cations. Besides the catalase dependent damage of proteins the H 2O 2dependent decomposition of DNA was analysed. To address the variety andthe extent of H 2O 2 induced oxidative modifications at the proteome level thecatalase mutant was applied as a tool in LC-MS/MS studies. Interestingly,numerous oxidative modifications were found even for wild type cells underin vivo conditions during fermentation of C. glutamicum in controlledbioreactors. In particular enzymes of central metabolic pathways wereidentified as targets. Our results underline the continuous formation of ROSand unravel their deleterious effects on the physiological performance of C.glutamicum in spite of the presence of a highly active catalase enzyme.SRV008On the multitude of mechanisms that establish high-levelheavy metal resistance in an aggregate formingbacteriumG. Sturm*, J. GescherDepartment of Microbiology, Albert-Ludwigs-University, Freiburg,GermanyIn the last decades chromium has become a wide spread pollutant in theenvironment. This is mainly due to anthropogenic factors, namely an ofteninadequate toxic waste management in leather tannery, dye-, car- and steelindustry.Consequently chromium has become the most important heavymetal pollutant in the European Union. The toxicity of chromium isdependent on its oxidation state. Cr(VI) is the most toxic and bioavailableform, whereas Cr(III) is only sparsely soluble and therefore less toxic.In this study the chromate resistance strategy of a new Leucobacter species(L. chromiiresistens) was investigated [1]. This species is capable oftolerating more than 300 mM chromate and shows a distinct correlationbetween the chromate concentration in the medium and the production ofaggregates. Formation of these aggregates accompanies with the enhancedproduction of extracellular polymeric substances (EPS), mainly extracellularDNA (eDNA) and sugars. Extracellular DNA was shown to be essential forthe structural integrity of the aggregates. Inhibition of aggregate formationvia DNaseI treatment resulted in an almost complete loss of resistanceagainst potassium chromate. Our hypothesis regarding the role of EPSproduction and cell aggregation is that these factors result in decreasedCr(VI) uptake and therefore reduce intracellular Cr(VI) concentrations.Besides aggregate formation, Leucobacter chromiiresistens produces acarotene-related pigment in the membrane as a response to chromium stress.Carotenes are known to function as radical quenchers in photosyntheticorganisms. In L. chromiiresistens they might protect the cell from lipidperoxide formation triggered by chromium radicals. Last but not least wecould measure a soluble cytoplasmic chromate reductase activity. NAD(P)Hserves as electron donor for this enzyme.We suggest that aggregate formation, carotene production and chromatereductase expression serve in an orchestrated way to protect the cell fromoxidative stress caused by chromium(VI) or chromium radicals.[1] Sturm, G. et al: Leucobacter chromiiresistens sp. nov., a novel chromate-resistant strain in thegenus Leucobacter. Int J Syst Evol Microbiol.SRV009Osmotic stress response in Bacillus subtilis - integrationof the fluxome with the regulatory networksM. Kohlstedt* 1 , J. Becker 1 , C. Korneli 1 , P.K. Sappa 2 , H. Meyer 3 , S. Maaß 4 ,M. Lalk 3 , U. Mäder 2 , E. Bremer 5 , M. Hecker 4 , U. Völker 2 , C. Wittmann 11 Institute of Biochemical Engineering, Braunschweig, Germany2 Institute for Genetics and Functional Genomics, Functional Genomics,Greifswald, Germany3 Institute of Pharmacy, Pharmaceutical Biology, Greifswald, Germany4 Institute for Microbiology, Microbial Physiology and Molecular Biology,Greifswald, Germany5 Institute for Molecular Microbiology, Marburg, GermanyBacillus subtilis is one of the major industrial working horses inbiotechnology. In industrial production environments it typicallyexperiences high osmolarity, making this an important parameter to beinvestigated. The specific osmotic stress response of Bacillus has beenelucidated in detail [1] but information about the integration into theregulatory network of B. subtilis is still incomplete. Protection against anosmotic challenge is primarily conferred by a specific adaptational responsethat controls the uptake, synthesis and accumulation of osmoprotectivesubstances. In addition to the uptake of compatible solutes, e.g. glycinebetaine, Bacillus subtilis is able to synthesize amino acids de novo especiallyglutamate and proline to counteract the external osmotic pressure.Furthermore, this specific osmoadaptation response is integrated with theSigB-dependent general stress response, because genes such as opuD andopuE are subject to overlapping control by SigB.In the present work, the response of Bacillus subtilis 168 trp + to osmoticstress was assessed by a polyomics approach, integrating the fluxome asfunctional network output of Bacillus subtilis with its cellular componentsinvolving metabolome, proteome and transcriptome analysis. For thispurpose, cells were grown in glucose-limited chemostats at NaClconcentrations up to 1.2M. At metabolic steady-state, samples wereanalyzed for systems-wide metabolome, transcriptome, proteome andfluxome analysis. This should unravel regulatory interactions between thedifferent functional layers of the cell [2].