The gene product of PA1242 (sprP) contains a predicted signal sequenceand a peptidase S8 domain. However, it contains a non-canonical catalytictriad composed of histidine, asparagine and serine. Sequence analysisrevealed the presence of an additional element in the domain organization ofthe protease. SprP carries beside its signal peptide and the S8 domain adomain of unknown function (DUF) between both elements. Afteridentification SprP was cloned, expressed in E. coli and the protease activitywas measured with protease substrates like casein and Suc-AAPF-pNA.Proteases have also an impact on different physiological processes likeprotein processing and activation, secretion of other proteins andpathogenicity of the host bacterium. A P. aeruginosa sprP-negative mutantwas constructed and different phenotypes were tested to elucidate thephysiological role of SprP. We were able to illustrate an eminent role ofSprP by characterization of different phenotypes. Deletion of sprP causesthe loss of motility, an increased biofilm formation and the accumulation ofcell aggregates during growth.PSP015The lipase specific chaperone LipH is required for properinner membrane translocation of Lipase A inPseudomonas aeruginosaR. ABOUBI* 1 , S. Wilhelm 1 , K.-E. Jäger 1 , F. Rosenau 21 Institute for Molecular Enzyme Technology, Heinrich-Heine-University,Jülich, Germany2 Institute for Pharmaceutical Biotechnology, Ulm, GermanyFolding of lipase A from P. aeruginosa essentially requires in vivo and invitro the action of the steric chaperone LipH. Such lipase specific foldases(Lif) consist of an amino terminal membrane anchor followed by a variable40 aa domain and the large carboxy terminal folding domain. In vitrorefolding experiments revealed that only the folding domain of LipH isneeded to fold lipases into their enzymatically active conformation. The 3Dstructure of such a folding domain, of the closely related lif protein fromBurkholderia glumae, was solved in complex with its cognate lipase. In thisstructure the variable region could not be modeled and was thereforesuggested to be very flexible or unstructured. A physiological function ofthis domain is unknown at present.We constructed a LipH variant, in which the variable domain was deleted.As consequence the N-terminal membrane anchor was directly attached tothe folding domain of LipH. Upon expression of this modified LipHtogether with its cognate lipase LipA in the homologous host P. aeruginosaa complete loss of secretion was detected. Not only lipase LipA was nolonger secreted but also other extracellular Sec substrates proteins such asElastaseB and ExotoxinA failed to reach the culture supernatant, whereasTAT substrates like phospholipase where perfectly secreted.Expression of the lipase together with the truncated foldase in P. aeruginosaleads to a blockage of the Sec apparatus and thus suggests a probablefunction of the variable domain for interaction of the protein with the Secapparatusthereby probably being involved in the release of lipase from theSec machinery.PSP016Biosynthesis and occurence of open chain tetrapyrroles incryptophytesK. Overkamp* 1 , J. Wiethaus 1 , K. Hoef-Emden 2 , N. Frankenberg-Dinkel 11 Physiology of Microorganisms, Ruhr-University, Bochum, Germany2 Institute of Botany, University of Cologne, Cologne, GermanyPhycobiliproteins are light-harvesting proteins, which occur incyanobacteria, red algae and cryptophytes in addition to chlorophyllcontaining antenna complexes. They allow the organisms to efficientlyabsorb light in regions of the visible spectrum that are poorly covered bychlorophylls. Cryptophytes are unicellular, eukaryotic algae and widespreadin marine and limnic waters. Their phycobiliproteins consist of an (αα‘ββ)heterotetrameric apo-protein covalently associated with characteristic openchain tetrapyrroles, which act as light absorbing chromophores.Cryptophytes employ the six different chromophores phycocyanobilin(PCB), phycoerythrobilin (PEB), 15,16 dihydrobiliverdin (15,16-DHBV),mesobiliverdin (MBV), bilin 584 and bilin 618 for light-harvesting.The chromophore composition of the novel phycobiliproteins PC577 andPC630 from the cryptophytes Hemiselmis pacifica and Chroomonas sp. isstill unknown. Purification of those phycobiliproteins and subsequentanalysis of isolated chromopeptides using High Performance LiquidChromatography (HPLC) and UV-Vis spectroscopy identified severalcandidate chromophores. While the PC630 α and α‘ subunits seem to beassociated with biliverdin IXα, the chromophore of the PC577 α and α‘subunit is still unknown. In contrast, PEB is most likely attached to the βsubunits of both proteins. Continuative HPLC and NMR experiments will bedone to elucidate the correct chromophore composition, which will givefurther insights into the evolutionary history of cryptophytes.Not only the chromophore composition of several phycobiliproteins incryptophytes is unknown but also the biosynthetic pathway of the openchain tetrapyrroles. Therefore the cryptophyte Guillardia theta in which