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4 - Central Institute of Brackishwater Aquaculture

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National Workshop-cum-Training on Bidnformatlw and Information Management in <strong>Aquaculture</strong><br />

Multigene families (for instance genes coding for different, but similar,<br />

isoenzymes) may cause problems and it needs careful decision to exclude or<br />

include such sequences in data set and peculiarly looking phylogenetic trees [21.<br />

Some terms Associated with Phylogeny<br />

Phylogenetic tree: A graph that illustrates the evolutionary relationships using<br />

nodes and branches.<br />

Node: It represents a taxonomic unit. This can be either an existing species or<br />

ancestors.<br />

Branch: It defines relationship among the in term <strong>of</strong> descent and ancestry.<br />

Branch length: It represents the number <strong>of</strong> changes that have occurred in the<br />

branch.<br />

Methods <strong>of</strong> Phylogenetic analysis<br />

There are two major groups <strong>of</strong> analysis for studying phylogenetic relationships.<br />

Phenetic methods<br />

Cladistic methods<br />

Cladogranis and phylograms<br />

&tm8 1<br />

8.CI48 2 CLubg~8 show<br />

€Wetma 0 bmchkg mder -<br />

EuCmymo 1 bmoh kngtb<br />

Eur.ryot.2 us nrdnglcss<br />

EuLuyota 3<br />

(Fig-2)<br />

There are a lots <strong>of</strong> online tools for phylogenetic tree construction , but among<br />

them Phylip, Paup and MEGA are most widely used due to its user-friendly ness<br />

and reliability.

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