[1] Kempf, B. And E. Bremer (1998): Uptake and synthesis of compatible solutes as microbial stressresponses to high-osmolarity environments, Arch. Microbiol, 170:319-330.[2] Kohlstedt, M. et al (2010): Metabolic fluxes and beyond - systems biology understanding andengineering microbial metabolism, Appl. Microbiol. Biotechnol. 88:1065-1075.SRV010Post-transcriptional activation of the SacP phosphatasecounteracts phosphosugar stress in enterobacteriaK. Papenfort* 1 , D. Podkaminski 1 , C.K. Vanderpool 2 , J. Vogel 11 Institute for Molecular Infection Biology, Julius-Maximilians-University,Würzburg, Germany2 Department of Microbiology, University of Illinois at Urbana-Champaign,Urbana, USAQuestion: The small regulatory RNA SgrS is well known to counteractphosphosugar stress, a process that involves the post-transcriptionaltargeting of the ptsG mRNA, coding for the major glucose transporter [1].Bacterial non-coding RNAs have now been established to control theexpression of multiple target genes rather than single transcripts. In thisstudy we aimed to elucidate the target profile of SgrS in the model pathogenSalmonella Typhimurium.Methods: To investigate the role of SgrS in S. Typhimurium we made useof a pulse-expression approach that combines tightly controlled expressionof an sRNA from an inducible promoter with whole genome microarraysanalysis [2].Results: Our analysis revealed an extended SgrS regulon, displaying alarger set of repressed mRNA targets, but also up-regulation of a singletranscript, termed sacP. Interestingly, sacP is the 2nd gene of a polycistronicmessenger, however SgrS mediated gene activation is limited to sacP anddoes not render the expression of other members of this operon.Mechanistically, this up-regulation involves RNA duplex formation of SgrSwith distal parts of the preceding pldB mRNA and requires the action of theRNA chaperone Hfq and the RNase E ribonuclease. Biocomputational andbiochemical analysis have shown that SacP belongs to the group of HADphosphatasesthat display high affinity towards phosphorylated sugarsubstrates, including Glucose-6-phosphate [3]. Indeed, under phosphosugarstress conditions, post-transcriptional up-regulation of SacP by SgrS iscritical for cellular replication, suggesting that SacP activation is required todecrease the intracellular amount of phosphorylated sugars.Conclusions: We present a sophisticated mechanism of discoordinateoperon expression that leads to induction of the conserved sugarphosphatase SacP. SacP is required to dephosphorylate accumulated sugarcompounds and required for counteraction of phosphosugar stress inbacteria.[1] Vanderpool and Gottesman (2004): Mol. Microbiology 54(4):1076-89.[2] Papenfort et al (2006): Mol. Microbiology 62(6):1674-88.[3] Kuznetsova et al (2006): JBC; 281(47):36149-61.SRV011The Phage-Shock Protein LiaH of Bacillus subtilisD. Wolf* 1 , M. Reineck 1 , B. Voigt 2 , T. Mascher 11 Department I/Synth. Biologie, Ludwig-Maximilians-University, Munich,Planegg-Martinsried, Germany2 Ernst-Moritz-Arndt-University, Greifswald, GermanyThe LiaRS two-component system (TCS) is part of the cell envelope stressresponse in Bacillus subtilis, which is triggered by compounds that affect theintegrity of the cell wall [1, 2]. The main target of the response regulatorLiaR is the liaI promoter, resulting in a strong induction of the liaIH operon,which encodes a small putative membrane protein and a member of thespektrum | Tagungsband <strong>2011</strong>
Psp/IM30 protein family [2, 3]. Phage-shock proteins are widely conservedin bacteria, archaea, cyanobacteria and plants. LiaH forms large oligomericring structures reminiscent of those observed for PspA (E.coli) or Vipp1(A.thaliana). Comprehensive phenotypic profiling of lia mutants onlyrevealed weak sensitivities against cell envelope and oxidative stressconditions [3]. To gain a mechanistic insight into the physiological role ofB.subtilis LiaH, we searched for potential interaction partners. Bacterial twohybrid assays revealed a complex protein-protein interaction network inwhich LiaH is embedded. Moreover, we were able to demonstrate that LiaHplays an important role in protein secretion. Our collective data indicatesthat the lia system of B.subtilis has adopted a function similar to theproteobacterial phage-shock response, despite significant regulatorydifferences.[1] Jordan et al (2008): FEMS Microbiol. Rev. 32:107-146.[2] Mascher et al (2004): Antimicrob. Agents Chemother. 48:2888-2896.[3] Wolf et al (2010): J. Bacteriol. 