Transcriptional Characterization of Glioma Neural Stem Cells Diva ...

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stp = stR.IndexOf("results") st = stR.Substring(0, stp).Replace(",", "") ’ex. 18,700 –>18700 TextBox3.Text = Convert.ToInt32(Trim(st)) If TextBox3.Text "0" Then RaiseEvent nextGene() Exit Sub End If End Select End If pageLoadTimes += 1 End Sub End Class 272 Appendix
Appendix C Long ncRNAs We detected 25 differentially expressed long non-coding RNAs. Several <strong>of</strong> these display an expression pattern similar to a neighbouring protein-coding gene, including cancer-associated genes DKK1 and CTSC [113,461,551] and devel- opmental regulators IRX2, SIX3 and ZNF536 [412], suggesting that they may be functional RNAs regulating nearby genes [372] or represent transcription from active enhancers [230]. 273
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Transcriptional Characterization of
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This dissertation is my own work an
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Acknowledgements I would like to th
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5.9 External Dataset Expression Cor
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Introduction 1
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1.1 Glial Cells in the Central Nerv
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1.2 Glioblastoma Multiforme Introdu
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1.3 Primary and Secondary Glioblast
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1.4 Pathways Involved in Glioblasto
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1.5 Pathway Crosstalk Introduction
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Chapter 2 Neurogenesis Contents 2.1
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2.1 Radial Glia Introduction VZ adj
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2.2 Neural Stem Cells Introduction
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Chapter 3 Brain Cancer Stem Cells C
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3.1 The Cancer Stem Cell Hypothesis
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3.1 The Cancer Stem Cell Hypothesis
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3.2 Brain Cancer Stem Cells Introdu
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3.3 Glioma Culture Systems Introduc
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Chapter 4 The Non-Coding RNA World
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4.1 MicroRNA regulation Introductio
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4.1 MicroRNA regulation Introductio
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4.2 Target Prediction and Validatio
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Methods 93
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5.1 Tag-sequencing Data Processing
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5.1 Tag-sequencing Data Processing
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5.2 Array Comparative Genomic Hybri
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5.4 Quantitative Real Time-PCR Vali
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5.5 Literature Mining Methods Figur
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5.5 Literature Mining Methods How m
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5.6 Differential Isoform Expression
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5.9 External Dataset Expression Cor
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5.10 Glioblastoma Pathway Construct
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5.11 MicroRNA Target Prediction Ana
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Results 119
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6.2 Tag mapping Results Table 6.1:
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6.2 Tag mapping Results 123 Figure
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6.3 Copy Number Aberrations Results
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6.3 Copy Number Aberrations Results
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6.4 Core Differentially Expressed G
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6.5 Large-scale qRT-PCR Validation
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6.6 Literature Mining for Different
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6.7 Isoform Differential Expression
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6.8 Long ncRNA Differential Express
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6.8 Long ncRNA Differential Express
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Chapter 7 Dataset Correlation Analy
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7.1 Enrichment Analysis Results Tab
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7.1 Enrichment Analysis Results Fig
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7.1 Enrichment Analysis Results Tab
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7.2 Glioblastoma Expression Signatu
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7.3 Tumour Expression Correlation R
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7.4 Survival Analysis Results Table
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7.4 Survival Analysis Results 867 g
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7.5 Glioblastoma Pathway Analysis R
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8.1 Principles Results say, this is
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8.3 Databases Results Figure 8.1: O
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8.3 Databases Results Figure 8.3: W
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8.4 Filters Results Bayesian method
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8.5 Target Prediction Ensemble Anal
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Page 229 and 230: 9.1. Digital Profiling of GNS Cell
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Page 277 and 278: End Select End If End Sub Appendix
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Page 283 and 284: C. Long ncRNAs Appendix Tag Accessi
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Page 295 and 296: E. Exon Array Data Appendix Average
Page 309 and 310: F. MicroRNA Array Data Appendix Tab
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Page 323 and 324: Bibliography [1] Cell signaling tec
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[523] T. Watanabe, A. Takeda, T. Ts
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