generating a sha
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localization of cell end markers [1
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By the use of their C-terminal doma
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possibility that the transcription
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Bacillus subtilis. BiFC experiments
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published software package ARCIMBOL
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EMV005Anaerobic oxidation of methan
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esistance exists as a continuum bet
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ease of use for each method are dis
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ecycles organic compounds might be
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EMP009Isotope fractionation of nitr
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fluxes via plant into rhizosphere a
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nutraceutical, and sterile manufact
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the environment and to human health
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EMP049Identification and characteri
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EMP058Functional diversity of micro
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EMP066Nutritional physiology of Sar
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acids, indicating that pyruvate is
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[1]. Interestingly, the locus locat
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mobilized via leaching processes dr
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Results: The change from heterotrop
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favorable environment for degrading
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for several years. Thus, microbiall
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species of marine macroalgae of the
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FBV003Molecular and chemical charac
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interaction leads to the specific a
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There are several polyketide syntha
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[2] Steffen, W. et al. (2010): Orga
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three F-box proteins Fbx15, Fbx23 a
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orange juice industry and its utili
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FBP035Activation of a silent second
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lignocellulose and the secretion of
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about 600 S. aureus proteins from 3
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FGP011Functional genome analysis of
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FMV001Influence of osmotic and pH s
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microbiological growth inhibition t
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Results: Out of 210 samples of raw
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FMP017Prevalence and pathogenicity
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hyperthermophilic D-arabitol dehydr
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GWV012Autotrophic Production of Sta
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EPS matrix showed that it consists
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enzyme was purified via metal ion a
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GWP016O-demethylenation catalyzed b
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finally aim at the inactivation of
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Results: 4 of 9 parent strains were
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GWP047Production of microbial biosu
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Based on these foregoing works we h
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function, activity, influence on gl
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selected phyllosphere bacteria was
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groups. Multiple isolates were avai
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Dinoroseobacter shibae for our knoc
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Here, we present a comparative prot
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MPV009Connecting cell cycle to path
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MPV018Functional characterisation o
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dependent polar flagellum. The torq
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(ciprofloxacin, gentamicin, sulfame
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MPP023GliT a novel thiol oxidase -
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that can confer cell wall attachmen
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MPP040Influence of increases soil t
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about 600 bacterial proteins from o
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NTP003Resolution of natural microbi
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an un-inoculated reference cell, pr
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NTP019Identification and metabolic
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- Page 278 and 279: 278 PROMOTIONEN 2010Lars Schreiber:
- Page 280 and 281: 280 PROMOTIONEN 2010Universität Je
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