[3] was investigated. The specific biotransformation activity and the glucoseconsumption of the wild type E. coli BL21(DE3) was compared to its ΔpfkAmutant, which showed a 90% reduced phosphofructokinase activity. Thespecific biotransformation activity of both strains was similar, but in theΔpfkA deletion mutant the NADPH concentration was increased and theglucose consumption required for conversion of 50 mM MAA to MHB wasdecreased by 50%.It has previously been shown that the overexpression of the zwf geneencoding glucose 6-phosphate dehydrogenase resulted in higherproductivities in several biotransformation processes [4]. Besidesoverexpression of zwf and gnd (encoding 6-phosphogluconatedehydrogenase), we also aimed at the elucidation of the optimum expressionlevels of the other PPP genes.[1] Eguchi, T. et al (1992): Biosci Biotechnol Biochem, 56(5): 701-3.[2] W. Zhang, W. et al (2009): Appl Environ Microbiol, 75(3): 687-94.[3] Ernst, M. et al (2005): Appl Microbiol Biotechnol, 66(6): 629-34.[4] Lim, S. J. et al (2002): J Biosci Bioeng, 93(6): 543-9.SBP003Differences in signalling by directly and indirectlybinding ligands in bacterial chemotaxisS. Neumann* 1 , C. Hansen 2 , N. Wingreen 3 , V. Sourjik 11 Center for Molecular Biology (ZMBH), University of Heidelberg,Heidelberg, Germany2 Biophysics Program, Harvard University, Cambridge, USA3 Department of Molecular Biology, Princeton University, Princeton, USAIn chemotaxis of Escherichia coli and other bacteria, extracellular stimuliare perceived by transmembrane receptors that bind their ligands eitherdirectly, or indirectly through periplasmic-binding proteins (BPs). As BPsare also involved in ligand uptake, they provide a link between chemotaxisand nutrient utilization by cells.However, signalling by indirectly bindingligands remains much less understood than signalling by directly bindingligands. Here, we compared intracellular responses mediated by both typesof ligands and developed a new mathematical model for signalling byindirectly binding ligands. We show that indirect binding allows cells tobetter control sensitivity to specific ligands in response to their nutrientenvironment and to coordinate chemotaxis with ligand transport, but at thecost of the dynamic range being much narrower than for directly bindingligands. We further demonstrate that signal integrationby the chemosensory complexes does not depend on the type of ligand.Overall, our data suggest that the distinction between signalling by directlyand indirectly binding ligands is more physiologically important than thetraditional distinction between high- and low-abundance receptors.SBP004Heterologous gene expression in clonal populations:IPTG as inducer for lac operon expression and influenceof transacetylase activityA. Marbach*, K. BettenbrockSystems Biology, Max Planck Institute for Dynamics of Complex TechnicalSystems, Magdeburg, GermanyQuestion: The history of lac operon investigation started already 50 yearsago and lasts until today in the field of systems biology. Research is focusedon the question why bacteria use specific network designs to react toexternal stimuli. The Escherichia coli lac operon contains a positivefeedback loop. Inducer is taken up by the lactose permease which in turnleads to the production of more permease molecules resulting in anincreased capacity to take up inducer. This feedback regulation can causeheterologous gene expression in clonal populations. By using GFP asreporter it was previously shown that TMG can induce a bimodal inductionbehavior 1 . Because IPTG is the most preferred inducer in heterologous geneexpression we were interested in the question whether IPTG can also causedifferential gene expression.Methods: We compared ß-galactosidase activities after TMG and IPTGinduction in the wildtype and a lacY deletion strain and constructed Plac-gfpreporter strains to observe single cell behavior in the wildtype and indifferent mutant backgrounds.Results: By comparing TMG and IPTG induction in the wildtype and a lacYdeletion mutant we could show that both inducers are substrates of thelactose permease which is the prerequisite for the feedback loop. Weconstructed a Plac-gfp reporter strain and observed bimodal induction withTMG and also with IPTG. The comparison revealed that bimodal inductionby using IPTG occurs at an approximately tenfold lower concentration thanby using TMG. Furthermore, an influence of the lactose transacetylase onthe induction could be demonstrated by transferring the Plac-gfp fusion intoa lacA mutant background.Conclusions: The data show that although IPTG can pass the cell membranindependently of the lactose permease the feedback loop is sustained at lowinducer concentrations leading to differential gene expression in clonalpopulations. This have to be considered in heterologous gene expressionwhen the lac promoter is used as a tunable control element. Additionally, weprovide a comprehensive comparison between the two gratuitous inducer inisogenic strains and can show that even the lactose transacetylase have to beconsidered in mathematic modelling.