thephycobiliprotein PE545 is associated with the chromophores 15,16-DHBVand PEB will serve as a model organism for the elucidation of thebiosynthetic pathway. Extensive bioinformatic analyses and amino acidsequence alignments identified a putative heme oxygenase and a PebB-likebilin reductase in G. theta. Currently, the enzymatic activities of theseputative bilin biosynthesis enzymes is investigated and compared to knownactivities of cyanobacteria and higher plants.PSP017Bacterial cytochrome c peroxidase BCCP of Shewanellaoneidensis Structure and physiological role underdissimilatory iron reducing conditionsB. Schütz* 1 , J. Seidel 2 , O. Einsle 2 , J. Gescher 11 Institute for Biology II/Microbiology, Albert-Ludwigs-University, Freiburg,Germany2 Institute for Organic Chemistry and Biochemistry, Albert-Ludwigs-University, Freiburg, GermanyBacterial diheme c-type cytochrome peroxidases (CcpAs) catalyze theperiplasmic reduction of hydrogen peroxide to water. The γ-proteobacteriumS. oneidensis produces the peroxidase BCCP under dissimilatory ironreducing conditions. We wanted to understand the function of this protein inthe organism as well as its putative connection to the electron transport chainto ferric iron. BCCP was isolated after heterologous expression and testedfor its peroxidase activity as well as for its structural conformation asanalyzed by X-ray crystallography. BCCP exhibited in vitro peroxidaseactivity and had a structure typical for diheme peroxidases. It was producedin almost equal amounts under anaerobic as well as microaerophilicconditions. With 50 mM ferric citrate and 50 μM oxygen in the growthmedium, BCCP expression results in a strong selective advantage for thecell as was detected in competitive growth experiments between wild typeand ΔccpA mutant cells that lack the entire ccpA gene due to a markerlessdeletion. This was expected since we observed a large fraction of theavailable oxygen being converted into hydrogen peroxide. Hydrogenperoxide production occurred during the entire time course of the growthexperiment and was apparently not coupled to a specific growth phase. Wewere unable to reduce BCCP directly with either CymA, MtrA or FccA butisolated the small monoheme ScyA as an electron transport mediatorbetween CymA and BCCP. As we also were unable to reduce ScyA withother periplasmic cytochromes CymA, ScyA and BCCP seem to build aspecific electron transport chain to hydrogen peroxide. Consequently, the sofar believed lack of specificity in interprotein electron transport between c-type cytochromes has to be questioned.PSP018Detoxification of propionyl-CoA in Candida albicans:Implications for a modified beta-oxidation pathwayC. Otzen*, M. BrockDepartment of Microbial Pathogenicity Mechanisms, Hans Knöll Institute(HKI), Jena, GermanyPropionyl-CoA is a common metabolite deriving from amino aciddegradation or breakdown of odd-chain fatty acids. All cells need to avoidan accumulation of propionyl-CoA, since this CoA-ester can interfere withvarious enzymatic reactions of primary carbon metabolism. Mammals andseveral bacteria use the so-called methylmalonyl-CoA pathway fordetoxification and metabolism of propionyl-CoA, leading to the citric acidcycle intermediate succinyl-CoA. Contrarily, some bacteria and most fungiutilize the methylcitrate cycle for propionyl-CoA degradation. In the latterpathway propionyl-CoA is alpha-oxidized and yields pyruvate. Interestingly,Candida albicans neither contains genes encoding enzymes of themethylmalonyl-CoA nor of the methylcitrate cycle, but is able to grow onpropionate, odd-chain fatty acids and proteins as carbon sources. Thus, anspektrum | Tagungsband <strong>2011</strong>
alternative pathway for propionyl-CoA degradation must exist. To elucidatethe responsible pathway we performed several proteomic and microarraystudies. Interestingly, all experiments implied that propionyl-CoA isdegraded via beta-oxidation of fatty acids, although is has been assumed thatthe dehydrogenation of propionyl-CoA to acryloyl-CoA isthermodynamically unfavored. However, in agreement with the assumptionof beta-oxidation, a fox2 mutant, encoding for a 3-hydroxyacyl-CoAepimerase, required for fatty acid beta-oxidation, was unable to usepropionate as sole carbon and energy source. Surprisingly, growth testsshowed that the fox2 mutant is still able to use 3-hydroxypropionate as solecarbon source. Thus, it appears likely that 3-hydroxypropionate is anintermediate of a modified beta oxidation for propionyl-CoA degradationand the final product most likely consists of acetyl-CoA. To further confirmthis assumption, we are currently generating mutant strains of the postulatedbranch of the beta oxidation and apply NMR analyzes on C. albicans wildtype and mutant cells grown on 13 C-labeled propionate. Results will show,whether intermediates of a modified beta-oxidation of propionyl-CoAaccumulate in the respective mutants.PSP019Resting spores of Streptomyces coelicolor harbour anactive respiratory nitrate reductaseM. Fischer*, D. Falke*, G. SawersInstitute