ARV004Subcellular organization and energy conservation ofIgnicoccus hospitalisL. Kreuter* 1 , U. Küper 1 , T. Heimerl 2 , A. Röhl 1 , F. Mayer 1,3 , V. Müller 3 ,R. Rachel 2 , H. Huber 11 Institute for Microbiology and Archaeal Center, University of Regensburg,Regensburg, Germany2 Center for Electron Microscopy, University of Regensburg, Regensburg,Germany3 Institute for Molecular Biosciences, Goethe-University, Frankfurt amMain, GermanyIgnicoccus hospitalis is a chemolithoautotrophic Crenarchaeote that obtainsenergy from the reduction of elemental sulfur with molecular hydrogen aselectron donor (1). It is able to carry out CO 2 fixation via a new pathway,named dicarboxylate/ 4-hydroxybutylate cycle. Acetyl-CoA is the primaryacceptor molecule and is regenerated via the characteristic intermediate 4-hydroxybutyrate (2). I. hospitalis, like all identified Ignicoccus species,exhibits a unique cell architecture that differs from all other Archaea knownso far. Its cell envelope consists of two membranes enclosing a hugeintermembrane compartment (IMC) (3). In its lipid composition, the outermembrane of I. hospitalis significantly differs from the cytoplasmicmembrane, as it comprises only archaeol and its derivatives, but nocaldarchaeol. In addition, there are unique and abundant proteins only foundin the outer membrane of I. hospitalis, like the pore-forming Ihomp1.Recently, it was shown that the outer membrane contains the H 2:sulphuroxidoreductase as well as the ATP synthase. Thus, I. hospitalis is the firstorganism with an energized outer membrane and ATP synthesis within theIMC. DAPI staining and EM analyses showed that DNA and ribosomes arelocalized in the cytoplasm, leading to the conclusion that in I. hospitalisenergy conservation is separated from information processing and proteinbiosynthesis (4). In addition, we were able to demonstrate that the acetyl-CoA synthetase that activates acetate to acetyl-CoA in an ATP consumingprocess is associated to the outer membrane. This is the first energyconsumingprocess proven to take place in the intermembrane compartment.These results raise questions on other metabolic reactions that are likely tooccur in the IMC, e.g. the first steps in CO 2 fixation, and on the existence oftransporters that convey ATP from the site of its synthesis to the cytoplasmwhere DNA replication and transcription take place. The findings may alsoshed light on the nature of the intimate association between I. hospitalis andNanoarchaeum equitans (5). It is known that N. equitans receives aminoacids and lipids from its host. However, it is still unclear at present if N.equitans is able to synthesize ATP or if it obtains this form of energydirectly from I. hospitalis, too.[1] Paper W. et al (2007): Int. J. Syst. Evol. Microbiol. 57:803-808.[2] Huber H. et al (2008): PNAS 105: 7851-7856.[3] Junglas B. et al (2008): Arch. Microbiol. 190: 395-408.[4] Kueper U. et al (2010): PNAS 107: 3152-3156.[5] Jahn U. et al (2008): J. Bacteriol. 190: 1743-1750.ARV005Full speed ahead: analysis of the assembly of the archaealflagellumK. Lassak* 1 , A. Ghosh 1 , R. Wirth 2 , S.-V. Albers 11 Department of Molecular Microbiology, Max Planck Institute forTerrestrial Microbiology, Marburg, Germany2 Department of Microbiology, University of Regensburg, Regensburg,GermanyMicroorganisms move towards optimum locations and escape fromunfavorable conditions by use of motility structures like flagella.The archaeal flagellum, which is distinct from the bacterial one, was studiedintensively in Euryarchaeota. However, the crenarchaeal flagellar assemblysystem is not well understood. We study the thermoacidophilic crenarchaeonSulfolobus acidocaldarius to analyse the assembly and function of theirflagella system. Markerless in-frame deletion strains were constructed for allseven genes of the fla operon. To exclude polar effects, both at thetranscriptional and translational level, we performed q-PCRs and WesternBlots. Motility assays and electron microscopy analysis of all Δfla strainsrevealed non-motile and non-flagellated S. acidocaldarius cells. Takentogether, these results indicate the involvement of all seven genes of the flaoperon in the correct flagellar assembly.In a parallel approach pH, osmotic pressure, temperature and starvation weretested to stimulate flagellar biosynthesis and assembly. Interestingly, onlystarvation conditions induced the production of flagellar assembly proteins.Moreover, under