[1] Ozbudak et al (2004): Nature 427, 737-740.SBP005Modelling the phosphotransferase system ofPseudomonas putida proposes an unexpected distributionof the involved phosphate fluxesK. Pflüger-Grau* 1 , M. Chavarría 2 , A. Kremling 11 Specialty Division for Systems Biotechnology, Technical UniversityMunich, Garching, Germany2 Systems Biology Program, Spanish National Center of Biotechnology,Madrid, SpainThe environmental bacterium Pseudomonas putida is known for itsmetabolic versatility and stress resistance. This requires various layers ofcontrol to coordinate the expression of specific genes to the overallphysiology of the cell. One prevalent physiological sensor to this end is thephosphotransferase system (PTS). Apart from the classicalphosphoenolpyruvate:carbohydrate PTS, many prokaryotes harbour also aPTS branch that is not involved in carbohydrate traffic, but participates inregulation of some metabolic processes in a fashion dependent on thephosphorylation state of the PTS proteins [1]. The genome of Pseudomonasputida KT2440 encodes only 5 recognizable PTS proteins building thePTS Fru , a sugar PTS responsible for fructose uptake, and PTS Ntr , the nitrogenPTS, which lacks any connection to sugar traffic but exerts variousregulatory roles. Both branches cross talk under specific metabolicconditions by phosphate exchange. A mathematical model was set up todescribe the available data of the state of phosphorylation of PtsN, one of thePTS Ntr proteins, in different environmental conditions and different strainvariants. Furthermore, data from flux balance analysis was used to determinesome of the kinetic parameters of the involved reactions. Interestingly,modelling the system proposed that during growth on the PTS substratefructose, about 80% of the required phosphoryl groups for fructose uptakevia the PTS Fru are provided by the PTS Ntr . This result is rather unexpectedand gives rise to new questions on the biological relevance of the cross talkbetween the two systems and its implementation in the overall metabolism.[1] Pflüger-Grau, K. and B. Görke (2010): Regulatory roles of the bacterial nitrogen-relatedphosphotransferase system. Tends Microbiol. 18, 205-214.SBP006Systems biotechnology towards superior production ofrecombinant proteins in Aspergillus nigerH. Driouch*, C. WittmannInstitute of Biochemical Engineering, University of Technology,Braunschweig, GermanyThe filamentous fungus Aspergillus niger is an important biocatalyst forindustrial production of enzymes as well as organic acids or antibiotics. Insubmerged cultivation, A. niger exhibits a complex morphology whichtypically has a strong influence on production performance. In this regard,comprehensive approaches, combining systems-wide analysis andoptimization at the cellular level with process-driven engineering of thebioreactor environment, seem most useful in order to achieve superiorproduction processes and we applied to protein producing A. niger. Theoptimization included the use of microparticles, added to the culture, whichallowed to precisely control the morphological shape of A. niger [1, 2] andincrease enzyme production in different recombinant A. niger strains. Thisstrategy was combined with model-based medium design and developmentof efficient feeding strategies. As result, production of the high-valueenzyme fructofuranosidase, an important biocatalyst for neo-sugars in foodspektrum | Tagungsband <strong>2011</strong>
or pharmaceutical industry, could be increased to 2800 U/mL, more thantenfold as compared to previous processes [3]. In current work, 13 C-basedmetabolic flux analysis was used to quantify the underlying carbon coremetabolism of A. niger under different production conditions including thecomparison of different mutants as well as morphological forms. Thispromises valuable insights towards the further development of A. niger as acell factory for recombinant proteins.[1] Driouch, H. et al (2010): Morphology engineering of Aspergillus niger for improved enzymeproduction. Biotechnol Bioeng; 105:1058-68.[2] Driouch H. et al (2010): Optimized bioprocess for production of fructofuranosidase byrecombinant Aspergillus niger. Appl Microbiol Biotechnol 87:<strong>2011</strong>-24.[3] Driouch H. et al (2010): Filamentous fungi in good shape: Microparticles for tailor-made fungalmorphology and enhanced enzyme production. Bioengineered Bugs (In press).SIV001A Screen to identify fungal and plant signals duringarbuscule formation in AM symbiosisC. Vogt*, H. Kuhn, N. RequenaBotanical Institute, Plant-Microbial-Interactions, <strong>Karlsruhe</strong> Institute ofTechnology (KIT), <strong>Karlsruhe</strong>, GermanyThe great success of arbuscular mycorrhiza (AM) symbiosis relies on themutualistic exchange of nutrients between the vast majority of all land plantsand the Glomeromycotan fungi. Most important for this interchange is thearbuscule as main organ of nutrition exchange. This fungal structure is buildinside the root cortex cells via invagination of the plasma membranefollowed by an intense dichotomous branching of the fungal hyphae. Theformation of the arbuscule requires a complex exchange of signals betweenthe two partners. The plant’s cellular program must be adjusted to allow theentry of the hyphae and to initiate the rearrangement necessary for theaccommodation of the fungus in the cell.The Phosphate Transporter 4 of Medicago truncatula (MtPT4) is located inthe periarbuscular membrane of the cortex cells, delivering the phosphateprovided by the fungus to the plant [1]. The presence of this mycorrhizaspecific expressed protein has been shown to be essential for properarbuscule development indicating a role of MtPT4 during this process [2].In order to identify fungal and plant proteins involved in the control of thearbuscule formation we developed a screen to search for factors that are ableto drive the expression of MtPT4 as a reporter gene for the onset ofarbuscule formation.[1] Harrison, M.J. et al (2002): A Phosphate Transporter from Medicago truncatula Involved in theAcquisition of Phosphate Released by Arbuscular Mycorrhizal Fungi. The Plant Cell 14: 2413-2429.