published software package ARCIMBOLDO [3], we succeeded to solve thestructure by this de novo approach (Dayté Rodriguez, Isabel Usón-Finkenzeller, Instituto di Biología Molecular de Barcelona, Barcelona,Spain). In the crystal Cmi forms a dimer that is interlinked by a disulfidebridge. It is a highly charged protein with a surplus of negative chargespresumably responsible for interaction with Cma which contains a cluster ofpositive charges.[1] Gross, P., and V. Braun (1996): Mol. Gen. Genet. 251, 388-396.[2] Hullmann, J. et al (2008): Mol. Microbiol. 69, 926-937.[3] Rodríguez, D.D. et al (2009): Nature Meth. 6, 651-653.CBP040Dissecting the role of the seven chitin synthases ofNeurospora crassa in apical growth and septumformationR.A. Fajardo-Somera* 1 , R.W. Roberson 2 , S. Bartnicki-Garcia 1 ,M. Riquelme 11 Department of Microbiology, Center for Scientific Research and HigherEducation (CICESE), Ensenada, Mexico2 School of Life Sciences, Arizona State University, Tempe, USAFungal chitin synthases (CHS) are grouped into seven classes, four of them,III, V, VI and VII being exclusive of filamentous fungi. CHS classes V andVII have a myosin-like motor domain (MMD) at their amino terminus.Previous studies in Neurospora crassa showed that CHS-1, CHS-3, andCHS-6 tagged with GFP or mCherry accumulated at the core of the Spk, andalso at nascent septa. We endogenously tagged with gfp the remaining chitinsynthases genes, namely chs-2 (NCU05239.3), chs-4 (NCU09324.3), chs-5(NCU04352.3) and chs-7 (NCU04350.3) to study their distribution in livinghyphae of N. crassa. CHS-2, CHS-4, and CHS-7, appeared solely involvedin septum formation. As the septum ring developed, CHS-2-GFP movedcentripetally until it localized exclusively around the septal pore. CHS-5 waslocalized both at nascent septa and in the core of the Spk. We observed apartial colocalization of CHS-1-mCherry and CHS-5-GFP in the Spk. Totalinternal reflection fluorescence microscope (TIRFM) analysis revealedputative chitosomes containing CHS-5-GFP moving along wavy tracks.Collectively our results suggest that there are different populations ofchitosomes, each containing a class of CHS. Mutants with single genedeletions of chs-1, chs-3, chs-5, chs-6, or chs-7 grew slightly slower than theparental strain (FGSC#9718); only Δchs-6 displayed a marked reduction ingrowth. Both Δchs-5 and Δchs-7 strains produced less aerial hyphae andconidia. Currently, we are analyzing CHS activity and chitin content in allthe Knock Out mutant strains to determine the relative importance of eachCHS in cell wall biosynthesis.CBP041Neurosporacrassa class III chitin synthase 1 (CHS-1):subcellular distribution, vesicular trafficking andcytoskeleton associationsE. Sanchez-Leon* 1 , J. Verdin 1 , R.W. Roberson 2 , M. Freitag 3 , S. Bartnicki-Garcia 1 , M. Riquelme 11 Department of Microbiology, Center for Scientific Research and HigherEducation (CICESE), Ensenada, Mexico2 School of Life Sciences, Arizona State University, Tempe, USA3 Department of Biochemistry and Biophysics, Center for Genome Researchand Biocomputing, Oregon State University, Corvallis, USAApical growth in filamentous fungi is attained through different coordinatedcellular mechanisms that include cell polarity establishment andmaintenance. For cell wall expansion to occur at apical regions of growinghyphae, the orchestrated delivery of enzymes involved in carbohydratesynthesis is extremely important. In this study,by using different liveimaging techniques, we found that chitin synthase 1 (CHS-1), one of theseven putative chitin synthase of Neurosporacrassa, localizes at theSpitzenkörper (Spk) core, the apical cell surface and transiently toconstricting rings during septum development. Hyphae of heterokaryonstrains expressing CHS-1-GFP and CHS-3-GFP or CHS-6-GFP, exhibitedpartial colocalization of the three different chitin synthases, suggesting thateach CHS is contained in distinct chitosomal compartments. Total InternalReflection Microscopy (TIRFM) allowed us to observe the anterograde andretrograde traffic of rapidly moving CHS-1-GFP vesicles, some of themconverging at the Spk. The differential localization of CHS-1-GFP and GS-1-mChFP at the Spk, is the first