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Advanced Techniques in Diagnostic Microbiology

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50 Y. F. Wang<br />

by a carbodiimide conjugation method (Staros et al., 1986) such as 1-Ethyl-3-(3-<br />

dimethylam<strong>in</strong>opropyl) carbodiimide EDC coupl<strong>in</strong>g method to beads of uniform<br />

size, which are colored with different amounts of red and orange fluorescent dyes<br />

(<strong>in</strong> a unique ratio) to allow for discrim<strong>in</strong>ation based on the relative emission <strong>in</strong>tensities<br />

at the wavelengths of the two fluorescent dyes. Currently, there are 64<br />

different ratios of red and orange fluorescence, which identify 64 dist<strong>in</strong>ctly colored<br />

sets of microspheres. Differently colored microsphere sets can be <strong>in</strong>dividually<br />

coupled via the surface carboxylate moiety to a specific probe for a unique target.<br />

The flow cytometer analyzes <strong>in</strong>dividual microspheres by size and fluorescence,<br />

simultaneously dist<strong>in</strong>guish<strong>in</strong>g three fluorescent colors: green (530 nm), orange<br />

(585 nm), and red (>650 nm). Microsphere size, determ<strong>in</strong>ed by 90-degree light<br />

scatter, is used to elim<strong>in</strong>ate microsphere aggregates from the analysis. All fluorescent<br />

molecules are labeled with a green-emitt<strong>in</strong>g fluorophore. Any green-emitt<strong>in</strong>g<br />

fluorochrome can be use as a reporter; however, each fluorochrome has a characteristic<br />

emission spectrum, requir<strong>in</strong>g a unique compensation sett<strong>in</strong>g for spillover<br />

<strong>in</strong>to the orange fluorescence channel.<br />

Antigen-conjugated microspheres are added to the well, <strong>in</strong> the sample, as well<br />

as the fluoresce<strong>in</strong>-conjugate [red-phycoerythr<strong>in</strong> (R-PE) through biot<strong>in</strong> and streptavid<strong>in</strong>]<br />

antispecies detector or secondary antibody (Jones et al., 2002). The red<br />

laser excites specific dyes to identify the analyte [red and orange fluorescent dyes<br />

(detected by FL2/FL3]; the green laser excites a different dye to quantify the result<br />

(a green fluorescent reporter dye FL1) (Vignali, 2000; Mandy, 2001). The<br />

fluorescence emission of each bead of the specific antigen was determ<strong>in</strong>ed with a<br />

fluorescence-activated cell scanner (FACScan, Becton-Dick<strong>in</strong>son, San José, CA,<br />

USA), a benchtop flow cytometer (multiparameter flow cytometer that is based on<br />

a s<strong>in</strong>gle 488-nm excitation laser), with FlowMetrix hardware for data acquisition<br />

and analysis (Lum<strong>in</strong>ex Corp., Aust<strong>in</strong>, TX, USA). The software allows rapid classification<br />

of microsphere sets on the basis of the simultaneous gat<strong>in</strong>g on orange<br />

and red fluorescence.<br />

The Lum<strong>in</strong>ex <strong>in</strong>strument is a dual-laser flow analyzer. The first laser excites<br />

the fluorochrome mixture <strong>in</strong>tr<strong>in</strong>sic to the microspheres, enabl<strong>in</strong>g the bead identity<br />

to be determ<strong>in</strong>ed as the beads pass s<strong>in</strong>gle file through the laser path <strong>in</strong> the flow<br />

cell. The second laser excites the extr<strong>in</strong>sic fluorochrome (R-PE) that is covalently<br />

attached to the secondary antibodies. The dual lasers allow the operator to mix<br />

beads with different antigens together <strong>in</strong> a well of a filter plate, thus enabl<strong>in</strong>g<br />

multiplex analysis of different antibody specificities at one time. Orange and red<br />

fluorescence are used for microsphere classification, and green fluorescence is<br />

used for analyte measurement (Fulton et al., 1997).<br />

Contrast of These <strong>Techniques</strong><br />

The contrast with immunoassay techniques is shown <strong>in</strong> Table 4.1.<br />

ELISA assays are relatively <strong>in</strong>expensive, can be adapted for high-throughput use,<br />

and thus are commonly used <strong>in</strong> research and cl<strong>in</strong>ical laboratories. The enzymes

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