these conditions thermo microscopy revealed highly motilecells, reaching swimming velocities up to 60 μm/s. Thus, we speculate thatthe crenarchaeal flagellum plays a role in escaping from nutrient limitedenvirons.Further experiments like pull-down assays and yeast two-hybridexperiments will elucidate Fla protein interactions. These findings will bethe basis to understand the molecular mechanism of the crenarchaealflagellar assembly system.ARV006Microorganisms, Peregrine Falcons and Cheetahs - Whois the fastest?R. Wirth*, B. HerzogInstitute for Microbiology and Archaeal Center, University of Regensburg,Regensburg, GermanyAn often asked question in Biology concerns velocity: who is the fastest?An answer to this question has to take into account the different body sizesof organisms to be compared. For this reason the term bps was introduced as‘bodies per second'; i. e. relative velocities are defined in movements ofbody size per second. By this definition man runs with ca. 5 bps, cheetahsrun with a maximum speed of 30 bps; the peregrine falcon flies at ca. 100bps and accelerates by dives into the air to a maximal 400 bps. This lattervelocity often is referred to as maximum relative speed in nature (but is notreached by active movement).Using a so-called thermomicroscope, allowing analyses at up to 95° C underanaerobic conditions we analyzed the swimming behavior ofhyperthermophilic Archaea (some bacteria were used for controls). Our dataclearly show that certain microorganisms are the fastest organisms on earth.E. coli swims with an average speed of ca. 45 μm/sec = ca. 30 bps. ForArchaea we measured the following speeds: Halobacterium salinarum: 3μm/sec = ca. 1 bps; Pyrococcus furiosus 60 μm/sec = 60 bps;Methanococcus voltae: 80 μm/sec = 80 bps; Methanocaldococcus villosus:290 μm/sec = 290 bps; Methanocaldococcus jannaschii: 380 μm/sec = 380bps. The latter two species did swim with maximal relative velocities of 470and 590 bps, respectively - they for sure, thereby extend the maximumrelative speed in nature by at least a factor of 5.Very interestingly, the swimming behavior of hyperthermophilic Archaeadiffers from that of mesophilic Bacteria. Whilst the latter swim in more orless smooth runs, the former exhibit a ‘seek and stay' behavior, which mightbe explained by the conditions they life in. Examples of those differentswimming modes will be presented.ARV007Screening and characterization of biofilm formation inhalophilic ArchaeaS. Fröls*, F. PfeiferInstitute of Microbiology and Genetics, Unviersity of Technology,Darmstadt, GermanyBiofilm formation is described for some hyperthermophilic andmethanogenic Archaea, only one example of surface adhesion is reported forhaloarchaea [1]. We developed a fluorescence-based adhesion assay toscreen and quantify this property in haloarchaea. Eight extremely halophilicHalobacterium salinarum strains, four moderately halophilic Haloferaxstrains, one haloalkaliphilic strain and eight halopsychrophilic archaea weretested. Twelve of them showed adhesion, that were categorized in fourgroups. Members of group I did not adhere (0%-10%), group II exhibited alow to moderate (>10%-30%), group III a strong (>30%-70%), and group IVa very strong ability for adhesion (>70%). The latter group contains oneAntarctic isolate and the gas vesicle producing Hbt. salinarum DSM3754,whereas the gas vesicle producing wildtype strains PHH1 and NRC-I did notadhere. Among the environmental isolates only half of them were adhesiveand adhesion could also get lost after several rounds of incubation.Biofilm producing strains cultivated on glass and plastic surfaces wereanalyzed by microscopy. Different growth parameters or variations of mediasupplements had almost no effect on biofilm formation. Biofilms of Hbt.salinarum DSM3754 and the Antarctic isolate were composed of flat celllayers with additional three-dimensional microcolonies. In contrast, biofilmsof Haloferax and Halorubrum mainly consisted of large cellular aggregatesthat loosely attached to the surface. Extracellular polymeric substances(EPS) were composed of free nucleic acids and glycoconjugates. In the caseof Hbt. salinarum DSM3754 attachment started one day after incubation.Electron microscopic studies showed that adherent cells were connected by aspektrum | Tagungsband <strong>2011</strong>