of Biology/Microbiology, Martin-Luther-University Halle-Wittenberg, Halle, GermanyStreptomyces coelicolor is an obligate aerobic soil bacterium that belongs tothe high-GC Gram-positive actinobacteria. A characteristic of this group is acomplex life cycle with stages that include vegetative hyphae, hydrophobicaerial hyphae and production of exospores. During spore formation specificstructural proteins, enzymes and storage compounds are synthesized andincorporated into the final spore compartment. These various cellularcomponents ensure that metabolism of these resting spores is maintained at alow-level to retain viability over long periods and at the same time allowsthem to survive a barrage of environmental insults. Long-term survivalrequires that essential metabolic pathways to cope with anaerobic conditionsare also present. The ability to respire with nitrate is one means by whichthis can be achieved. The genome of S. coelicolor has three narGHJIoperons, each encoding a respiratory nitrate reductase (Nar) [1], which ismembrane-associated with the active site facing the cytoplasm. Previousstudies have demonstrated that in spores and exponentially growingmycelium Nar-dependent nitrate reduction occurs [2].In this study we investigated which Nar is active in spores. Freshlyharvested spores of S. coelicolor wild type M145 could reduce nitrate at asignificant rate without addition of an exogenous electron donor. Moreover,this activity was also detectable in crude extracts of spores and could bevisualized by direct staining after native PAGE. Analysis of definedknockout mutants demonstrated that this activity was due to Nar1. Using adiscontinuous assay to measure nitrite production by spores we could showthat Nar1 was only capable of nitrate reduction under anaerobic conditions.Since Nar1 activity was measurable in crude extracts of spores that wereincubated both anaerobically and aerobically this finding suggests thatspores regulate either nitrate transport or Nar1 activity in response tooxygen. Notably, studies using protein synthesis inhibitors revealed thatNar1 is always present and active in resting spores.[1] van Keulen, G. et al (2005): Nitrate respiration in the actinomycete Streptomyces coelicolor.Biochem Soc Trans 33(Pt 1):210-2.[2] Fischer, M. et al (2010): The obligate aerobe Streptomyces coelicolor A3(2) synthesizes threeactive respiratory nitrate reductases. Microbiology 156(Pt 10):3166-79.PSP020Diversity in bacterial degradation of the steroidcompound cholateV. Suvekbala, J. Holert*, B. PhilippDepartment of Biology, Microbial Ecology, University of Konstanz,Konstanz, Germanybacteria was assessed by quantitative enrichments of steroid-degradingbacteria with littoral sediments of Lake Constance and the bile salt cholateas a model substance.Fifteen different strains of cholate-degrading bacteria were isolated fromhigh dilutions of littoral sediments. Two strains were characterized further.According to growth experiments and HPLC-analysis the first strain,Zoogloea sp. strain 1, degraded cholate via the 9,10-seco pathway asindicated by the formation of the characteristic degradation intermediatesDHADD (7,12-dihydroxy-1,4-androstadiene-3,17-dione) and THSATD(3,7,12-trihydroxy-9,10-secoandrosta-1,3,5(10)triene-9,17-dione). Duringcholate degradation by the second strain, Dietzia sp. strain 2, thecharacteristic intermediates of the 9,10-seco-pathway were not detected.Instead, two new compounds were detected by HPLC-analysis that differedfrom the UV-spectra of steroid compounds occurring in the 9,10-secopathway.Strain 2 could also not grow with the characteristic intermediatesof cholate degradation, which were isolated from cultures of the cholatedegradingbacterium Pseudomonas sp. strain Chol1 [2, 3]. In addition, thepresence of these compounds inhibited cholate degradation by strain 2.These results clearly showed that strain 2 harbours a different pathway forcholate degradation, which has not been described so far, indicating that thebiochemical diversity of aerobic steroid degradation in bacteria has beenunderestimated.[1] Philipp (2010): Appl Microbiol Biotechnol in press.[2] Birkenmaier et al (2007): J Bacteriol J Bacteriol 189:7165-7173.[3] Philipp et al (2006): Arch Microbiol 185:192-201.PSP021A novel high-affinity hydrogenase in Ralstonia eutrophaC. Schäfer*, A. Pohlmann, S. Frielingsdorf, O. Lenz, B. FriedrichInstitute for Biology, Microbiology, Berlin, GermanyWithin the global hydrogen cycle, soil deposition is the most importantnatural process responsible for removal of H 2 from the atmosphere.However, the mechanism by which H 2 is taken up remained elusive.Recently, a high-affinity hydrogenase has been indentified in spore-formingActinomycetes of the genus Streptomyces, which is able to oxidize H 2 atatmospheric levels. It has been suggested that this class of [NiFe]-hydrogenases is responsible for the H 2 uptake in soils [1].Interestingly, the genes coding for this high-affinity hydrogenase are alsopresent in the genome of the beta-proteobacterium