evidence in living hyphaethat both proteinsare contained in different populations of vesicles, as predicted from earliertransmission electron micrographs. Using cytoskeleton inhibitors, weconcluded that microtubules are not essential for CHS-1 delivery to the Spkor nascent septa, whereas actin is necessary for the correct accumulation ofCHS-1 to the Spk.CBP042The morphogene AmiC2 is pivotal for multicellulardevelopment in the cyanobacterium Nostoc punctiformeJ. Lehner 1 , Y. Zhang 2 , S. Berendt 1 , T.M. Rasse 2 , K. Forchhammer 1 ,I. Maldener* 11 Institute for Microbiology and Infection Medicine, Eberhard-Karls-University, Tübingen, Germany2 Junior Research Group Synaptic Plasticity, Hertie Institute for ClinicalBrain Research, Eberhard-Karls-University, Tübingen, GermanyFilamentous cyanobacteria of the order Nostocales are primordialmulticellular organisms, a property widely considered unique to eukaryotes.Their filaments are composed of hundreds of mutually dependent vegetativecells and regularly spaced N 2-fixing heterocysts, exchanging metabolites andsignaling molecules. Furthermore, they may differentiate specialized sporelikecells and motile filaments. However, the structural basis for cellularcommunication within the filament remained elusive. Here we present thatmutation of a single gene, encoding cell-wall amidase AmiC2, completelychanges the morphology and abrogates cell differentiation and intercellularcommunication. Ultrastructural analysis revealed for the first time acontiguous peptidoglycan sacculus with individual cells connected by asingle-layered septal cross-wall. The mutant forms irregular clusters oftwisted cells connected by aberrant septa. Rapid intercellular moleculeexchange takes place in wild-type filaments, but is completely abolished inthe mutant, and this blockage obstructs any cell-differentiation, indicating afundamental importance of intercellular communication for celldifferentiationin Nostoc. AmiC2-GFP localizes in the cell wall with a focusin the cross walls of dividing cells, implying that AmiC2 processes thenewly synthesized septum into a functional cell-cell communicationstructure during cell division. AmiC2 thus can be considered as a novelmorphogene required for cell-cell communication, cellular development andmulticellularity.EMV001Anaerobic formate- and CO 2 -assimilating prokaryotictaxa in a methane-emitting fen soilS. Hunger*, O. Schmidt, M. Hilgarth, M.A. Horn, S. Kolb, H.L. DrakeDepartment of Ecological Microbiology, University of Bayreuth, Bayreuth,GermanyNatural wetlands such as fens and bogs contribute up to approximately 40%of the global biogenic emission of methane. Biopolymers in wetland soilsare anaerobically degraded via intermediary events that terminate in theemission of methane (i.e., ‘intermediary ecosystem metabolism’). Formateand CO 2 (together with H 2) are precursors of methanogenesis and have beenobserved to stimulate methanogenesis in anoxic microcosms of soil from theregional fen Schlöppnerbrunnen. However, active formate- and CO 2-utilizing methanogens of the fen remain unresolved. Active methanogens inanoxic fen soil microcosms were evaluated by stable isotobe probing ofmcrA/mrtA (encode for the alpha-subunit of methyl-CoM reductases I andII) and archaeal 16S rRNA genes. Bacterial taxa were also evaluated.Anoxic fen soil microcosms were incubated in the dark and periodicallypulsed with low concentrations of either [ 13 C]-formate or 13 CO 2. Theproduction of methane was stimulated by formate and CO 2; in contrast, onlyformate stimulated acetogenesis. 411 mcrA/mrtA sequences and 306archaeal 16S rRNA gene sequences were analyzed. 12 family-level 16SrRNA archaeal genotypes were detected, 7 of which had no isolated culturedrepresentatives. Methanocellaceae and Methanobacteriaceae were mainlylabeled by [ 13 C]-formate, whereas Methanosarcinaceae were mainly labeledby 13 CO 2, suggesting that formate-linked methanogenesis was mostlycatalyzed by fen soil-derived Methanocellaceae and Methanobacteriaceae,whereas CO 2-linked methanogenesis was mostly catalyzed by fen soilderivedMethanosarcinaceae. In total, 58 bacterial 16S rRNA family-levelgenotypes and 15 species-level fhs (encodes for formyltetrahydrofolatesynthetase) genotypes were detected, of which 29 of the bacterial 16S rRNAgenotypes and all 15 fhs genotypes were defined as novel. Two of the fhsgenotypes were affiliated with the acetogenic genera Sporomusa andMoorella. The collective results reinforce the likelihood thatspektrum | Tagungsband <strong>2011</strong>