network of different cellular appendices. The microcolonies wereremarkably stable with almost 100% of viable cells after three month ofincubation.Our analysis demonstrated that the ability of adhesion is widely distributedin haloarchaea and the multicellular communities detected represent biofilmstructures.[1] Tripepi M. et al (2010): J Bacteriol.192(12): 3093-102.ARV008Assessment of the predominant methanogenic pathwaysin anaerobic digesters by the combination of moleculartechniques with the isotopic fingerprinting of theproduced biogasM. Nikolausz* 1 , R.F.H. Walter 1 , H. Sträuber 1 , J. Liebetrau 2 , T. Schmidt 2 ,S. Kleinsteuber 3 , F. Bratfisch 4 ,U.Günther 4 , H.H. Richnow 41 Department of Bioenergy, Helmholtz Center for Environmental Research -UFZ, Leipzig, Germany2 Department of Biochemical Conversion, German Biomass Research Center(DBFZ), Leipzig, Germany3 Department of Environmental Microbiology, Helmholtz Center forEnvironmental Research (UFZ) , Leipzig, Germany4 Department of Isotope Biogeochemistry, Helmholtz Center forEnvironmental Research (UFZ), Leipzig, GermanyLaboratory scale continuously stirred tank reactors were run under variousconditions using either cereal distillers grains, a by-product from bioethanolindustry, maize silage or chicken manure as substrate. In addition to thestandard process parameters the stable hydrogen and carbon isotopiccomposition of the produced biogas (methane and CO 2) was also analysed toestimate the predominant methanogenic pathways (acetotrophic vs.hydrogenotrophic). The methanogenic communities in the reactors were alsoinvestigated for their phylogenetic composition by terminal restrictionfragment length polymorphism analysis and sequencing of the mcrA genescoding methyl-coenzyme M reductase. In addition, the expression of thegene was also studied as a better indicator of the metabolic activity. Thecarbon isotopic values (δ 13 C) of methane ranged between -68‰ and -35‰.This latter value of the maize silage reactor was probably influenced by theoriginal high value (-12‰) of this C4 plant substrate. The hydrogen isotopicvalues (δD) of methane were very low (-369 to -347‰) except the samplesfrom the maize silage reactor ranging from -292‰ to -281‰. Apparentfractionation factors (α CO2-CH4) suggested a hydrogenotrophic pathway in thechicken manure reactor, while probably both pathways influenced theisotopic signal of derived methane in the other reactors.According to the molecular biological investigations the reactors weredominated by hydrogenotrophic Methanomicrobiales with Methanoculleusas the predominant genus. Sequences affiliated with acetotrophicMethanosetaceae were found only in one cereal distillers grains reactor,while sequences affiliated with Methanosarcinaceae were frequently foundrepresenting less abundant members of the methanogenic communities. AtRNA level major changes in the relative abundance of the amplifiedsequences were observed compared to the results obtained from the isolatedDNA.ARP001Toxicity of methylated Bismuth produced by intestinalmicroorganisms to Bacteroides thetaiotaomicron, adominant member of human intestinal microbiotaB. Bialek*, D. Pieper, R. Diaz-Bone, R. HenselDepartment of Microbiology, University Duisburg-Essen, Essen, GermanyBismuth compounds have significant application in medicine. Bismuthsubcitrate is applied in a triple-therapy for the treatment of Helicobacterpylori which causes chronic inflammation of the stomach and is linked tothe development of duodenal, gastric ulcers and stomach cancer. Afteringestion of bismuth subcitrate, Bi 3+ is methylated to volatiletrimethylbismuth (TMBi) by the intestinal microbiota especially bymethanoarchaea.Here we investigate the influence of TMBi produced by Methanobrevibactersmithii on growth of Bacterioides thetaiotaomicron, an important member ofthe physiological intestinal microbiota. Transfer of TMBi from headspace ofMethanobrevibacter smithii cultures to B. thetaiotaomicron cultures resultsin a significant growth inhibition of this organism. Closer investigationsshowed that the volatile TMBi rapidly decays into soluble dimethyl- andmonomethylbismuth, which cause comparable growth inhibition effects,suggesting that these derivatives are the actual agents of growth inhibition.Analyses are presented, which give insight into possible mechanismsresponsible for the toxic effects of the various methylbismuth derivatives.ARP002The fimbriae of MethanothermobacterthermoautotrophicusC. Sarbu* 1 , R. Rachel 2 , R. Wirth 11 Institute of Microbiology, University of