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The Development of Circadian Rhythms in Human Infants

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A random effect modell<strong>in</strong>g is an extension <strong>of</strong> l<strong>in</strong>ear regression, which has the<br />

advantage that with<strong>in</strong> the model itself, it is able to dist<strong>in</strong>guish between babies. It takes<br />

<strong>in</strong>to account the structure <strong>of</strong> the data, i.e. for the group <strong>of</strong> <strong>in</strong>fants who had data, each<br />

<strong>in</strong>fant was observed on a number <strong>of</strong> occasions on different weeks. It was used for the<br />

more complex aspects <strong>of</strong> the analysis and was done by a specialist statistician,<br />

follow<strong>in</strong>g expert advice which was sought as to a suitable method to analyse the data<br />

set. It is a hierarchical, multilevel, repeated measures modell<strong>in</strong>g (Field, 2009). It was<br />

used to <strong>in</strong>vestigate the change with age for several measurements for all <strong>in</strong>fants. <strong>The</strong><br />

measurements <strong>in</strong>cluded melaton<strong>in</strong>, cortisol, <strong>in</strong>fant sleep and circadian gene expression<br />

data (see sections 5.1.1, 6.1.1, 7.3.2 & 8.3). <strong>The</strong> data were fitted us<strong>in</strong>g STATA, a<br />

comprehensive statistical package.<br />

In the first part <strong>of</strong> the random effects modell<strong>in</strong>g an average <strong>of</strong> each <strong>in</strong>dividual baby<br />

slope was taken and it was assumed each <strong>in</strong>fant had the same slope ANCOVA<br />

(analysis <strong>of</strong> covariance). <strong>The</strong> height <strong>of</strong> the l<strong>in</strong>e (<strong>in</strong>tercept) was calculated separately<br />

for each <strong>in</strong>fant‟s data; and an estimate <strong>of</strong> the slope given. In the next step <strong>of</strong> the<br />

modell<strong>in</strong>g, the slope <strong>of</strong> each <strong>in</strong>fant rema<strong>in</strong>ed the same for each <strong>in</strong>fant, however the<br />

estimates <strong>of</strong> the height <strong>of</strong> the l<strong>in</strong>e or the (height) <strong>of</strong> the y-<strong>in</strong>tercept were adjusted to<br />

give an <strong>in</strong>herent estimate <strong>of</strong> the amount <strong>of</strong> gene expression per baby at a given age<br />

and a presumed normal distribution was drawn.<br />

<strong>The</strong> f<strong>in</strong>al step was an extended random effects model which allowed the slope to<br />

change for each <strong>in</strong>fant. <strong>The</strong> height given (y <strong>in</strong>tercept) was normally distributed and<br />

the slope given was also normally distributed for each <strong>in</strong>fant. It was then possible to<br />

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