Methanocellaceae-, Methanobacteriaceae-, and Methanosarcinaceaerelatedtaxa are integrated to the ‘intermediary ecosystem metabolism’ andthe emission of methane in the fen Schlöppnerbrunnen.EMV002LOHAFEX - Investigation of the bacterial community inan iron fertilization experimentS. Thiele* 1 , B. Fuchs 1 , V. Smetacek 2 , K. Altendorf 3 , R. Amann 11 Department of Molecular Biology, Max Planck Institute for MarineMicrobiology, Bremen, Germany2 Research Group Biosciences, Alfred Wegener Institute, Bremerhaven,Germany3 Faculty of Biology and Chemistry, Department of Microbiology, Universityof Osnabrück, Osnabrück, GermanyAccording to the iron hypothesis of J. Martin, vast parts of the ocean arenutrient rich but iron limited. Therefore, fertilization of these areas with ironsulfate, in order to create algae blooms, was considered as a method of CO 2sequestration. The main aim of the study was the investigation of sideeffectsof such events to the ecosystem. Here the effects on thebacterioplankton community structure are reported. Changes in thebacterioplankton community during the iron fertilization experimentLOHAFEX were investigated using Catalyzed Amplified ReporterDeposition Fluorescence In Situ Hybridization (CARD-FISH) and semiautomaticcell counting. In response to the iron fertilization an algal bloomdominated by Phaeocystis sp. was induced and closely monitored. In orderto cover the three main groups of marine bacteria Alphaproteobacteria,Gammaproteobacteria and Bacteroidetes, 9 oligonucleotide probes wereused in nested approaches. Additionally a probe for Crenarchaea was usedin order to cover the main marine archaeal clade. In addition to a monitoringof surface water at 8 time points over the 38 days of the experiment, depthprofiles for 4 chosen stations were done covering the first 500 m of depth.After the iron fertilization only a minor increase of total cell abundance wasfound in the surface layer, while thymidine and leucine uptake ratesincreased inside the fertilized patch. CARD FISH counts showed nodifferences in bacterial counts during the experiment, but a minor decreasetowards the end. Within the Bacteroidetes a decrease of abundance wasfound in the surface during the first 5 days of the experiment. Depth profilesshowed an increase of this group at 300 m depth before and at the end of theexperiment. However, the abundance of Gammaproteobacteria did notchange significantly inside the patch, whereas changes were found in thealphaproteobacterial clade. SAR11 increased during the first days of theexperiment at day 5 and decreased only after day 21. A massive grazingpressure on larger cells than SAR11 is hypothesized to cause the remarkablystable community, giving the small SAR11 the niche to increase in numbers.EMV003Active hydrocarbon-degrading sulfate-reducing bacteriaat marine gas and oil seepsS. Kleindienst* 1 , F. Musat 2 , T. Lueders 3 , F. von Netzer 3 , R. Amann 1 ,K. Knittel 11 Department of Molecular Ecology, Max Planck Institute for MarineMicrobiology, Bremen, Germany2 Department of Miciobiology, Max Planck Institute for MarineMicrobiology, Bremen, Germany3 Institute of Groundwater Ecology, Helmholtz Center Munich, Neuherberg,GermanyMarine sediments play a significant role in the global cycling of carbon andother elements. Since O 2 is rapidly depleted in the upper sediment layers,sulphate reduction (SR) is the main dissimilatory process, accounting for upto 50% of total organic matter remineralization. At gas seeps, SR is tightlycoupled to the anaerobic oxidation of methane while in sediments withnatural oil seepage methane-dependant SR drops to less than 10% of totalSR rates, indicating the degradation of other hydrocarbons in addition tomethane. Up to now several sulfate-reducing bacteria (SRB) have beendescribed to be capable of hydrocarbon degradation but their activity andabundance in situ are