Regensburg, Regensburg, Germany2 Institute of Microbiology and Electron Microscopy, University ofRegensburg, Regensburg, GermanyThe fimbriae of the euryarchaeon Methanothermobacterthermoautotrophicus were among the first detailed characterized archaealfimbriae. We have shown that these cell appendages with a diameter of 5 nm(mainly) consist of 16 kDa glycoprotein Mth60 and function as adhesins.For further analyses Mth60 fimbriae were enriched from the supernatant of a100 liter fermentor by PEG/NaCl induced precipitation, CsCl-gradientcentrifugation and dialysis. Electron microscopy demonstrated that soprepared fimbriae are pure and well-structured. At some ends knob-likepatterns could be detected. SDS-PAGE indicated four different proteins inthe fimbriae fractions; the prominent band at about 16 kDa correspondsMth60. The identification of the other proteins failed up to now.Reverse transcription PCR and Northern Blots revealed the main fimbringene mth60 to be part of two operons: it is co-transcribed with mth58 andmth59, a further operon comprises mth60 and mth61. It is well known frombacteria that all genes necessary for fimbriae formation are clustered.Bioinformatical investigations showed Mth59 to have a significant similarityto bacterial chaperone proteins. Chaperones play an important role infimbriae assembly (chaperone-usher-pathway) of some bacteria. Thehomology of Mth59 to bacterial chaperones might indicate that archaeal andbacterial fimbriae have a related mode of assembly. The now availableMth59 antibodies are applied in co-immunoprecipitation experiments, thusanalyzing the function of this protein. Immunolabeling of ultrathin sectionsof M. thermoautotrophicus will hopefully allow to clarify the localization ofMth59.ARP003Hot protein phosphorylation: carbon source dependentphospho-proteom mapping from Sulfolobus solfataricusP2D. Esser* 1 , T.K. Pham 2 , J. Reimann 3 , S.-V. Albers 3 , P. Wright 2 , B. Siebers 11 Department of Molecular Enzymetechnology and Biochemistry, UniversityDuisburg-Essen, Essen, Germany2 Department of Chemical and Biological Engineering, University ofSheffield, Sheffield, United Kingdom3 Max Planck Institut for Molecular Biology of Archaea, Marburg, GermanyPosttranslational modifications (PTMs) are of major interest for theregulation of cellular processes. Reversible protein phosphorylation is themain mechanism, which is applied to control the functional properties ofproteins in response to environmental stimuli [1]. In the 80’s proteinphosphorylation has been demonstrated in the third domain of life, theArchaea. However, so far only few phospho proteins were identified andfew protein kinases and protein phosphatases were investigated. A hugeprogress was achieved only recently by the determination of the completephospho-proteom of the extremhalophilic Euryarchaeon Halobacterimsalinarium, which was analyzed via MS with prior TiO 2 phospho-peptideenrichment [2].Model organism of this study is the thermoacidophilic CreanarchaeonSulfolobus solfataricus. Bioinformatic investigation revealed that S.solfataricus only harbors eukaryal protein kinases and classical twocomponent systems are absent. Until now, only little is known about proteinphosphorylation in this organism. So far, only six possible target proteinswere reported. In addition three eukaryal type serine/threonine specificprotein kinases as well as two protein phosphatases were characterized (PP1-arch1 and PTP) [1; 3]. In order to analyze the phospho-proteom of S.solfataricus in more detail, we applied a gel and enrichment free proteomeapproach by using the precursor acquisition independent from ion count(PAcIFIC) method [4]. The detailed pospho-proteom mapping with a specialfocus on the central carbohydrate metabolism (CCM) will be presented.spektrum | Tagungsband <strong>2011</strong>
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3Vereinigung für Allgemeine und An
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8 GENERAL INFORMATIONGeneral Inform
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12 GENERAL INFORMATION · SPONSORS
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- Page 22 and 23: 22 INSTITUTSPORTRAITMicrobiology in
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Results: The change from heterotrop
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favorable environment for degrading
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for several years. Thus, microbiall