192: 4680-93.SRV012Characterization of the farnesol-induced stress responsein Aspergillus nidulansD. Wartenberg* 1 , M. Voedisch 1 , O. Kniemeyer 1 , R. Winkler 2 ,A.A. Brakhage 11 Department of Molecular and Applied Microbiology, Hans Knöll Institute(HKI), Jena, Germany2 Department of Biotechnology and Food Engineering, Monterrey Institute ofTechnology, MexicoFarnesol is a sesquiterpene alcohol representing the first identified quorumsensing molecule in eukaryotic organisms. It is produced by the humanpathogenic fungus Candida albicans responsibly inhibiting the yeast-tohyphaeswitch and biofilm formation. Furthermore, it represses growth offilamentous fungi by triggering apoptosis as demonstrated for the modelorganism Aspergillus nidulans. We aimed to identify the molecular targetsof farnesol an thus carried out comparative proteome analysis. Aspergillusnidulans was grown in minimal medium over night and 50 μM farnesol wasadded 3 hours before harvesting. After preparing the protein extracts wecompared farnesol-induced and non-induced conditions by 2D-DIGE. Weidentified 53 proteins showing at least 1,5 fold significant alteration inrelative spot volume. Due to farnesol treatment many proteins involved incell cycle (Cdc48), morphogenesis (HexA) and general stress response wereup-regulated (HSP and ROS-detoxifying proteins). In addition we identifieda highly up-regulated protein of unknown function with a dehydrin-likemotif. Further proteome and northern blot analysis showed its involvementin an early response to farnesol. The corresponding deletion mutantexhibited no increased sensitivity to farnesol. However, the dehydrin-likeprotein is involved in osmoadaptation and sexual development whichexemplifies an additional target of farnesol in filamentous fungi.SRV013Structural und functional insight into pilus sensing by theCpx envelope stress systemS. Hunke* 1 , P. Scheerer 2 , N. Krauß 31 Department of Biology, Humboldt University, Berlin, Germany2 Institute for Medicinal Physics and Biophysics (CC2), Charite,Berlin,Germany3 School of Biological and Chemical Sciences, Queen Mary University ofLondon, London, United KingdomTwo-component signal transduction systems (TCS) are the predominantadaption machineries of bacteria to cope with environmental changes. Inmany TCSs auxiliary proteins enable responses to additional stimuli. TheCpx-TCS is the global modulator of cell envelope-stress that integrates verydifferent signals. It consists of the kinase CpxA, the regulator CpxR and theauxiliary protein CpxP. CpxP both inhibits activation of CpxA and isindispensable for the quality control system of P pili that are crucial foruropathogenic Escherichia coli during kidney colonization. However, it isnot clear how these two essential biological functions of CpxP are linked.We have solved the crystal structure of CpxP to 1.45 Å resolution with twomonomers being interdigitated like „left hands” forming a cap-shaped dimer(1). Our combined structural and functional studies suggest that CpxPinhibits the kinase CpxA through direct protein-protein interaction.It has been proposed that Cpx pathway activation is caused by titrating CpxPaway from CpxA (2). A prerequisite of this scenario is the detection ofunfolded proteins by CpxP which might result from a chaperone-likeactivity (3). We will not only provide evidence for a chaperone-like activityof CpxP but also corroborate the functionality of an extended hydrophobiccleft on the convex surface of CpxP as a recognition site for misfolded pilussubunits. Therefore, we analyzed the capacities of the CpxP single-sitemutants to promote pili degradation in vivo.From our combined results we propose a model that elucidates bothfunctions of CpxP. Accordingly, the structural details of CpxP provide a firstinsight how a periplasmic TCS inhibitor blocks its cognate kinase and isreleased from it.[1] Zhou, Keller, Volker, Krauß, Scheerer and Hunke, in revision.[2] Isaac et al. (2005): Proc Natl Acad Sci USA 102, 17775-17779.[3] DiGiuseppe, P.A., and Silhavy, T.J. (2003): J Bacteriol 185, 2432-2440.SRV014In vivo phosphorylation patterns of key stressosomeproteins define a second feedback loop that limitsactivation of Bacillus subtilis σ BC. Eymann* 1 , S. Schulz 1 , K. Gronau 1 , D. Becher 1 , M. Hecker 1 , C.W. Price 21 Institute for Microbiology, Ernst-Moritz-Arndt-University, Greifswald,Germany2 Department of Microbiology, University of California, Davis, USAThe Bacillus subtilis stressosome is a 1.8 MDa complex that orchestratesactivation of the σ B transcription factor in response to environmental signals.It comprises members of the RsbR co-antagonist family and the RsbSantagonist, whose similar STAS domains form a core that sequesters theRsbT serine-threonine kinase. Stress-induced phosphorylation of the STASdomains by RsbT is associated with its release from core, allowing RsbT toactivate a downstream regulator. Here we investigate the in vivophosphorylation of RsbRA and its RsbRB, RsbRC and RsbRD paralogs,whose STAS domains share two conserved threonine residues. In unstressedcells these RsbR