Ralstonia eutropha [2].The two structural genes, encoded the hydrogenase small and large subunits,are part of a conserved operon structure, which also contains a complete setof hydrogenase maturation genes and a number of conserved unknowngenes. On the basis of its high similarity to the hydrogenases from sporeformingactinomycetes, the protein was designated actinomyceteshydrogenase (AH).Recently, we could show that Ralstonia eutropha cells containing solely theAH are capable in H 2 uptake as determined by gas chromatography. For adetailed investigation of the biochemical properties of the AH, a strain wasconstructed in which the weak native promoter of the AH operon wasexchanged by the strong promoter of the membrane-bound hydrogenasegenes from Ralstonia eutropha. AH-mediated H 2-oxidizing activity insoluble protein extracts was shown by activity staining in native gels usingNBT as an artificial electron acceptor. The AH was active also in theproduction of HD and D 2 from D 2O as shown by H/D-exchangeexperiments. We are currently constructing an AH derivative carrying anaffinity tag for facile purification and subsequent electrochemical andspectroscopic characterization. Furthermore, we are conducting experimentsin order to determine the regulatory background of AH gene expression andthe role of this interesting enzyme in R. eutropha. One attractive hypothesisis that the AH may contribute to the survival of the cells under starvationconditions by using the atmospheric trace concentrations of H 2.[1] Constant, P. et al (2010): Streptomycetes contributing to atmospheric molecular hydrogen soiluptake are widespread and encode a putative high-affinity [NiFe]-hydrogenase. Environ Microbiol.12(3), 821-9.[2] Schwartz, E. et al (2003): Complete nucleotide sequence of pHG1: a Ralstonia eutropha H16megaplasmid encoding key enzymes of H(2)-based lithoautotrophy and anaerobiosis. J Mol Biol.332(2), 369-83.Steroids are ubiquitous natural compounds with diverse functions ineukaryotic organisms. They enter the environment mainly via excretion byand decay of animals and plants. In bacteria, steroids occur only as rareexceptions but the ability of transforming and degrading steroids iswidespread among bacteria. The only well-described pathway for aerobicdegradation of steroid compounds is the so-called 9,10-seco pathway [1]. Inthis study, the organismic and biochemical diversity of steroid-degradingspektrum | Tagungsband <strong>2011</strong>
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3Vereinigung für Allgemeine und An
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8 GENERAL INFORMATIONGeneral Inform
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12 GENERAL INFORMATION · SPONSORS
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14 GENERAL INFORMATIONEinladung zur
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16 AUS DEN FACHGRUPPEN DER VAAMFach
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18 AUS DEN FACHGRUPPEN DER VAAMFach
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20 AUS DEN FACHGRUPPEN DER VAAMFach
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22 INSTITUTSPORTRAITMicrobiology in
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INSTITUTSPORTRAITGrundlagen der Mik
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26 CONFERENCE PROGRAMME | OVERVIEWT
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28 CONFERENCE PROGRAMMECONFERENCE P
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32 SPECIAL GROUPSACTIVITIES OF THE
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36 SHORT LECTURESMonday, April 4, 0
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42 SHORT LECTURESWednesday, April 6
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ISV01The final meters to the tapH.-
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ISV11No abstract submitted!ISV12Mon
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ISV22Applying ecological principles
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ISV31Fatty acid synthesis in fungal
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AMV008Structure and function of the
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pathway determination in digesters
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nearly the same growth rate as the
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the corresponding cell extracts. Th
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AMP035Diversity and Distribution of
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The gene cluster in the genome of t
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ARV004Subcellular organization and
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[1] Kennelly, P. J. (2003): Biochem
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[3] Yuzenkova. Y. and N. Zenkin (20
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(TPM-1), a subunit of the Arp2/3 co
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in all directions, generating a sha