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species of marine macroalgae of the
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FBV003Molecular and chemical charac
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interaction leads to the specific a
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There are several polyketide syntha
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[2] Steffen, W. et al. (2010): Orga
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three F-box proteins Fbx15, Fbx23 a
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orange juice industry and its utili
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FBP035Activation of a silent second
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lignocellulose and the secretion of
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about 600 S. aureus proteins from 3
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FGP011Functional genome analysis of
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hyperthermophilic D-arabitol dehydr
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GWV012Autotrophic Production of Sta
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EPS matrix showed that it consists
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enzyme was purified via metal ion a
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GWP047Production of microbial biosu
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function, activity, influence on gl
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selected phyllosphere bacteria was
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groups. Multiple isolates were avai
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Dinoroseobacter shibae for our knoc
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MPV009Connecting cell cycle to path
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MPV018Functional characterisation o
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dependent polar flagellum. The torq
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(ciprofloxacin, gentamicin, sulfame
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MPP023GliT a novel thiol oxidase -
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that can confer cell wall attachmen
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hemagglutinates sheep erythrocytes.
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about 600 bacterial proteins from o
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an un-inoculated reference cell, pr
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OTV008Structural analysis of the po
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and at least 99.5% of their respect
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PSP006Investigation of PEP-PTS homo
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a novel initiation mechanism operat
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RGP043Influence of Temperature on e
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[3] was investigated. The specific
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transcriptionally induced in respon
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cations. Besides the catalase depen
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SRP016Effect of the sRNA repeat RSs
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acteriocines, proteins involved in
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264 AUTORENBreinig, F.FBP010FBP023B
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266 AUTORENGoerke, C.Goesmann, A.Go
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268 AUTORENKlaus, T.Klebanoff, S. J
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270 AUTORENMüller, Al.Müller, Ane
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272 AUTORENScherlach, K.Scheunemann
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274 AUTORENWagner, J.Wagner, N.Wahl
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276 PERSONALIA AUS DER MIKROBIOLOGI
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278 PROMOTIONEN 2010Lars Schreiber:
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280 PROMOTIONEN 2010Universität Je
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282 PROMOTIONEN 2010Universität Ro
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Die EINE, auf dieSie gewartet haben