proteins are known to be phosphorylated on their more N-terminal threonine, exemplified by RsbRA T171. T171 phosphorylation isthought to be prerequisite but not the trigger for activation, which correlatesinstead with stress-induced serine phosphorylation of RsbS. We show herethat all the initial threonine modifications require RsbT kinase. Also,phosphorylation on the more C-terminal threonine, exemplified by RsbRAT205, had not been detected in vivo. We find (i) RsbRA is additionallyphosphorylated on T205 following strong stresses; (ii) this modificationdepends on RsbT; and (iii) T205A substitution greatly increases post-stressactivation of σ B . We infer that T205 phosphorylation constitutes a secondfeedback mechanism that limits σ B activation, operating in addition to theRsbX feedback phosphatase. Loss of RsbX function greatly increases thefraction of phosphorylated RsbS and doubly phosphoylated RsbRA inunstressed cells. Thus RsbX both maintains the ready state of thestressosome prior to stress, and restores it post-stress. Because similar RsbR-S-T modules are found in diverse bacteria, our results may have broadapplication.SRV015Signal perception and transduction by the transcriptionalactivator CadC of Escherichia coliI. Haneburger* 1 , S. Buchner 1 , A. Eichinger 2 , C. Koller 1 , A. Skerra 2 , K. Jung 11 Department I - Microbiology, Ludwig-Maximilians-University MunichMartinsried, Germany2 Department for Biological Chemistry, Technical University Munich,Freising-Weihenstephan, GermanyAdaptation of E. coli to acidic stress is mediated by the concerted action ofseveral proteins, among them the inducible amino acid decarboxylasesystems. One of these systems is the Cad system that is induced at lowexternal pH and concomitantly available lysine. The transcriptional activatorCadC of the Cad system belongs to the ToxR-like proteins that arecharacterized by a common topology. These proteins possess a periplasmicsensor domain, a single transmembrane helix and a cytoplasmic DNAbindingdomain. Recent data revealed that the periplasmic domain of CadCis responsible for pH sensing, while lysine signaling is mediated by aninteraction of CadC with the lysine permease LysP. We are interested inelucidating how the inner-membrane protein CadC is able to perceive andtransduce these signals across the membrane and subsequently activatestranscription of the cadBA operon.spektrum | Tagungsband <strong>2011</strong>
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3Vereinigung für Allgemeine und An
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8 GENERAL INFORMATIONGeneral Inform
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12 GENERAL INFORMATION · SPONSORS
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14 GENERAL INFORMATIONEinladung zur
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22 INSTITUTSPORTRAITMicrobiology in
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INSTITUTSPORTRAITGrundlagen der Mik
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28 CONFERENCE PROGRAMMECONFERENCE P
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ISV01The final meters to the tapH.-
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ISV11No abstract submitted!ISV12Mon
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ISV22Applying ecological principles
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ISV31Fatty acid synthesis in fungal
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AMV008Structure and function of the
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pathway determination in digesters
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nearly the same growth rate as the
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the corresponding cell extracts. Th
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AMP035Diversity and Distribution of
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The gene cluster in the genome of t
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ARV004Subcellular organization and
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[1] Kennelly, P. J. (2003): Biochem
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[3] Yuzenkova. Y. and N. Zenkin (20
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(TPM-1), a subunit of the Arp2/3 co
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in all directions, generating a sha
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localization of cell end markers [1
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By the use of their C-terminal doma
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possibility that the transcription
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Bacillus subtilis. BiFC experiments
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published software package ARCIMBOL
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EMV005Anaerobic oxidation of methan
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esistance exists as a continuum bet