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localization of cell end markers [1
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By the use of their C-terminal doma
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possibility that the transcription
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Bacillus subtilis. BiFC experiments
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published software package ARCIMBOL
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EMV005Anaerobic oxidation of methan
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esistance exists as a continuum bet
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ease of use for each method are dis
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ecycles organic compounds might be
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EMP009Isotope fractionation of nitr
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fluxes via plant into rhizosphere a
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EMP025Fungi on Abies grandis woodM.
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nutraceutical, and sterile manufact
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the environment and to human health
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EMP049Identification and characteri
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EMP058Functional diversity of micro
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EMP066Nutritional physiology of Sar
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acids, indicating that pyruvate is
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[1]. Interestingly, the locus locat
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mobilized via leaching processes dr
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Results: The change from heterotrop
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favorable environment for degrading
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for several years. Thus, microbiall
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species of marine macroalgae of the
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FBV003Molecular and chemical charac
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interaction leads to the specific a
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There are several polyketide syntha
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[2] Steffen, W. et al. (2010): Orga
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three F-box proteins Fbx15, Fbx23 a
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orange juice industry and its utili
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FBP035Activation of a silent second
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lignocellulose and the secretion of
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about 600 S. aureus proteins from 3
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FGP011Functional genome analysis of
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FMV001Influence of osmotic and pH s
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microbiological growth inhibition t
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Results: Out of 210 samples of raw
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FMP017Prevalence and pathogenicity
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hyperthermophilic D-arabitol dehydr
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GWV012Autotrophic Production of Sta
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EPS matrix showed that it consists
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enzyme was purified via metal ion a
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GWP016O-demethylenation catalyzed b
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[2] Mohebali, G. & A. S. Ball (2008
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finally aim at the inactivation of
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Results: 4 of 9 parent strains were
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GWP047Production of microbial biosu
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Based on these foregoing works we h
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function, activity, influence on gl
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selected phyllosphere bacteria was
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- Page 264 and 265: 264 AUTORENBreinig, F.FBP010FBP023B
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274 AUTORENWagner, J.Wagner, N.Wahl
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276 PERSONALIA AUS DER MIKROBIOLOGI
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278 PROMOTIONEN 2010Lars Schreiber:
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280 PROMOTIONEN 2010Universität Je
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282 PROMOTIONEN 2010Universität Ro
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Die EINE, auf dieSie gewartet haben