[2] Javot, H et al (2007): A Medicago truncatula phosphate transporter indispensable for thearbuscular mycorrhizal symbiosis. Proceedings of the National Academy of Sciences 104: 1720-1725.SIV002An effector protein from the symbiotic fungus G.intraradices suppresses plant early defense responsesS. Kloppholz*, H. Kuhn, N. RequenaBotanical Institute, Plant-Microbial Interactions, <strong>Karlsruhe</strong> Institute ofTechnology (KIT), <strong>Karlsruhe</strong>, GermanyFor many microbial pathogens the delivery of effector proteins represents acrucial mechanism to manipulate their host and to enable colonization. Weshow that the symbiotic mycorrhizal fungus G. intraradices secretes thesmall, tandem repeat protein SP7 that targets the pathogenesis-relatedtranscription factor ERF19 at the nucleus of its host plants. ERF19 is highlyinduced in roots infected with the fungal pathogen Colletotrichum trifolii butonly transiently upregulated during early mycorrhizal colonization. Thelevel of C. trifolii-mediated induction of ERF19 can be reduced by theconstitutive expression of SP7 in planta. Additionally these roots exhibit ahigher mycorrhization status than control root lines after 5 and 12 days postinoculation with G. intraradices. Furthermore, expression of SP7 in the riceblast fungus M. oryzae attenuates root decay symptoms. Arbuscularmycorrhizal spore extracts highly induce ERF19 as well as pathogenesisrelatedproteins 10a/b expression in control roots, while this is softened inSP7 expressing lines. Our results suggest that SP7 is an effector thatcontributes to establish/maintain the biotrophic status of arbuscularmycorrhizal fungi in roots by counteracting the early plant immuneresponse.SIV003Drugs from bugs that kill bugs: Biosynthesis and functionof natural products from entompathogenic bacteriaH.B. BodeInstitute for Molecular Bio Science, Goethe-University, Frankfurt am Main,GermanyPhotorhabdus and Xenorhabdus live in symbiosis with Heterorhabditis andSteinernema nematodes, respectively. The bacteria-nematode complex ishighly entomopathogenic and is used in organic farming to kill differentinsect pests. Moreover, the difference between symbiosis (towards thenematode) and pathogenesis (towards the insects) can be studied using thesebacteria and we have started to look in detail into the role of bacterialsecondary metabolites, which might play a role in both processes. In the lastfew years we could identify (i) novel secondary metabolites, (ii) theircorresponding biosynthesis gene clusters, and (iii) could also proposefunctions to some of these compounds within the complex life cycle ofbacteria, nematodes, and insects. Examples are the isopropylstilbenes,unusual urea derivatives, a family of new linear peptides, the xenocoumacinantibiotics, simple amides and indole derivatives as well as anthraquinones.Additionally, the formation of small molecules specific for different stagesof the complex bacterial life style as well as the activation of the respectivebiosynthesis gene clusters under lab conditions will be presented and theirfunction will be discussed.SIV004Host selection shapes microbial community structure incockroach gutsC. Thompson*, C. Schauer, A. BruneDepartment of Biogeochemistry, Max Planck Institute for TerrestrialMicrobiology, Marburg, GermanyTermites harbor a diverse microbial community within their intestinal tractsthat allows them to digest wood and other lignocellulosic diets. While thecomposition of such assemblages is easily established, the influence of thehost on community structure and the role of gut microorganisms in hostdevelopment remain uncertain. Greater insights into such reciprocalinteractions could be obtained from gnotobiotic models, but due to theirelaborate social system termites cannot be raised under germ-freeconditions. As an alternative, we developed a gnotobiotic model of thecockroach Shelfordella lateralis. These cockroaches are non-social, can beraised under germ-free conditions, and are closely related to termites. Weinoculated gnotobiotic cockroaches with a full complement of termite gutmicrobiota and determined the resulting bacterial community structure by454 pyrosequencing of 16S rRNA genes. While certain members of thetermite gut microbiota successfully colonized the cockroach gut, otherlineages were completely lost. This demonstrates the importance of hostselection in shaping the structure of the intestinal microbial community. Inaddition, we found that in the absence of a gut microbiota, host developmentwas severely impaired but maturation was achieved after the animals wereconventionalized with cockroach gut microbiota. We expect that our modelwill also provide further insights into the digestive symbiosis.SIV005Immune response of the ant Camponotus floridanusagainst pathogens and its obligate mutualisticendosymbiontR. Gross* 1 , H. Feldhaar 2 , C. Ratzka 11 Chair of Microbiology, Julius-Maximilians-University, Würzburg,Germany2 Chair of Behavioural Biology, University of Osnabrück, Osnabrück,GermanyInsects rely on innate defense mechanisms to combat infections. Whereasthe immune system of Drosophila melanogaster is well characterized [1],much less is known in other insects, and in particular in social insects [2].Thus, we focused on the characterization of the innate immune system of thecarpenter ant Camponotus floridanus. This ant species harbours the obligateendosymbiont Blochmannia floridanus in bacteriocytes [3] and is thereforealso an interesting model organism to study the interactions between hosts,endosymbionts and pathogens.As a first step towards characterizing the ant´s immune response, we usedsuppression subtractive hybridization (SSH) to identify genes that arespektrum | Tagungsband <strong>2011</strong>
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14 GENERAL INFORMATIONEinladung zur
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22 INSTITUTSPORTRAITMicrobiology in
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INSTITUTSPORTRAITGrundlagen der Mik
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28 CONFERENCE PROGRAMMECONFERENCE P
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ISV01The final meters to the tapH.-
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ISV11No abstract submitted!ISV12Mon
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ISV22Applying ecological principles
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ISV31Fatty acid synthesis in fungal
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AMV008Structure and function of the