still largely unknown.In this study we used CARD-FISH and cDNA-based clone libraries (16SrRNA and aprA) to investigate the global distribution and abundance ofspecific SRB in diverse marine oil and gas seeps. Stable-isotope probing(SIP) was used to identify active key-players in seep sediments. In allhabitats, members of the Desulfosarcina/Desulfococcus (DSS) branch ofDeltaproteobacteria were most dominant with up to 15% of total singlecells. A major part (6%) of this group could be assigned to the seep-endemicsubgroup SEEP-SRB1. Another dominant group detected was the SEEP-SRB2 group, distantly related to Syntrophobacterales and Desulfobacteriumanilini with up to 12%.SIP experiments using butane and dodecane were performed with sedimentsfrom gas and oil seeps. Butane was rapidly degraded in incubations withAmon mud volcano sediments (gas seeps) as determined by sulfide andbutane concentrations, while in incubations with Guaymas Basin sediments(oil seeps) degradation was slow and started after a lag phase. Butanedissimilation and assimilation were confirmed by δ 13 C-DIC and -TOCanalysis, respectively. T-RFLP analysis revealed a clear labeling of differentbutane primary-consumers already within the first sampling points, whilepotential secondary consumers were found to be labeled in the latestsampling points. Active butane-degrading SRB were identified by rRNAgene sequencing. In contrast to butane incubations, dodecane experimentsshowed a slower microbial response. The identification of key hydrocarbondegradingSRB together with cultivation attempts will allow a betterunderstanding of the involved microorganisms and the carbon cycling atmarine gas and oil seeps.EMV004Enrichment of Dehalococcoides-related Chloroflexi frommarine subsurface sedimentsC. Algora* 1 , K. Wasmund 1 , C. Ridley 2 , J. Müller 1 , T.G. Ferdelman 3 ,L. Adrian 11 Institute for Isotope Biogeochemistry, Helmholtz Center for EnvironmentalResearch (UFZ), Leipzig, Germany2 Dalhousie University, Halifax, Canada3 Derpartment of Biogeochemistry, Max Planck Institute for MarineMicrobiology, Bremen, GermanyIt is estimated that the marine subsurface contains more than 90% of themicrobial biomass on Earth [1, 2] and is probably the least known ecosystemon Earth. ”Dehalococcoides-related Chloroflexi” microorganisms (DRC) area typical deep subsurface group of uncultured microorganisms from thephylum Chloroflexi which appear ubiquitous thriving in subsurfacesediments [3-5]. In this study, subsurface sediments from off the coast ofChile were used as inoculum for microcosms targeting enrichment of DRC.Their closest cultured relatives are members of Dehalococcoides spp., whichuse halogenated organic compounds as electron acceptors [6-8].Halogenated compounds are known to be naturally produced by an array ofbiological and chemical processes in the environment. Oceans are the largestsource of biologically produced halogenated organic compounds on Earth[9]. Halogenated organic compounds such as chlorinated benzenes may thusbe a potential electron acceptor for subsurface DRC. Herein we showdechlorination of 1,2,3-trichlorobenzene (80 μM; 123-TCB) to 1,3dichlorobenzene (13-DCB) by sediment microbiota in enrichment culturesfrom sediments after an incubation time of 6 months. A subsequentlytransferred enrichment culture showed complete 123-TCB dechlorinationafter 2 months of incubation. Relative to total bacterial numbers, DRCnumbers in the sediment measured by real-time PCR were low in thestarting sediment material. Real-time PCR targeting DRC showed anincrease of DRC 16S rRNA gene copy numbers from 7 x 10 2 to 2 x 10 4 aftercomplete 123-TCB dechlorination to 13-DCB in the enrichment culturewithin 2 months. This confirms the enrichment in DRC organisms eventhough the starting numbers in the sediment were low. A clone library wasproduced from 16S rDNA amplicons of DRC-specific primers, andsubsequentially sequenced. All sequences showed similarity with unculturedChloroflexi sequences retrieved from different subsurface locations.[1] Parkes et al (1994): Nature 371: 410 - 413.[2] Whitman et al (1998): PNAS 95: 6578-6583.[3] Coolen et al (2002): Science 296:2407-2410.[4] Inagaki et al (2003): Appl. Environ. Microbiol. 69:7224-7235[5] Wilms et al (2006): Env. Microbiol. 8: 709-719.[6] Maymó-Gatell et al (1997): Science 276: 1568-1571.[7] Adrian et al (2000): Nature 408: 580-583.[8] Kittelmann et al (2008): Env. Microbiol. 10: 31-46.[9] Gribble (2003): Chemosphere 52: 289-297.spektrum | Tagungsband <strong>2011</strong>