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ease of use for each method are dis
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ecycles organic compounds might be
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EMP009Isotope fractionation of nitr
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fluxes via plant into rhizosphere a
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EMP025Fungi on Abies grandis woodM.
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nutraceutical, and sterile manufact
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the environment and to human health
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EMP049Identification and characteri
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EMP058Functional diversity of micro
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EMP066Nutritional physiology of Sar
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acids, indicating that pyruvate is
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[1]. Interestingly, the locus locat
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mobilized via leaching processes dr
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Results: The change from heterotrop
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favorable environment for degrading
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for several years. Thus, microbiall
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species of marine macroalgae of the
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FBV003Molecular and chemical charac
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interaction leads to the specific a
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There are several polyketide syntha
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[2] Steffen, W. et al. (2010): Orga
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three F-box proteins Fbx15, Fbx23 a
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orange juice industry and its utili
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FBP035Activation of a silent second
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lignocellulose and the secretion of
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about 600 S. aureus proteins from 3
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FGP011Functional genome analysis of
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FMV001Influence of osmotic and pH s
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microbiological growth inhibition t
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Results: Out of 210 samples of raw
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FMP017Prevalence and pathogenicity
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hyperthermophilic D-arabitol dehydr
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GWV012Autotrophic Production of Sta
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EPS matrix showed that it consists
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enzyme was purified via metal ion a
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GWP016O-demethylenation catalyzed b
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finally aim at the inactivation of
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Results: 4 of 9 parent strains were
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GWP047Production of microbial biosu
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Based on these foregoing works we h
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function, activity, influence on gl
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selected phyllosphere bacteria was
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groups. Multiple isolates were avai
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Dinoroseobacter shibae for our knoc
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Here, we present a comparative prot
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MPV009Connecting cell cycle to path
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MPV018Functional characterisation o
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dependent polar flagellum. The torq
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(ciprofloxacin, gentamicin, sulfame
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that can confer cell wall attachmen
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MPP040Influence of increases soil t
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hemagglutinates sheep erythrocytes.
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about 600 bacterial proteins from o
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NTP003Resolution of natural microbi
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- Page 276 and 277: 276 PERSONALIA AUS DER MIKROBIOLOGI
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