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pathway determination in digesters
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nearly the same growth rate as the
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the corresponding cell extracts. Th
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AMP035Diversity and Distribution of
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[1] Kennelly, P. J. (2003): Biochem
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[3] Yuzenkova. Y. and N. Zenkin (20
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(TPM-1), a subunit of the Arp2/3 co
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in all directions, generating a sha
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localization of cell end markers [1
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possibility that the transcription
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Bacillus subtilis. BiFC experiments
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published software package ARCIMBOL
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EMV005Anaerobic oxidation of methan
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esistance exists as a continuum bet
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ease of use for each method are dis
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ecycles organic compounds might be
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EMP009Isotope fractionation of nitr
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fluxes via plant into rhizosphere a
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nutraceutical, and sterile manufact
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the environment and to human health
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EMP049Identification and characteri
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EMP066Nutritional physiology of Sar
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acids, indicating that pyruvate is
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[1]. Interestingly, the locus locat
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mobilized via leaching processes dr
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Results: The change from heterotrop
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favorable environment for degrading
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for several years. Thus, microbiall
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species of marine macroalgae of the
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FBV003Molecular and chemical charac
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interaction leads to the specific a
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There are several polyketide syntha
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[2] Steffen, W. et al. (2010): Orga
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three F-box proteins Fbx15, Fbx23 a
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orange juice industry and its utili
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FBP035Activation of a silent second
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lignocellulose and the secretion of
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about 600 S. aureus proteins from 3
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FGP011Functional genome analysis of
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FMV001Influence of osmotic and pH s
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microbiological growth inhibition t
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Results: Out of 210 samples of raw
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FMP017Prevalence and pathogenicity
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hyperthermophilic D-arabitol dehydr
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GWV012Autotrophic Production of Sta
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EPS matrix showed that it consists
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enzyme was purified via metal ion a
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GWP016O-demethylenation catalyzed b
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finally aim at the inactivation of
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Results: 4 of 9 parent strains were
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GWP047Production of microbial biosu
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Based on these foregoing works we h
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function, activity, influence on gl
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selected phyllosphere bacteria was
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groups. Multiple isolates were avai
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Dinoroseobacter shibae for our knoc
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Here, we present a comparative prot
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MPV009Connecting cell cycle to path
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MPV018Functional characterisation o
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dependent polar flagellum. The torq
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(ciprofloxacin, gentamicin, sulfame
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that can confer cell wall attachmen
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- Page 264 and 265: 264 AUTORENBreinig, F.FBP010FBP023B
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- Page 274 and 275: 274 AUTORENWagner, J.Wagner, N.Wahl
- Page 276 and 277: 276 PERSONALIA AUS DER MIKROBIOLOGI
- Page 278 and 279: 278 PROMOTIONEN 2010Lars Schreiber:
- Page 280 and 281: 280 PROMOTIONEN 2010Universität Je
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