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3Vereinigung für Allgemeine und An
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8 GENERAL INFORMATIONGeneral Inform
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12 GENERAL INFORMATION · SPONSORS
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14 GENERAL INFORMATIONEinladung zur
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16 AUS DEN FACHGRUPPEN DER VAAMFach
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18 AUS DEN FACHGRUPPEN DER VAAMFach
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20 AUS DEN FACHGRUPPEN DER VAAMFach
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22 INSTITUTSPORTRAITMicrobiology in
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INSTITUTSPORTRAITGrundlagen der Mik
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28 CONFERENCE PROGRAMMECONFERENCE P
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orange juice industry and its utili
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FBP035Activation of a silent second
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lignocellulose and the secretion of
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about 600 S. aureus proteins from 3
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FGP011Functional genome analysis of
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hyperthermophilic D-arabitol dehydr
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EPS matrix showed that it consists
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enzyme was purified via metal ion a
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finally aim at the inactivation of
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function, activity, influence on gl
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groups. Multiple isolates were avai
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Dinoroseobacter shibae for our knoc
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Here, we present a comparative prot
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MPV009Connecting cell cycle to path
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dependent polar flagellum. The torq
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(ciprofloxacin, gentamicin, sulfame
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that can confer cell wall attachmen
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hemagglutinates sheep erythrocytes.
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and at least 99.5% of their respect
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a novel initiation mechanism operat
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[3] was investigated. The specific
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cations. Besides the catalase depen
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SRP016Effect of the sRNA repeat RSs
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264 AUTORENBreinig, F.FBP010FBP023B
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266 AUTORENGoerke, C.Goesmann, A.Go
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268 AUTORENKlaus, T.Klebanoff, S. J
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270 AUTORENMüller, Al.Müller, Ane
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272 AUTORENScherlach, K.Scheunemann
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274 AUTORENWagner, J.Wagner, N.Wahl
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276 PERSONALIA AUS DER MIKROBIOLOGI
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278 PROMOTIONEN 2010Lars Schreiber:
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280 PROMOTIONEN 2010Universität Je
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282 PROMOTIONEN 2010Universität Ro
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Die EINE, auf dieSie gewartet haben